Array 1 6622-7199 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCA01000023.1 Parasutterella excrementihominis strain BIOML-A13 scaffold23_size38311, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6622 29 100.0 32 ............................. TATTTGCTTCCAGCGGGGACATTGGGCGTCCT 6683 29 100.0 32 ............................. ATCCTTATCCTTTTGTTTTAGTCCGGGCAAAT 6744 29 100.0 32 ............................. ACCGAGCCGATGATTAACCTCATCATCTCAGT 6805 29 100.0 32 ............................. GAAGATTGCATTAAACATAATGTCGAGAAGTA 6866 29 100.0 32 ............................. ATCACCACCATGAAAGGTAATCCCCTGCTAGT 6927 29 100.0 32 ............................. GTATCGTTGCCGAGACCGGCGCGTTTGAACAC 6988 29 100.0 32 ............................. ATTGAACCGGTCATTTTGTCCCGAGTCGATCC 7049 29 100.0 32 ............................. GCAAACATGGACGCACCTGAGATTGCACGTCT 7110 29 100.0 32 ............................. CGTAATGTATATACGTTCAACTGTTTATTCAG 7171 29 86.2 0 ............C...........GTT.. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 98.6 32 GAGTTCCCCGCGTAAGCGGGGATGAACCG # Left flank : GATTCGAGGATCCGAAATTTTTCACTCGTGAGTACAAAGACTATTTTGGTTTGTCGCCTCGAGAAAATATAAAAAAGATAAGAGCAGAGGAGGGCATCAATTAATTTTTTAGTGGAAAAATCTAGCAGATTTCGAAGAAAGAATTTCTTGGCAGCTATGGGATTGGTTGGTGTGACGCAAATAGGTCTCAGAAAATTTGTGAGCATCCCAACTTTAAATAATTCTGATAGAATCCCTCCTTCCAACGGAAGGATGGCAGAGTGGTCGAATGCGCCGGACTCGAAATCCGGTATACGGTTATACCGTATCGAGGGTTCAAATCCCTCTCCTTCCGCCATTTTTCTACTTAATGCCCCGTTAACACATTTTCTCCTCTCTACGCAGGCTTCGGTATTTCAGAGAAAACTGATAGTATCTTTAGTAGCTTTGTTCTTGTTTAGAAATGTTCTTTAAAAGCTTAGCGGTAAGCCGATTAGTGTAATGTTGTAACCATTTTAAGT # Right flank : GGACTTACCCTGCATGAAGGTAATGCTGGAGAGTTCTCCGCTCGAGGAAAATGATTGTCAGAAGCTTAGAAATTACCTAGCTTTTCCTGTTCTGAAGAGAGGGTAAGGTCTTAGATTTTTTCCTTTTTAATTTGAAGCGATTCAATTGAACTTTTCAAAAGGTAAGGTTTCCTTGTGTACATTCAATTAGCAAACTAAGTAATTCTACTTTGGTTTTGGTTGGATCGCTTCGTTGTAAAATCTCAAAATAAATCAAATTCAACCCCTTGACAGCGTCCTTTGTATATATTGGAAAGATTGTATTGTTTCCTCGAGGGTTCGAGCCATGGAAATGGACCTAACAACTAGAATTATCGCCATTGTTGTTCTCATTCTTTTCAGCGGTTATTTCTCTATGGCAGAGATTTCGCTAGCCGCATCTCCTAAAGTTAAATTGCATCAAGCATTAGATGCGGGGGATAAACGAGCACAAAAAGTGCTGGATCTTCAAGTTAAACCAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGTAAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 6864-7988 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCA01000024.1 Parasutterella excrementihominis strain BIOML-A13 scaffold24_size34375, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 6864 29 100.0 32 ............................. AAGGACGCTAAGCCTCAAACAAAACTCGACGC 6925 29 100.0 32 ............................. CCAAATCGGGCGGCTGATACACAGCTTGAAAT 6986 29 100.0 32 ............................. ACAAAGAGCATTTTGGGATAGTGCTCAGGCAT 7047 29 100.0 32 ............................. TCCATTACGGCAACCGCTGCTATCGGCGCCGG 7108 29 100.0 32 ............................. TAAACATCGAGGCTAGATTCTCCTGGAATCTG 7169 29 100.0 32 ............................. TCGATTTGGCTCCACTTGGCCTCTCTTGCCGT 7230 29 100.0 32 ............................. CTGAGACGGTTGACGGGTCAAAATCAACTCTA 7291 29 100.0 32 ............................. CGAGAACGAGGTTTTAAATGGTGCTCAATGAG 7352 29 100.0 33 ............................. CTCAATGAACAAAAAAATGAAATGAATTTCGGT 7414 29 100.0 32 ............................. ATCAACGGATCATTGATGAGGCCATCCGGAAA 7475 29 100.0 32 ............................. CTAACGATTTTGTCAGAAAATGAGCCTACTGC 7536 29 100.0 32 ............................. GAAAGGTACAACGAGATCTGCACATATCGAGA 7597 29 100.0 32 ............................. TATTGGAAGGCGCCCCAGGCATAGATTTAGAG 7658 29 96.6 32 ............C................ GCACAAGCCCGCACGAATATCGGAGCCGCCAA 7719 29 96.6 32 .................T........... GTCAGCAACGTAACCTAGACGATCTAAATCCT 7780 29 96.6 32 ............C................ TCCAACTGGACAATGGCCCACGACGGCTTAGA 7841 27 93.1 32 ...........--................ ACTGATTGATGTTGAAAATCCAACAGCTATGC 7900 29 79.3 33 ........T...C.....A..GC.G.... ATGGATTGGGTCATCGATCATCTCGATGTCAAA 7962 27 86.2 0 .........A.--...........G.... | ========== ====== ====== ====== ============================= ================================= ================== 19 29 97.3 32 GAGTTCCCCGCGTAAGCGGGGATGAACCG # Left flank : AGAAGAGTTTTTTCTCGTGTCTCACTGGTTCCTGGTTCAAGTCCAGTTGAGGCCACCACCTTCTTAATTCTATTTATGACAACGCCTCAGTCTTTTGAGAAGGAAAGGTTAAAAACGAATCATTAGAAGTTCTGATAGAATTGCACTTCTGCACAATGGTGATCTCTTCATCATTAGGCCCCATAGCTCAGTTGGTTAGAGCAGTCGACTCATAATCGATTGGTCACTGGTTCAAGTCCAGTTGGGGCCACCACCTCATCTATTAAATCCAATTAATTGAAGTCAGGATGGAACAGATTCTGAACCCCGGCCTTCTGTAAACGTTATTATCCTCTTTCAGGTCAGCAGAGCATTTGTCTTTGAAATTAAATGGCTCTGAAATTTTCTAATCCAGGGAACTGTTCTTGAAATGATTCAAAACAGTCTCAGGGTTCTTTGCATATTTTCCCGATAGGAAATCTTTGCTAGAGTTAGTAAGGTGCTCTATGCCTTGTTTAAGT # Right flank : GTGGATTCAGCAATAATTCAAGAAGACCTCCGCTTCTTTCCTCATTATGTTATTGGAGGGGTTGATCGAAAAAACAATTTCTTCTTTCCCTTTACTGCTGAGTTGTACACGTACATGGAAGTGAACCGTAATGATGGATTTTTCAACGGTTTAATTTCAAGTACTAGATGAACCGTAGTCACTTACTGTCTTAGATATTGTTGTTGGAAATCCTTCTGCGAAAAGAGTCGGAATTGATAGAAACTATCTTTCTATTCGTATTAATTCACTATCATCTCCAAAGCCTTTTAGGCTTCTCTTTCTAATTCGAAAAAGAAGGTTTTGCTCAAGAATTTAGTGCGCTAAAAGTATTAATAAAATCACAATATTGATTAAAGAACATACCTTCTATCAGCCAGATGGCTTTGAAGGATGAAAGCTCATCACCCATTGTGCCTATTCATGGTCGAGCACAATAAGCGCAAGTTCTAGAGTTGTAGAATGTTTCTTTTGGGATTTTT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGTAAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 826-358 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCA01000034.1 Parasutterella excrementihominis strain BIOML-A13 scaffold34_size32454, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =========================================================== ================== 825 27 100.0 43 ........................... CGTTTTGTCTGCCGCATAGTTTGTGACATCGAAGGTTTCAGTT 755 27 100.0 47 ........................... GTTACTGGTCATCTTTTCTTCATCGTCATCATCGAATGGTTTCAGTT 681 27 100.0 59 ........................... NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 595 27 63.0 43 NNNNNNNNN..............C... GTGGCGACTATGCGTCAAGAATCAGCCGCGTTTTGTTTCAGTT 525 27 100.0 43 ........................... CCCACGGAAGCCGCGCAGATGACGCCCAAGGAAGGTTTCAGTT 455 27 100.0 44 ........................... CCCAACCGGAAAGGCCACAAGTCGTCTTCTTGAATGTTTCAGTT 384 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== =========================================================== ================== 7 27 94.7 47 GTTATTGAAAGAATGTACGATTGAAGC # Left flank : AATTAGAAAGTTTGAATATATTTATTTCAGTGAGTCCACAAATACGAGTCCATTTTTCAAAAGAATGTGGGTCGAAACAGTTTGAATGCTTTGTAGCTGCATTTCTCGACTTCTGTTGAAAGAATACGCAATTAAAGAGGAAACTATTTTCCTGACTTTGACTATCTGCTAAAAATTAGGCTGAGTTTGGTCAGGGGCGGAATTTTCCCTTTTTTGGAATGACGGAACGATCCTCTCTTTGAACTGAGATTGGATCGAAAGAGTAAGAAGGAAAGAGGCGTAACAAAGGGAGAGGTGACTTATTGTGCGATTTTTTAAGGCATTGATAGACGGGTTGCTTAATGGCTTAGCCACTATTTTCTCGGTTGTTATGTTTTTATTGCTTCTGCTTTTAATTTCTTTTAGTTTCTACTTCGTGTTTTTGACTTGATGTCTTCGTTTACATGCAAGGGTGCTTCGACGCCCTTTTTGTGTGGATTCCGGCAATAGTATGTGCTTCA # Right flank : CTCCGAAACCAACTGATTGAAAATAAACGATTTTTGACAGTTGGTTTCTGGTCTGTTTTTCGAAAATGGTCGATCTGCACAAAAAGTGCCATTATTTTCGAAAATTTGGGGTGATTGCTTGACTGTTTTTGATAGTTGTGGCAATATCTAGTTACATTCTTTCAACAACGAAATCGCCTTAGGGCGAGCTGAAATCAATTTGATTAAATATTAGATCCGGCTACTGAGGCCTCTTGGCCTTATCCGGATTAACAAGGAGCCTCTATTCGAGGCTTTTTGTGTGTGCGCTCGGCATGAGCGAACTCTACAGGGTGAAAGTCCCGAAGTGCGGGCGGTGGCGCCAAGCACATAGCCAAAG # Questionable array : NO Score: 2.78 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:-0.21, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTGAAAGAATGTACGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA // Array 2 7806-8054 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCA01000034.1 Parasutterella excrementihominis strain BIOML-A13 scaffold34_size32454, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 7806 36 100.0 35 .................................... GGAAGAACCTCATCCACAAAAAACGGGATGAGATA 7877 36 100.0 35 .................................... AAACTCCCCGGGCAGGTCGCTCGAAACGGCGGTTA 7948 36 100.0 35 .................................... CGCTAAATACACGCTCAACTCTGCTCAAATGCTGT 8019 36 97.2 0 ................T................... | ========== ====== ====== ====== ==================================== =================================== ================== 4 36 99.3 35 GCTTCAATACTACATTCTTCTAACAACTACTGAAAC # Left flank : GAGAAATTCCAAAGAGAGGTAAAGCAAGGGTTCATTCTTTACGGCAAGAAAGGCAAGAGCCTGCGCGTTGAATTCACGGAAGAAAGAAAAAAGAAAGTGATAGAAATAGCTCAAAAGATTATTAGTAGTTTCGAAACAGGCCTTCTTCCAGACTCCCCCGCTACTTCAGCACAATGCGGGCAATGCGAATTTTTGAATTTTTGCGGGGACCGCTTCTAGCAACACAAAAAGCCTCCTCGGAGGCTCTTCGTTAATCCGGATAAGGTCAAAGACCTCAGTAGCCGGATCTAATATTTAATCAAATTGATTTCAGCTCGCCCGAAGGCGACTTCGTTGTTAAAAGAATGTAATTAAATATTGCCAGAAATATTCTAAATAGTCAAGCAATCACCCCAATTTTTCGAAAATAACGGCACTTTTCGTGCAGGTCGACCATTTTCGAAAAACAGCTCCGAAATCAACCTATCAAAATCCTTTGTTTTCAAATAATTGAGTCCGAG # Right flank : CACGAGATCGACCGAGCAACCGAGAACGAAGGAGTAAGCTTCAATACTACATTCTTCTAACAACTACTGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATCAGAGCATCCGAGACGCTTCAATACTACATTCTTCTAACAACTACTGAAACTACTCCCAACTGCTTACAGACAAGGCGCTCATGTGCTTCAATACTACATTCTTCTAACAACTACTGAAACGATACATTGAAGTTTCTAAAAGATCCGCCTGTCACGTTTCAATAACTATTGAAACTCCAGTCCTCGGCGTTGAACTCGAACTCTAAGGTTTCAATACTACATTCTTCCAAGGATTACTGGAACTGTCTAGTGGCGTAGCCAGAATAATTTTCTAAAAAGTCTCCGAATCACATTCTTCTAACTGTCGCTGAGACCAA # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATACTACATTCTTCTAACAACTACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //