Array 1 9822-2644 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMUO01000069.1 Zobellella denitrificans strain ZD1 NODE_70, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 9821 29 100.0 32 ............................. CTGTCGGTACAGGCGGGTTTACCGCCGCCACC 9760 29 100.0 32 ............................. GTATCAAACTGCGTAGCCTCGTCGGCGAACTC 9699 29 100.0 32 ............................. CAAAATTGCAGTTTTCAGGCCACTCCACCCCA 9638 29 100.0 32 ............................. CGCATCATGAAGTAATTAAATGCCCCCGCAAG 9577 29 100.0 32 ............................. ATTGCAGCATGCCCTTTAGCCCCTGGCCGAAC 9516 29 100.0 32 ............................. TGATGTTTGTGGCGACTCTGGACGGGCGTACC 9455 29 100.0 32 ............................. TGGTTGCTACCCGCGAGGTCACGCCCCGCGAC 9394 29 100.0 32 ............................. CGGATTAATAAGCCCGTTAATCGCAAGAGTAA 9333 29 100.0 32 ............................. CATTCCAACCCCGTTTGCGCACCAAACGAAAC 9272 29 100.0 32 ............................. CATAACAGCAACGTCGCCATTGCGAGAAAGCT 9211 29 100.0 32 ............................. GCCACAAAGTAGCAATAGATTAAGAAGCGAAG 9150 29 100.0 32 ............................. TTGGTGGGCTTGGGTAACACGAACTGCTTCGA 9089 29 100.0 32 ............................. CGCGTGGTGGCCAACCGGGCACCTTGGGAATA 9028 29 100.0 32 ............................. TCAAAGCTGTATCTGGCCGACTCGAATATTGC 8967 29 100.0 32 ............................. TGATCCGCTCCGCCTCGGTGGCCGGTGCCGAA 8906 29 100.0 32 ............................. CGCGACTTGTACAGCGGCTACTGGCAACGGCA 8845 29 100.0 32 ............................. CTGTTCAACAATCCGCACCTGGAGTTCCGCCA 8784 29 100.0 32 ............................. GAGGGGTCCTGCAGGAGATGGTTTGGACTGTC 8723 29 100.0 32 ............................. CGCACAATGTGATTTTTCCACCAATGGATTAT 8662 29 100.0 32 ............................. GACAGGGAGAGCGCGCAGACGGCACAGCGCCG 8601 29 100.0 32 ............................. CGACGTCGGTCTGTATGCCCTACCGGGCATGT 8540 29 100.0 32 ............................. CCCAGCCGGCGCACCACGTCATTGAGCCCCTT 8479 29 100.0 32 ............................. GGATAGCCCGCTCGCCTTGGCCTAGTGGGTGC 8418 29 100.0 32 ............................. CGAGACTGGCGCAACCTGCCAACGTCTGAGCT 8357 29 100.0 32 ............................. GGAGCAAATCGAGCATACGGGGCCGGCTCACC 8296 29 100.0 32 ............................. CTGATGTTCCGGCGATACGAAAATTTGCAGAT 8235 29 100.0 32 ............................. ATTTGTGGCCACTCGCCTACCCTCCCATAGCG 8174 29 100.0 32 ............................. CCGACCGAAAAATCCACCTCCGCTGGCAGCGA 8113 29 100.0 32 ............................. GTCGGCTGATAGATGATCGGCGACGAATAGGC 8052 29 100.0 32 ............................. CTACCTGCTGCTGTGGGCCAAATACTGGGCGG 7991 29 100.0 32 ............................. GAGGTGGCCAGGGCTTCGTCGTCGAGACCCAT 7930 29 100.0 32 ............................. CGGTATTTTGGGGCGGTTTTCCGCCAGAATGC 7869 29 100.0 32 ............................. TCCGCCAAGGCCGCCGGCCCCAGGTCTTTGAC 7808 29 100.0 32 ............................. TGCTGAACGGCCTGAATGCCTTCTGGCTTGGT 7747 29 100.0 32 ............................. GTACGGGCCGAACGCGCCGCCCAGGTACAGGC 7686 29 100.0 32 ............................. TTTAGGAGCGGCATGCAGGCGCATTTCATGGG 7625 29 100.0 32 ............................. GTCCATTAAACCGGCGCCGTAGGGATTTGGAG 7564 29 100.0 32 ............................. TACTTCCGTGTCTTTCAGATTAGCCTTCGTCG 7503 29 100.0 32 ............................. AACCTGAAATAGTAGAACTGGTGTAATTAGCG 7442 29 100.0 32 ............................. GTTGAGTTCGTCGACCGCTATGTGGCGGCAGA 7381 29 100.0 32 ............................. CCTGTTCCTGGTACTCGCTCACCATCCACCAA 7320 29 100.0 32 ............................. GCGATACCAAACTGTTCTATCAGAACATGCTG 7259 29 100.0 32 ............................. GGCTTCAACCCGGCGGATCTTAGGGCCGCTTT 7198 29 100.0 32 ............................. TTACTGATAACGTTGAGGATAATTTTCGTATA 7137 29 100.0 32 ............................. CAGAAGTGGACGGCCGAAAGGCCGTTAACGCC 7076 29 100.0 32 ............................. TCCGCCAAGGCCGCCGGCCCCAGGTCTTTGAC 7015 29 100.0 32 ............................. TTACTGATAACGTTGAGGATAATTTTCGTATA 6954 29 100.0 32 ............................. GCCATGACTGCAGCGGCAGACAGTACGCTGTC 6893 29 100.0 32 ............................. CCGACTACTACATGGGCCAGCCCGAACTGCTG 6832 29 100.0 32 ............................. GAAAACTGTAGGTCGATTTATTGGGAATATCG 6771 29 100.0 32 ............................. GCGAGCGTGCGCAACGATACCTGGTGGTACAG 6710 29 100.0 32 ............................. GCCCGTGCGATCGCCATAGCGGTCAAAACCGC 6649 29 100.0 32 ............................. GATTGCCAGATTCGTAGAAGAGTCTGGCGGCA 6588 29 100.0 32 ............................. TTGTGGCGAGTTCAGTTACTGCTTGTGCATCT 6527 29 100.0 32 ............................. GTTGATTACCGCTGGATTTCTATATGACGTCG 6466 29 100.0 32 ............................. GAACCTGCATTGATGGCTGGCACCATTGGCTC 6405 29 100.0 32 ............................. GAGTGGACAACATCTCAACCCATCGGCGCAGA 6344 29 100.0 32 ............................. ATCAGCCAGGACGAGTTCAACGCAGCGGTTGG 6283 29 100.0 32 ............................. CATTATTGCGAGTCGGTATGGGATGTGGATCC 6222 29 100.0 32 ............................. ATGTAACGTGCTTGGGTGTCTTTGGTCAGCTC 6161 29 100.0 32 ............................. GGCACTCACGCCGGCGCCGACCGCCTGCAACA 6100 29 100.0 33 ............................. GGGCTCACAATGAAATATTTCGCTTTGGCGATT 6038 29 100.0 32 ............................. CAATAGGCCAGTGGGAGGATGACCAATGTTCG 5977 29 100.0 32 ............................. TCCGCCAAGGCCGCCGGCCCCAGGTTTTTGAC 5916 29 100.0 32 ............................. GCGGCCGAGGCCGCCGAGGCCCGGAAAGCCGA 5855 29 100.0 32 ............................. CCGGTGATCTCGCCCCAGTTGGTGACCAGCAG 5794 29 100.0 32 ............................. GCCGCCGAGGCCGACAAGGCCAAGGCCGAGGC 5733 29 100.0 32 ............................. CCGCTGGACCGGATTAGGGTGGTGACTTCGTT 5672 29 100.0 32 ............................. CCGATTCCTACTGCAAGATCATGAAAAATAAG 5611 29 100.0 32 ............................. CGGGCATTATGAGCGTTGCGATAACCGCTGGT 5550 29 100.0 32 ............................. CGCACAATGTGATTTTTCCACCAATGGATTAT 5489 29 100.0 32 ............................. GAGGTTGAGCGGCTGCTGTCGCGGATGGAGCC 5428 29 100.0 32 ............................. CGGACTGCTCATCCGGAGAGAAAAACGCATCA 5367 29 100.0 32 ............................. CGTTGCAATCTGTGCGCAATGATGTTGAGCCG 5306 29 100.0 33 ............................. GTCATGGTTTCGGAAGCGTCCGGCAGTTGCTCC 5244 29 100.0 32 ............................. TCGGCACCGGCACCCTGGCGGTAGGCGATCTG 5183 29 100.0 32 ............................. TAGGTTATCAGCAGGGAGGCGCCGTAACCCAG 5122 29 100.0 32 ............................. CGATCTGGTTGAGGATAGTTTTCGCTACCGCG 5061 29 100.0 32 ............................. CAATTCCGCATCACCAACATGCGCGGCACCGC 5000 29 100.0 32 ............................. AATGGTCTACCAGGGCGCGGGGAGGAGATGCG 4939 29 100.0 32 ............................. TCATCAGCGAGGACTACCCACACGGCATCCAT 4878 29 100.0 32 ............................. ATAATCCGCCTGACCCTGGGCAGTCTCACGGT 4817 29 100.0 32 ............................. TAATATTGCGGCATGCCTGATAATCCAAATCG 4756 29 96.6 32 ............................A CCAACACCGTAAAATCGCCGGCTACCGCGAAC 4695 29 100.0 32 ............................. GGGCTGGTTGGCCCCTTTCCCACATGTCCTTC 4634 29 100.0 32 ............................. CCGGCCTTGTCGTGGTCGGGCGCGGCGATAAA 4573 29 100.0 32 ............................. TTGTAGGCCATGTCCCGCTCGGAGGTGGCAAT 4512 29 100.0 32 ............................. GCAACTATCAGTATTAACATCATAACGCCGGG 4451 29 100.0 32 ............................. GATATTGCGGTGATCAACGTCGACGGCACCCT 4390 29 100.0 32 ............................. GGCTGCCGGCCTCTGCGGTACTTGAGCAGTAC 4329 29 100.0 32 ............................. CAGAAGCCGCCGCCGAACGCGAGAAGCTGGTC 4268 29 100.0 32 ............................. GTCGTCCAGTAGCGCCTGTAGCTGTTCGATTC 4207 29 100.0 32 ............................. TTTTTCGGCGGCTTCCAGGTATGCCACCTGCT 4146 29 100.0 32 ............................. CTGATGGTCAGCTCGGCCTTGATGCCTTCGAG 4085 29 100.0 32 ............................. TTGGTTTCCACCTGGGAGCTGGAAACGGGCAG 4024 29 100.0 32 ............................. GTGGTCGGCGTAGCGCATCAGCTCGTAGTAAT 3963 29 100.0 32 ............................. TGCGGGTACTGACGGGCCAACCGCCAATAGAC 3902 29 100.0 32 ............................. TCAGGTTCAGACTCACCGCGCCCGGCTGCGTA 3841 29 100.0 32 ............................. CATGGTTGGGATATCGCGTTGCAAATCCAGGA 3780 29 100.0 32 ............................. GTGGCCAACGAAATCAGGGAGTGGCTGGAGGT 3719 29 100.0 32 ............................. GGCTTGATCCGCCGCGCCGGAAAGAAAAAGGG 3658 29 100.0 32 ............................. ATGTGATCCATGTTCAGGCCCATAGCCGAATA 3597 29 100.0 32 ............................. GTTTACAGCCTGCCGCCGGAGCTGCGTGAGCA 3536 29 100.0 32 ............................. GCGTAGCTGCGTACCCCGGAGATGGAAAACAG 3475 29 100.0 32 ............................. TTTGCGTGATAGTCTGCCACGCCCGTGATGGG 3414 29 96.6 32 ............................C GCGGCGGCCGGGTGCTCGACGAGTTCGCTCTG 3353 29 100.0 32 ............................. TCGATGCTGCACAGCGTTGTTTTCGGCACCCC 3292 29 100.0 32 ............................. CAGAGCCCATTCTCCGGGCTCTGTTGCTTCTA 3231 28 96.6 32 ....................-........ TTGGCGGTATAGCACCTCCTTGATTTGCTCGT 3171 29 100.0 32 ............................. CCCACTTGGATTACGCCCACTTGCATGGCCTG 3110 29 100.0 32 ............................. CCGCCGTCAAAAACCAGCTTTACAACAACTAC 3049 29 100.0 32 ............................. GCGTCGAAATCACCCTGATCCATGCCGGCGCC 2988 29 100.0 32 ............................. CATATGAGATCGACATCATGAGCGGCATGACC 2927 29 100.0 32 ............................. TTGTAGAGGAAACCACCAGTATCGCGTTTGTC 2866 29 100.0 32 ............................. GGCCCCAACAACGACCAGCCCGGCCGGCAAAT 2805 29 100.0 42 ............................. GTGATGCGCGCCACCCGGGTGCCTGCAGCCAGCCGTTCCCCG 2734 29 93.1 33 .A.G......................... GTGTGGGATCTGGGGCTGAACGGCCATATCGAC 2672 29 82.8 0 .........A......T..A.....T..A | ========== ====== ====== ====== ============================= ========================================== ================== 118 29 99.7 32 CCGTTCCCCGCAGGCGCGGGGATAAACCG # Left flank : CTTGTTGAAGAGGTTCTGGCCGCAGGGGGTATCGAGCCGCCACCGCCGCCAAAGGATGCTCAGCCCATCGCCATCCCGGAACCCAAGCCCCTGGGCGAAGACGGACACAGGAGCGGCTGACAATGAGCATGCTGGTGGTTGTGACCGAAAATGTACCGCCCCGCCTGAGAGGACGCCTGGCGGTGTGGCTGCTGGAAGTGAGGGCCGGGGTTTATGTGGGCGATGTATCCAAGCGTATCAGGGAGATGATTTGGGAGCAGACCACCGAACTGGCCGAGCAAGGCAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCCGGTTTTGAGTTCCAAACCCATGGCGAAAACCGGCGTATGCCGGTGGACCTGGATGGTCTGCGGTTGGTCTCATTCTATCCTATTGAAAATCAATGAGTTAGTGATCTTTAACAAAGCGGAATTATTGGTGGCTTTTTCTTTCCTGGAAAAAGCCAACTAAATCAGTTATATACCTTTAGT # Right flank : GCCGAATCTTGTTGCATGGAGTGCGGGTCTTGTTCTACGCCGGGAGGGCTGGACACGGCGGGCTTGTCCGCCCGGGTCTGCAGGGAGAAGGGCCCGGCGCAGCATGGGTTACCCATATCTCGCTGCCGCCACAGAATGTTTCCCGCTGCGCGGGAAGGCAGGCGGGCCGCCTGCGCTCCGGCGGGAAGGCGAAAATCTGCGAAAGGCGGTGTTTGCCTGCCAGTCAAGGCGGCGGGCGTACGGCGCCGGGTTGAGTTGTAAACCATCGGTTGCTGCGGCGGTTCGTTCACCTCCGGTGCGGGGATAATCTGTACCGTCGGTGCCGGTGCGCTGTATCCAGGTCCCATTTCCCGCAGGCGTGGGGATAATCCAGCCGAATCTTGTCGCATGGAGCGCGGGGCTTGTCTTCCGCCGGGAGGGCTGCACGCGGCATGCTTGTTTTCCGCAGAGGGCGGCCCGTCTGCATGGTGGTCTACCCCCTGTTTCCCGCTGCGCGGGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCAGGCGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGTTCCCCGCAGGCGCGGGGATCAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //