Array 1 2339726-2339338 **** Predicted by CRISPRDetect 2.4 *** >NC_005966.1 Acinetobacter baylyi ADP1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2339725 28 100.0 32 ............................ AACGCGCATAACCGTCAATCGCTTGCTCAATA 2339665 28 100.0 32 ............................ TCACTAGTACAGATGTCGGTTCCGCATTAAGT 2339605 28 96.4 32 .......A.................... TAATCCAGCAGATGGTACTGCACGTATCATGA 2339545 28 100.0 32 ............................ GTGATTGTTAATTTCTGGGTCAGAATAGCGAT 2339485 28 100.0 32 ............................ ATTCACCGTGACACGTGTACCCGCCGTTTCTG 2339425 28 100.0 32 ............................ TCTTGCTTCTTGAAGCTTATAAATCGCATCCA 2339365 28 89.3 0 ........................ACT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.0 32 CTTAACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATAACTAAAAAATGATTTGAGAATGGTTTCACCGCTTAATTTTCCACTGGCAATTGGGGTAAGTACGCCAATCGTTAAAATAATCACACCAACATTTAGGCCATGTTGCTGTAAAAAAGGGAAAAATTCACTTAAAGGTGTAAGCTTAAAAACAATTAATACGCCTGCAGCAATAGTTACCGCCGCATTTTGGCTAAAAATACCACAAGCCAGTAAAACGAGTAGAACCAGTAAATTGACATCAAATTGAGACATGAGCATGGTATGAATAGTTAGTTTTGCAGGAATGATTATTGTATAACGATTTTACCAACACTTGAAAAAGAAAGACTTTTTACAGTAAATTGAATATCTATTATACTGGCTTACCCCAAAATTTTAGACTCTTTAAAAAATCAATTTAAATCAAATGCTTATATTTTGACTTAAAAACTTTGGTTAGAAGTGAATTTGTTGATTTAAGTTTTTGATATTTCGACTATTGCTCAACAATATTTACT # Right flank : TTCAATCAATTGACTTAAAAAAATAAGTTACACTAGGATGTCTTTTTTATTCTGGATATCGATATGCTCTTGGAAAAAATGTTGCAGTCACAAGGTTTTGGTTCAAGAAAATACTGTCAGCAACTTATTAAGAACGGAGCAGTTTCGATACAAGATGAAATTCAAAAAGATCTAAAATATCGAATTCATGATTTAACTGATTTTAATTTTCAGGTTTTTGATCAAAATTACGTATATCGGGAAAAGGTATATATTATTTTAAATAAACCTAAAGGCTTTGAATGTTCTCATCAGCCACATCATCATCAAAGCGTATTCAGTTTACTGCCAGATTTATTAATTCAGCGCAATATTGCGGCTGTAGGGCGCTTGGATCAGGATACTACAGGGCTGTTGTTACTGACTGATGATGGACAATACCTACACACGCTAACGCATCCCAAGAAGCATGTTCCAAAGGTATATCATGTGGCTACGATTGATCCAATTACAGTTGATCA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTAACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2371799-2373084 **** Predicted by CRISPRDetect 2.4 *** >NC_005966.1 Acinetobacter baylyi ADP1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2371799 28 100.0 32 ............................ TCACACTGCACTTGCGATTGGGGCACTATCAA 2371859 28 100.0 32 ............................ AATGTCGTGAACACTCAGACAGGCGGATACCA 2371919 28 100.0 33 ............................ CGACAGAGCAAGACATCACTGATATGTCGAATT 2371980 28 100.0 32 ............................ GCAGTCGGACAACTTCAATCGAACGCATCATC 2372040 28 100.0 32 ............................ CTGCTTCTCGGTCATCCTTAAATCTGAATGAG 2372100 28 100.0 32 ............................ TCACACTGCACTTGCGATTGGGGCACTATCAA 2372160 28 100.0 32 ............................ AATGTCGTGAACACTCAGACAGGCGGATACCA 2372220 28 100.0 33 ............................ CGACAGAGCAAGACATCACTGATATGTCGAATT 2372281 28 100.0 32 ............................ GCAGTCGGACAACTTCAATCGAACGCATCATC 2372341 28 100.0 32 ............................ CTGCTTCTCGGTCATCCTTAAATCTGAATGAG 2372401 28 100.0 32 ............................ TTCCACCAATCAAGAGTGGATTGGTCAATAGT 2372461 28 100.0 32 ............................ AGTCGACCGCGAGACGGGAAAAAGTACGAACA 2372521 28 100.0 32 ............................ CGTAGACTGCCACCACCGCACCCCCATACATT 2372581 28 100.0 32 ............................ TCGCGCAATCCATCGCGAGGGGCCTATTCGAG 2372641 28 100.0 32 ............................ AATGAGAAAATCAAACCACCCATGATGATCGT 2372701 28 100.0 26 ............................ TACTCGAACTTGTCTGTCATATTGCC 2372755 28 100.0 32 ............................ TGAATACTCAAATGACAATAAACAGGATAAAG AC [2372758] 2372817 28 100.0 32 ............................ TGTGAACAAATCCGTTGTAAGCCGCGCCTTAT 2372877 28 100.0 32 ............................ ATTTAAAAGCCACTCATCTGACACACCTAAAA 2372937 28 100.0 33 ............................ TTATCGAAGTATTCTGCTTTGGGTGCGGCAATG 2372998 28 100.0 32 ............................ ACCAGAAATGATTCCAGATATTCCAGATGAAT 2373058 27 82.1 0 .C......T..............-..TC | ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.2 32 CTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : CCTAAATCATTAGGTGTAAATGCGATCTGCCGCTGAAGATTACTGATTTCAATCGTATCTGAGTCAATGAGGGTAATTTTGCCGACCCCAGCACGTGCAAGCAACTCAGCCGACGTACAGCCAATTCCACCCGCTCCAACAATCAAGACATTGGCAAATTTTAATTTTTCCTGAGCATCAACATCCCATCCATCTAGTAAAATTTGACGGCTATATAAATGCATTTCTGCATCGTTAAGCTCTAAATCCAGATTGTCCTGATCGTTCACTCGCGATTATCCCAATTTATGAATACTAAATTTATAACTATAATTATAAAGAGAAGCTTGTGTCGTGAGATGTTTTATTTTGACAAAAGTAAGCTTTTACCCCAATATTTTATTTACTCTTTAACAGCCAAATAAAATCAAAGACTTAGTTAAAGTCAAAATAAAATGGGTATTTCCATTTTATTTGCTTTAATGGATTGTTTATATTAATTATTTTTGCACTTTCTTACT # Right flank : CAAGTAAATTTTGATCAAACATTTAAAGCATATTAAAATAGTCACTTAAATTATCAATCAAACATTACTTTACTGATTCATATCAGTTTTTCTAACGATAGATAACAAAATTTTGAGTAAAAGAAATGACTGCATGGCAACAACTTGGGATAGAACCCACTACAAATTTAAGAGAAATTAAAAAAGCATATGCTGTAAAGCTCAAGCAAATTGATCAAGATACTCAACCAGATCAGTTTATTGCATTGAGAGAAGCCCTTCAAACTGCCCAATATGAAGCAGAATATGGACTGTTTGATCAAGAAGAGAATCAAGATTCTCTATTTAATGATGATCAGCCACTAAATTTTAATGAGCACACTGAATCCGCTCAAGAAAATGAAATCAATCAATCATCAGACACTTTACTTGAAGAAATTTATCTTGCCATTCAGCAACGTATCGTCGAGCAAGATATTCACTTCAATATTCGAGAAGCATTGCAAAAATTTGCTGATCAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 2448115-2453542 **** Predicted by CRISPRDetect 2.4 *** >NC_005966.1 Acinetobacter baylyi ADP1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2448115 28 100.0 32 ............................ GACACCAAAGGTAATAAAGCTATGAAAGAATA 2448175 28 100.0 32 ............................ TTTACTCTTATTATACTATTACCCCTAACCCC 2448235 28 100.0 32 ............................ TCCAGCTAAAATCGTTTGAGGGTGAAACTCCT 2448295 28 100.0 32 ............................ ATGATTTCGAAAGGCTCTCCGAGTACGTTATT 2448355 28 100.0 32 ............................ ATTCCCAGCATTCACGCTGAGTGCTTCGGCAC 2448415 28 100.0 32 ............................ TGTGCAGCCGTTTGGCGCGCCCCAGATATGCG 2448475 28 100.0 32 ............................ AGGAACCGTGGCAGATTGCGTTAATATGTTAG 2448535 28 100.0 32 ............................ TAACGATGGAATAACGTTCAAAGAATCTAACG 2448595 28 100.0 32 ............................ AATTCATGAAAGATCATTCGCTGTGTTTGGGG 2448655 28 100.0 32 ............................ ATTTGCCGCTTTGAATATTTGATGCACCTGCT 2448715 28 100.0 32 ............................ AAATCGATGAGGGACAACATCAGGCACTCGAC 2448775 28 100.0 32 ............................ ACAGGGCAGGGAAATAACCAAAAATCGATATA 2448835 28 100.0 32 ............................ GACATAGGAACGATATGAAGATGATTTTTTTT 2448895 28 100.0 32 ............................ ATCAAGCTATCGTCATTTGGCCGATACACAGC 2448955 28 100.0 32 ............................ TCTGCCATGCATACAATTTGATTTGGCTGCGT 2449015 28 100.0 32 ............................ AATCATCAATATCTTTTTGCGCTTTGCGTGAA 2449075 28 100.0 32 ............................ TCTCACGTACAAAAAAAAATCCTATTTGATGT 2449135 28 100.0 32 ............................ GCGATTGAATACCGATAGATCGGGGATATTAA 2449195 28 100.0 33 ............................ ATACACTACATTGAACTGCTCGGACTTAAGCAT 2449256 28 100.0 32 ............................ AAAAAAAGTGTAGCCAACTTCATACAGTTACC 2449316 28 100.0 32 ............................ CAGGTGGCAGCGTTCCATTTTCGGGGGCAAAT 2449376 28 100.0 32 ............................ AAAACCACATTATAAGGCTCGGTAAATGTGTA 2449436 28 100.0 32 ............................ ATGAAAATAAGCCCCAATATTGTCAGTGTTCC 2449496 28 100.0 32 ............................ GTTTCCGCGTCATTCGGGTACAGTTGCGACAT 2449556 28 100.0 32 ............................ TTGAAACCTATGAACTTTGTGTTATACGTGTC 2449616 28 100.0 32 ............................ CTTATCAAAATCGGTGGGATCTTTGTCGTACT 2449676 28 100.0 32 ............................ GAATTATGCTTTAAAAAATCCTTTCGCGGGTA 2449736 28 100.0 32 ............................ AATCCGATTTCTGCTGTTGCTGGGGTTAGAGC 2449796 28 100.0 32 ............................ ATGTACTATAAGTCACATGGTAAAGACACGAA 2449856 28 100.0 32 ............................ GAAACGTTGAATCCAGAACCAGCAATCCCAGC 2449916 28 100.0 32 ............................ AAACTGTGGAGCATTACATCTACCATACTGCC 2449976 28 100.0 32 ............................ TAAAACAGTCAATGTTAATTGGGGTGAACAAT 2450036 28 100.0 32 ............................ GCGGTAGCTGGCGCGGTGTTTGCGTTTTTTGG 2450096 28 100.0 32 ............................ TATAACTAGCATGTCAGAAATAAAACTATCCG 2450156 28 100.0 32 ............................ CGTTGGTACTGTTGCAGGTGGTGCATTGGGGA 2450216 28 100.0 32 ............................ GACTCCGCTACTTAAGAAAGAGAGCATAGGTG 2450276 28 100.0 32 ............................ TAGAAGTAACTTACGATAACATCTTTGGCGCC 2450336 28 100.0 32 ............................ TCAAGCATGTGATCACTAATGATTCGGTTTTT 2450396 28 100.0 32 ............................ TATACTCCTTATATGTAATTTACGCGTAAACC 2450456 28 100.0 32 ............................ CACTACATTTATACCCGCCGTTTACGCTCTTA 2450516 28 100.0 32 ............................ GTTTAATGTGGCGTTCAGGTCTTGTTCGCCAA 2450576 28 100.0 32 ............................ ACTCAGTTGACCAATCTTACTGCTTCACTTAA 2450636 28 100.0 32 ............................ AGAAGATTTGGTGGGCAAAAATATGGAATATA 2450696 28 100.0 32 ............................ ATTCTTAGCTGCATCACGCAAGATTTGCTTTT 2450756 28 100.0 32 ............................ CTCATCGAAACATACATTGAGAAAAATCATTT 2450816 28 100.0 32 ............................ AATCATCATCGACCGCAGTATTGAAGCGAAGC 2450876 28 100.0 32 ............................ AGCCCTTCGTATATTTGAATAGTGCATTGGCT 2450936 28 100.0 31 ............................ AAAAATACCCGCGCCCAAGTGATCCTGAAGA 2450995 28 100.0 32 ............................ AACCATATAGAATTGTTAACTTTTGTAAATAA 2451055 28 100.0 32 ............................ GATCAAAACAACAAGCGTACCAATGATGCCGA 2451115 28 100.0 32 ............................ ACAAGGGATGTATTGACCAGGTGTGAGCGCAA 2451175 28 100.0 32 ............................ ATTCTTGAGCCGCCTGCAGATTTGTTATGTCA 2451235 28 100.0 32 ............................ ATGGTTCGGGGTTGTAGCTGTACGCCCCAGAT 2451295 28 100.0 32 ............................ AAGAGCAAAAGGTAACTTGGATCTACCGCCAC 2451355 28 100.0 32 ............................ CACGGAAATTGGAATGATGATTTCGACGGTAA 2451415 28 100.0 32 ............................ TTGTTGAGCAGCAGAACGGCCTTTTACCAACC 2451475 28 100.0 32 ............................ AGATACCTCAGTCCAAGCTGCTGAATTTTATC 2451535 28 100.0 32 ............................ AAGAGACAACAGGGCTTATTAAAGTAACTTGT 2451595 28 100.0 32 ............................ AAGTTTTATTTAAGCCCAAAGCTAAAGATAGT 2451655 28 100.0 32 ............................ GTTAGCTGCACAAGCTCTGGGACTTTAATAAA 2451715 28 100.0 32 ............................ AATCGCTAACCAGTAGAACCCGCGTAGCAGCG 2451775 28 100.0 32 ............................ AAGCGTTGCGAGCGCTCAAAAAGTGGCTGATC 2451835 28 100.0 32 ............................ GTCTACCAAAGCGAAAGTATCATTTTCAATGA 2451895 28 100.0 32 ............................ TGTATCGGAGCTACGTCAGAAGGTCAAGCACA 2451955 28 100.0 32 ............................ AGGTCGATTTATCATAAACATCGGGCACGATA 2452015 28 100.0 32 ............................ GCCAGAAATTTTGACACTTGCGTTTAGCAATA 2452075 28 100.0 32 ............................ AGATTGTCTCTAAATTTAACGCGTGGCTTTGT 2452135 28 100.0 32 ............................ AAAGCCGAGCCCAACTTTTGACGCACAAAAAG 2452195 28 100.0 32 ............................ GTCAGTGATTGCTTTCATTGCCGTAGCTACGT 2452255 28 100.0 32 ............................ ATCCGCGCCCAATTTGTCCCACCAATCTTTTT 2452315 28 100.0 32 ............................ GATTCCATAGAACGTACCATTGACGCGCAACA 2452375 28 100.0 32 ............................ TGGATCTCTGCAGAAATCACATTGTCCAAATA 2452435 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 2452495 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 2452555 28 100.0 32 ............................ TGCGAGTTCAAACTTCTTTAAAGATGCAACAT 2452615 28 100.0 32 ............................ CGTGGAATCATAATCATAAGCTTCACCGACAC 2452675 28 100.0 32 ............................ GATCAGTGGCGCGTCTACAGTGAGCGAGTGGG 2452735 28 100.0 32 ............................ ATAATTGCAACAACAGCATAATATACATACCA 2452795 28 100.0 32 ............................ CTTACTTTCGCTTGCGCTTCGTTACGAATGCC 2452855 28 100.0 32 ............................ TCAACCAGGATCGGATAACCATCAATTCTAAA 2452915 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 2452975 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 2453035 28 100.0 32 ............................ CAAATGTAATCAGGATTAGTCGATTGCAGCGT 2453095 28 100.0 32 ............................ AGATCGCCTGTGCGTAGGTCAACTGCACCATT 2453155 28 100.0 32 ............................ AGCTGAACACGCCGTTTTTTAACTTCCGCCAT 2453215 28 100.0 32 ............................ ATGCACCTGATCCTGCCCAATGAGGGATTTAC 2453275 28 96.4 32 A........................... TGATGGTGCAGGAACCACAGCAACATCAGTCA 2453335 28 100.0 32 ............................ GATTGAAATACTATTAAGGCTGTTCGTAAAGC 2453395 28 100.0 32 ............................ ACACACGCTGCCAATTCTTCGTTAGAGTGTAT 2453455 28 100.0 32 ............................ AGCAGTAAAAGCCATGACCGTTAAGATCGCTC 2453515 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 91 28 100.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAGCACTGTATAAAGAATTGGCCAAAGGATTTAATATTGACTTTAAACGAGATGAAGGCAAAAACTCACATGATAGTCTTACCGATATTGCGAATAACTACTTAGATCATGGAAATTACATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGTATGGGAATTAGTTTTGCCCTACCTATCTTGCATGGTAAAACACGCCGCGGAGGTTTAGTGTTTGATCTTGCCGACTTAGTGAAAGATGCTTTTGTGATGCCAACTGCTTTTATATGCGCATCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAACTTATAGAAATATGCCAAGACCAAGATCTTCTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCAAACAATTAACTCAAGTGATTCATAACGAAGTATTTTTACTCATTAAAAGCTTATATAATTGATATCAAGGGTTTTGTTTTGACTTAACTCTA # Right flank : ATATTAAAAGCAACATCGATAAGATCTAGCTGTCCAAACTATCAAAAGTTGATTCAAAACTAACTTTACTTCAAATTTTTTTACAGACTCTGATCTTGTACTAAACTATTCATATATGCCACCGCAGCAGTACGGTTTTCGACACAAAGCTTTTCAAAAATATGTTCTAAATGTTTATTCACCGTTCTTGGGCTTAATTCCAAAATCTCGGCAATGTCTTTATTGGTTTTACCCAGTGCAAGCCAATGCGATACTTCGGCTTCACGTTGAGTCAATTGCGGGCAGTATTTTAAAATATCTTCTATACTCAATGCTGTACTGGAAATTTTGATTTGCACCAGATAATTTTTGGTCGTGCTTAAATCATCTTGCCAAGGGGTCAAAAGAATTAACTGAAGTTGCTGTGTCGAGGTAGAGTAAGTACAGCTCATACGTTTTTTATTGTCTTTGTCTTTTTTAATGTCTGCAAACCATTGCTTTAAGCCCAACTTAAAGCCCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //