Array 1 2112739-2120132 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011056.2 Saccharolobus solfataricus strain SARC-C chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================ ================== 2112739 25 100.0 37 ......................... TCACATCCCTCACAATCCATAATGAAAATGTCGGCAT 2112801 25 100.0 38 ......................... ATTTTAGCAATGCAATAGATCAACAATTGAAAGAAACT 2112864 25 100.0 39 ......................... ATTTTCATCTCTTGGATTGAAAATAAATGAATTTTCTTC 2112928 25 100.0 41 ......................... TGTTTCACAAATTTCAAACTTGCAAACGCAACAATTAAATA 2112994 25 100.0 40 ......................... GTTTTTGGTCAAATATTTGGACAACACTTACAAGAATTGG 2113059 25 100.0 38 ......................... TAGTCAACGACAAAGTGCTTAAAACCCGTGTTATACTC 2113122 25 100.0 39 ......................... GCTGTAATAGTCGCAATAGCAAAAGCCGAAACAATGAGT 2113186 25 100.0 41 ......................... CAATAGAATTTTTCTTAGTTGGCATTGACAAGTATAATTCT 2113252 25 100.0 40 ......................... CAAAATTCCAAACTTTGGGAATTTCTAGTTTCCAAATTTC 2113317 25 100.0 39 ......................... TTTAAACGCCTTGCAATGGTAGAAACATCAGTAGAAGAC 2113381 25 100.0 41 ......................... CGCTTTCGACTGCGACAACTGTCGTTTGGCTCATTTGTTGC 2113447 25 100.0 38 ......................... TTATTTCAAATACTATTATCTCCGCCATATGTTTACAT 2113510 25 100.0 38 ......................... ATTATCTGCAATTTTAGCAACTGAGAGGGCAATAATTT 2113573 25 100.0 40 ......................... TTTTTTCTTTAAAAGCTCTAGGCAGTTCATTTCTATTTCA 2113638 25 100.0 39 ......................... CATGCCAAATTTGTAATCCCTAGCTTGCTGAACAAAATA 2113702 25 100.0 44 ......................... AGTACTGATAATCTGAAGGTATTGGACTAGAACCCATGAAGTTC 2113771 25 100.0 37 ......................... GCTTTAACTTGGTACGCACTTTACGCCATGATAAACG 2113833 25 100.0 39 ......................... GAATTTTGTGTTACTGCAACGCCAAGATTTTCAAATGTT 2113897 25 100.0 36 ......................... GTTGAATTTTTGCAACTGGTATGTTGTATTTTTGCA 2113958 25 100.0 42 ......................... AATTTGTTACACGGCTAGGATTTTTTTTCCTAGATGTACAAT 2114025 25 100.0 38 ......................... TTCTAATCTTTTGCCCATTACTGCATCATATCTACTAG 2114088 25 100.0 38 ......................... ATCTTTACCTTTATATAAATCTTGTTCGTAACAAATAA 2114151 25 100.0 37 ......................... ACAAAACGAGGAGTTTATAGTAAAATCAACTATGAAA 2114213 25 100.0 35 ......................... ATTATTTGAAGAGAGGGTGAGAGAAGCATGAAAAG 2114273 25 100.0 36 ......................... AACTACAACGAGGTGAGAAACGATGACTAAACGTTT 2114334 25 100.0 38 ......................... TTTAACCAGCATAACAGCATCTAAAAGAATGGGAATTG 2114397 25 100.0 36 ......................... TAGATATATGGCGATGAATTGCATTAGTCAGTGGTG 2114458 25 100.0 39 ......................... ATTTTTAACGCTATGACGCTAGCCCTCATGTTAGCTTTT 2114522 25 100.0 37 ......................... AAAGTTTGTTCTTCTGTTTCGTTTTGTTGTTCTGACT 2114584 25 100.0 38 ......................... CCCCTTTTGCCGTCTTTTTAGTTACCACAATGCACCAA 2114647 25 100.0 39 ......................... CCGTATCCAGAAATAATTAACCAATCGCTTGTTTGTGAC 2114711 25 100.0 37 ......................... AAATTAACGTAAAGAGGGAATTTCTCGCACCTATCAA 2114773 25 100.0 42 ......................... GAATAAACATTGGTACTGTACTTTGTAGTACTGCATACGGTG 2114840 25 100.0 39 ......................... GCATCTGTCGGCAACCTCACTTATTCACGTGGGGGTGCG 2114904 25 100.0 37 ......................... TCTCTCAGAAACTCCCAACAAATTTGCTATTTGTTGA 2114966 25 100.0 39 ......................... TGCAATTTGTTGAATTGAATAACCTTTTCTAATTAGTTG 2115030 25 100.0 42 ......................... TTGAACTTGTAGAAATTGTTCATATGAAACAGCATAATTTTC 2115097 25 100.0 40 ......................... TTTACAGTTAATGGAATTCCTTTTTGTGCATACAATAACG 2115162 25 100.0 36 ......................... CTCATTATTTCATCATAAAGATTATCCACTGCAATT 2115223 25 100.0 39 ......................... ATGCATTCCACCTCTGTTTCTTCCTCTTTACGCATTTCT 2115287 25 100.0 36 ......................... CTCTATATTCTACTATCCTCCCTCTCTGCTCTGGCG 2115348 25 100.0 39 ......................... ATCTCTGATTTCTCAGTTCTCTAATTCCGAATACTACAT 2115412 25 100.0 41 ......................... TAAAACTGCTCAAAAATGCTAGAATTATAATTATGGCTATG 2115478 25 100.0 41 ......................... ATTTTGAATGTTACGACTCTCGTCATTTTTCCACCTCTTCT 2115544 25 100.0 36 ......................... GGAGTAATCTTTCCAGTCAAAAGACTTTCAGCCCTC 2115605 25 100.0 36 ......................... TTTATAAGCTTCAATAGAGCTTTATCTTGAGCAATC 2115666 25 100.0 39 ......................... ATAAATGGTACGTCTTCAGGCGGAAAGCCTTCCATTTGT 2115730 25 100.0 34 ......................... ATATTACCTTGCTGGATAAAGTTAATGATTTCAT 2115789 25 100.0 38 ......................... ATCTTTAATAAATCCTCCTTTATTCTCATGTAATGCAT 2115852 25 100.0 40 ......................... TTATATTACGATAAAAGTGCCAGATATGGTTGTTGGCATT 2115917 25 100.0 40 ......................... CCCACCAGAAAAAAAGAAGGGTGGGGGGCAAGGGCCCCGG 2115982 25 100.0 40 ......................... GCATATATTATTGGCTGAGGTAAGGTCGGCATATCTGTCG 2116047 25 100.0 39 ......................... CCATCCAAGCCTTGATTTGATATTCCTTTTAATGTCTGC 2116111 25 100.0 40 ......................... TTCATTATCCTCAATTTTTTCTATACCCTTGTTGTTCATT 2116176 25 100.0 39 ......................... CCCCACTGGAATGCACCATTTCTTGCAAGTAATACATTT 2116240 25 100.0 40 ......................... ATGCAGTTTGGCCTAAAGGAATATATACGTTAATGTCTGC 2116305 25 100.0 38 ......................... CCATTATTCGGCACTGCATTTAATTGAAGCACTATACT 2116368 25 100.0 39 ......................... AATATTTTGAATATTTGTACACCCATATGAAAAACGCAG 2116432 25 100.0 37 ......................... TATCTCTTATTCGTAAGGGTTAAAACAAAATTATCTT 2116494 25 100.0 35 ......................... TTTTTATTTAAGAACACTGATGGAAAGATCTATAG 2116554 25 100.0 37 ......................... ACCCATATTGAAGAGTTTGAGCATAAAAATGATTCTA 2116616 25 100.0 38 ......................... TGATTGCGTTACGTCACCATGGGGCTATTCGTTCTGAT 2116679 25 100.0 39 ......................... TTAATGTGAAGAAAATTGTTAAACGCGTTTTGCGACATT 2116743 25 100.0 40 ......................... CACTACATCTATTGTTTTTCCTTTTGTAAGACATTCCTCA 2116808 25 100.0 40 ......................... CTGTTATTACGTCTCTAATTGCCACGGGCTTAAAAAGCGG 2116873 25 100.0 39 ......................... ATCAATTTACGCCTTTTAGAAATCCAATTTCAATTATTC 2116937 25 100.0 42 ......................... GAAGCAATAGCCAACCCACAAAGCTGACACTATTCATTCGTC 2117004 25 100.0 38 ......................... GTATTCAAAAGAGAACTGGGGGATTCAAGGTAATACCT 2117067 25 100.0 36 ......................... CTCCGTAAGGCCCCCATACAGTAAAGTAGCAGTTTT 2117128 25 100.0 37 ......................... ATAGAAATATAAATCTCAGCAATTCTTGATATATTGT 2117190 25 100.0 36 ......................... TCCGTTATCATGTTGACTGGAAATGCGTTTAATAGT 2117251 25 100.0 39 ......................... ACCCACAGCACATTGCCATATCCACTAAAATTATACTGA 2117315 25 100.0 38 ......................... ATAAATATGTTAACGAATGTTGTAAATTGGTATTCGTT 2117378 25 100.0 38 ......................... AAAGGAATAATAAGCATGAACCGGGGAGTTCACGCTTT 2117441 25 100.0 38 ......................... TCAAACTCATGAAGCTACTGTAATCCATTTCACATAAA 2117504 25 100.0 38 ......................... ATCATTTCGTGAAATTTTCGCAACAAACGAAAAAAATT 2117567 25 100.0 40 ......................... ATTATATTGATAAATTGATAAGAATGCCCGAAAATGATTT 2117632 25 100.0 42 ......................... AAAAACTTTTCACATTCGACATTAAAAAATAAAATAATTTTG 2117699 25 96.0 39 ...............A......... AATTCGTATACCTTAGTAGTATTATCATCAATATTGTAT 2117763 25 100.0 39 ......................... TTCTCAATTGCCTTTCCCACGATAACCTCAATCCAGTAG 2117827 25 100.0 37 ......................... TCTACGTTGTTAAATTCATATACAGCTTGGCTCATAT 2117889 25 100.0 38 ......................... ACGTATTTAAATTTTTTGGTAGTACTTTCCTTGTGTAT 2117952 25 100.0 41 ......................... AGTATACAACAATGCAATAAGTGTTGATAGCTTTGCATCTT 2118018 25 100.0 40 ......................... CGCTTCTCCGTCTTTTCAGTTATAATGCGTAAAAGCTTAC 2118083 25 100.0 37 ......................... CAGCAAGAAGTTCACTCTCTACATCTTATGATTTCGG 2118145 25 100.0 36 ......................... CGTTTTCGTCTGGATTATTTATTATCTCTAAGCCCT 2118206 25 100.0 36 ......................... ACCTTTATTTTAAGTCCTAGCCTCTTCCCTATCCAT 2118267 25 100.0 38 ......................... TTGTTTCACCTCCTTATTAAAAGCGACAGACGGTCGAC 2118330 25 100.0 37 ......................... TCATTTCACTGTGTAGAGGTTGAACACCTAATTTTTT 2118392 25 100.0 40 ......................... CTTTGATTGTCCGCTCTCGTTCTTTTCCACACTGAAGATG 2118457 25 100.0 38 ......................... AGCTTTATGACACTCATTATCATATACTCAAAATTATA 2118520 25 100.0 40 ......................... TCGATTTTTTTCGAGGATGGATTTGTTTCATGAAAGAGCC 2118585 25 100.0 39 ......................... CAGCTCGACGATGACGAATACAAGATGCTGTATAATGCG 2118649 25 100.0 40 ......................... TTTCTCAACTGATCCACGGCTTCAGAGAAGATGTTTGGAT 2118714 25 100.0 39 ......................... GAACGAACATGGTAAGCCCTGAGGACCTTGAAAACGATG 2118778 25 100.0 40 ......................... CTCAGCAGATTTAAACTAACGATATTAATTGTACACACTG 2118843 25 100.0 39 ......................... TTAAGTTGTTTTGCTCTATTTAAAACAAAAATAATCCAA 2118907 25 100.0 39 ......................... CAAGTGCAATAGCAAACTACTACTAAATATAACATATAT 2118971 25 100.0 38 ......................... CTATATGGGGTCAGGGTGGAACTAAAATCGTGGCTTTA 2119034 25 100.0 39 ......................... CTTACTTAAGCCTAATATCTCCGCAACTTCATCAATAGT 2119098 25 100.0 41 ......................... GAACTCTCTATTGCTGACGAACTAAGAGAAAATTGTTTCAA 2119164 25 100.0 38 ......................... TCTAACAATGAATCTGTCATAAAGTGCCCGCAACTCTT 2119227 25 100.0 36 ......................... AGATTATCAATCAAGTGATAGAGATATTGCAATTTT 2119288 25 100.0 39 ......................... TGTTAGATACGGCAAGGCAAAGATTACAAACAAGGATGT 2119352 25 100.0 39 ......................... AAAATGGTGCTTATCGCTATTAGGTAGTCGGCGTTGTTT 2119416 25 100.0 36 ......................... ACTACTCTTACTTTTTGCATTCCTTTTGGAGTAGGC 2119477 25 100.0 39 ......................... TATTTACGTGCATAAAGAACATACCTCCAGCGCCTCCTC 2119541 25 100.0 37 ......................... TCGTAAACTTGAAACTGACCCGTATATCCGAATTTAC 2119603 25 100.0 39 ......................... GTATTATTCTCATAATAGGAACCGCCCTAGTGTATGCTA 2119667 25 100.0 37 ......................... CGTGATTACATGGAACATTACTTTTCCACCGAATATT 2119729 25 100.0 39 ......................... TTTATGTTTTCGAGTTCTTCTGGTCTTAACATCACTCTA 2119793 25 100.0 36 ......................... GTCAGTTATACGCTACATATGAAAAGATAAATGAAG 2119854 25 100.0 38 ......................... ATCTCTCTTAGTTTTGTCAAAGCTTCTGACCCGCTCCT 2119917 25 100.0 40 ......................... TCTATCTTTATTGTTACAACTTTTGCATACGACATAATTT 2119982 25 100.0 39 ......................... TCCTCTATCATCTCCTTTAAGCACTGTGTAATCTCACTT 2120046 25 100.0 37 ......................... TAATACTGCAGTAACGGTACAAGTCATTGACAGCGCT 2120108 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ============================================ ================== 117 25 100.0 39 GATTAATCCCAAAAGGAATTGAAAG # Left flank : GGTAAGAGCTGATGTATATAATCTTTTTGTATTTATGCATATATGATAAAACTTATTCTTAATTCTCAGATAAACGATTTTCATTATATTGGCGGTTATTAATTGGGAAAACAAACGTGCTTAAAAAGCTGTTTAAAAAGATAATGGTGCCTTAAAATGAAAAATTTATAATTGAAGTCGGAATAGTAGTAAACGATTATTTACGTGATGTAACGGTTTTATGAAAGTAAAGAGATAAAGAGAAAACCGGTTAAGTTCGTTTTCATGAAGTTGTTTAAAAGTGTGAAAGTTCGAGTCTCAATGCGACCGAAACGAATCTTTCTATAATAATTGAACGTTTATAAATGATAGGGTGTATTTCAATTTAACATAAAATCCTTGCGACCAGAAATTGTTAAATTAATTACAACTAAAATTGGTCGCATGAAGAGTAAAGGGTAGTCATGAAGATTTATAAGTAAGAAAAGAGAAAGAAAGATAGGAAGTATAAAAACACAACA # Right flank : GATATGGTATTCAGTAAATTCATGCTATAGTCAATTTCTTAGTAAGTGCGAAGAGAAATAGCTTTTGTCTATACAAAGAATACCAGTTAAATCCCTTAACCCACTTATTTCCAACATTCCCCATTTAATAGCCCTTTTTATTTCTTTGCAATTATTACGAAAAAGACTATATTTGCAAGTGCTCAAATGTTTCACGTCAAGAATCCGCAACTAACCCGTTCCCTAAGAACTAAGTATATTTTACACTTCTTTAAACTAATGGCTTACCATTGTTTGATGATGTGCATATCAAGTTATGATAAATCTTATAATGAGAATTCCAGCAAATTAAAAGAAGGCATTACATGCCTCGCCTCTAACAGACCTGAGTTCGCAACTGTAGGAAGGAATTTTGAGGGAAGTGAGGATATGGAAACAATATGTTTCCTTTTTGGCTACGTTACGATGAGAGTTACTTGAGATAAAAGAGTTATTAGTTTGCATTGTCTATCTATATAATG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATCCCAAAAGGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: F [matched GATTAATCCCAAAAGGAATTGAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.30,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2139118-2134655 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011056.2 Saccharolobus solfataricus strain SARC-C chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================ ================== 2139117 25 96.0 40 .........C............... CCATATTATTTGAAGATTGGGGATTTACTTTTTGGGATTG 2139052 25 96.0 38 .........C............... TAATATTCTTCCACTGAATCATCTTTAAACAAAAAATT 2138989 25 96.0 37 .........C............... TTTGCTAATGATTCACCTTCAATTTTCACCATATTAT 2138927 25 96.0 38 .........C............... GTACTTATGTGTTGATGCAAACTCTGCGAATAGATCTA 2138864 25 96.0 36 .........C............... ATCTTAGAGAATTCTGGAGTACCTTCATAATGTGGT 2138803 25 96.0 40 .........C............... GGAATGAGTTTAGATAGCTCTTCATCTATTTTCAAATCAT 2138738 25 96.0 36 .........C............... ATGCTAACAATGCTCCGATAATACCTCCAACTCCTG 2138677 25 96.0 40 .........C............... TACATTATTGTTAGTCGGTACAGCATTTATTTGGACAACA 2138612 25 96.0 41 .........C............... TATTATCCATATTTTCATTATACATTGCACTCAGAATTTTT 2138546 25 96.0 38 .........C............... AAGTCTCCCTCAATGAAAAACTGCGCACAAATTGAGTA 2138483 25 96.0 38 .........C............... CATTTCTTCCTCATTTAGTTCGTCTTTTTCCTGTAATT 2138420 25 96.0 38 .........C............... TGTGACACCTAAGAGTACGTACAGCGTTGGGAAGAAGC 2138357 25 96.0 35 .........C............... ATAATTATTCAAGATGCGATATTGTTTCAAATTTT 2138297 25 96.0 34 .........C............... CTCTAAATGGAATTTGAGAATTTAATATTTTATC 2138238 25 96.0 37 .........C............... AAACAACGCAGCAAAAACGAAGAAGATAACGACATAA 2138176 25 96.0 37 .........C............... GCAAGGGGTAGACCCGCGACCTGTGGGGCACGCACCC 2138114 25 96.0 39 .........C............... ATGTGTCCGTTCGGTGCGATGTATATTTGTACGTCTTTT 2138050 25 96.0 36 .........C............... GCGTTTCTCTCAGTGGAACTCAAGGGCAGACAATTA 2137989 25 96.0 39 .........C............... CCCGAATCCATTAGGTGTAGTTGGAACGAAATATATTAT 2137925 25 96.0 43 .........C............... TTAACCAAAATACACGTTTACCCAGATGGCACGCTGGCTAATT 2137857 25 96.0 36 .........C............... TTGATAGTCACAGCACCTGGGTCTCCATGATATAAT 2137796 25 96.0 39 .........C............... GTTCTAGGCCCTCCACTTTTCACGAGAAAATAAATATCA 2137732 25 96.0 40 .........C............... AATAAACTCTTTGCTTTGAACGGCCACTTTGTGGATTTAT 2137667 25 96.0 38 .........C............... ACATAGAAGATGTTAGCCTTTGAAATGGTTTAGCTAAT 2137604 25 100.0 40 ......................... AATGATATTGCATGGTTCAATAACTATAGAGAAACGGCGT 2137539 25 100.0 40 ......................... CTTTGTGTAAGTGATCGCTTGTACTCGCAATCTTAGCTTG 2137474 25 100.0 39 ......................... TTACTTCTGATGGCATCCTCAAATCTCGCAATTAGTGCT 2137410 25 100.0 34 ......................... ATAAATACTTAAAGACAATATACAGACCATTACC 2137351 25 100.0 41 ......................... AGAACCACACTATATCACTAGCCGAACCGGCAATATTAACA 2137285 25 100.0 39 ......................... GAACATTTCCATGATTTTATCACTAAACTCTTCCAAGTT 2137221 25 100.0 36 ......................... AATCCAACTGTAGCTAGCACGATTCTTGCTAATGTG 2137160 25 100.0 36 ......................... AGCTTCAAACATTTTTATAACTTCATCAACTTGAAG 2137099 25 100.0 38 ......................... CACACCAAGGAACTTCAGCCAAAGATATGCCAAGTGGA 2137036 25 100.0 44 ......................... TGATAAATATGAAGTATTTACTTCCGCAATACTTGATAGAATTC 2136967 25 100.0 37 ......................... GGTTTTAAACATCTCAAGAAGTCTGAGCGGTGGTAAA 2136905 25 100.0 36 ......................... ATCTTCTTTAGAGGTGAAACATTAACAAGTACTTCA 2136844 25 100.0 38 ......................... TCTTCGTCGCTATAAGTTTTTACCCATATTCTAATGCC 2136781 25 100.0 40 ......................... CTAATTTTTTCAGTTAGTTCGTCCAACAATTCAGTGACTT 2136716 25 100.0 38 ......................... ATTTTCTTCTGTGCGAGCTTGTTTACGTCGTTCAGCGT 2136653 25 100.0 39 ......................... AAGATGAAGAAACGCTTAAGATCTTCAACTTGCTGAAGG 2136589 25 100.0 41 ......................... GAGACCAATTAGCAGCAGCAGCCGAAAGCAGCGGTTATGCC 2136523 25 100.0 40 ......................... AGTTAAACGAAGCGAGCAAAAGCGGAAAGAGAGGAAGGGA 2136458 25 100.0 40 ......................... TTGGGATGCGCTGCTAAATGTCCAAACGTCCCCGTAACCG 2136393 25 100.0 35 ......................... TTTACCTCGTCAATTGTGTTACCTTTGCAGAATTT 2136333 25 100.0 40 ......................... CTACTTATTCAGGCCACTACTACTACACTACTCACACTAC 2136268 25 100.0 38 ......................... AGTTGCTGTACCCCCTGTAGTTCGCCTCTAAAGATGTG 2136205 25 100.0 37 ......................... GTAACCTTCATTGTCTCACCCTCCTCCCGTTTCCATG 2136143 25 100.0 36 ......................... AGATAAAAACATGACTGTTACTGTATCTGATCACGG 2136082 25 100.0 38 ......................... CCGTTCTCTGTTCTCTATTCTCTATTCTCTGTATATTC 2136019 25 100.0 42 ......................... ATATATCTAATATTGCATCATTCTTATCGCTCATAATCATAT 2135952 25 100.0 40 ......................... AGTATCACCCTTATCGTAAGTACATTATTGCTTGCGGTTT 2135887 25 100.0 37 ......................... TTACATTCAAATGTTCCATCACTGGTGAAGTTTTGTT 2135825 25 100.0 39 ......................... CTTACCGTAATATCAGTGTTAATGATCATGGTCTCACTC 2135761 25 100.0 40 ......................... TTTATTTTCGTTATTACCAAATCACTAATATTTAATATTG 2135696 25 100.0 38 ......................... TGTAATACTTGAAATCTCCTGCAAACTTTTTCCCTCTG 2135633 25 100.0 40 ......................... TCACCATACACCTCTTCTAACACTTCCTCGAATGGATTTG 2135568 25 100.0 37 ......................... ATCCATGCTGAGTTCAACTACGATGAACTGATGCATG 2135506 25 100.0 37 ......................... TTCTCATCGTAAGGCTTGAAATATATTTTAACACTAG 2135444 25 100.0 39 ......................... TATCTTCCCTTATAACGTATGTGGCGTTGGGGATTTTAC 2135380 25 100.0 39 ......................... TTAGAACTTGCTGATATGGGCATGCTTTCTATTACCCTT 2135316 25 100.0 41 ......................... ATATTATCGAAATCAACTACTCCACCAATATTAAACATTTT 2135250 25 100.0 39 ......................... CCATTATTCGGTACAGCGTTTAACTGTAACACTATACTA 2135186 25 100.0 39 ......................... CCATTATTCGGTACAGCGTTTAACTGTAACACTATACTA 2135122 25 100.0 35 ......................... CGCCTACAACAACAACAACTACCACCACTACCACG 2135062 25 100.0 40 ......................... TGTACGGGTTGGAAGAGACTCTGAATGAGTTTCTATTACT 2134997 25 100.0 38 ......................... ATTCTGTCAAAGTATATTACCAGCTTTATTGAAGAATC 2134934 25 100.0 37 ......................... ATATCTTTTTGGTTATATATTCCAAGTTTCACTTGGT 2134872 25 100.0 39 ......................... TCAACTTATGCGCAATATGACAATGGAGAAAACGTATTT 2134808 25 100.0 41 ......................... TTGACAAATATGATATCATAATAGACGCAAGAGGTGTAGAC 2134742 25 100.0 38 ......................... TTTTGTGTCATCAAAAGTTCATTTAACTCTATCTTCAA 2134679 25 96.0 0 ........................T | ========== ====== ====== ====== ========================= ============================================ ================== 71 25 98.6 38 GATTAATCCTAAAAGGAATTGAAAG # Left flank : CCTTTTATATATAATTTATCCTCATAATTATCTATATACCGTACGTTAATAAAAAGTAATTCTGACGTTAAAAAGATTTTACTTTATCAGCCTTAGTGAAATTAGGAAATATTACGTATTTAAAAGTAAGTTTAAAAAGATAATTATACGTTGCAATGAAAGAAAGATGAAAGGAGAGCGATAAGAGATAAAAAATATTTTTCGATATGATACGAAATCAGTGAAACATTATTATCAAATAGAGAACTTCAAACTTCGTTTTTATGAAGTTGTTTAAAAGTGTGAAAGTTCGAGTCTCAATGCGACCGAAACGAATCTTTCTATAATAATTGAACGTTTATAAATGATACCCAATGTTTCAATTTAACATAAAATCCTTGCGACCAGAAATTGTTAAATTAATTACAACTAAAATTGGTCGCATGAAGAGTAAAGGGTAGTCATGAAGATTTATAAGTAAGAAAGGAGAAAAGAAAAATAGGAAGTATAAAAACACAACA # Right flank : TACGCAATAGAGTCTAAGTAAAATAATCCTCATTAGAGTGAGAAAATAGCGTTTCATTAACCATTAAGTGATTTTACTTCTACCTCTCCAAAGCCAATGTTCCTACTCTTTCCCACGCCGAAGTAATTTACGTAATCCAATAGCCTCCTAATGTTCTCCCTTATCTTACTGCCTTTTCTAGCACTCAACTCAAACACAACCCATCCCACAAACCCCTTATTGGGTATGTTTCCGTAATAAGCAGTCATAGGTCTTATCCTATAGTTCACCTCTCTAAAGTAGTATAACGTCTTACTACCAGTAACTCCAACGATCTTCTTATCCATATATCTATTCCAGTGGGAGGCTATAGAGTAGAAGAGGAGTGGAACGTAAGGGAATAACACGTATCTGTTCTCTTTTCTTTTCATCCTAGGCCTAGGGGGTTGTAAAAGCGTAGGCGTCTTGAAGTGAACTCTGTAAAATCTGGCGTCCTCTGCCATGACGTTTTCCTTTACTGA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATCCTAAAAGGAATTGAAAG # Alternate repeat : GATTAATCCCAAAAGGAATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.00%AT] # Reference repeat match prediction: R [matched GATTAATCCCAAAAGGAATTGAAAG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 2150493-2158473 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011056.2 Saccharolobus solfataricus strain SARC-C chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================ ================== 2150493 24 100.0 38 ........................ TTTGTAAAACGTATAAGTCCCGTTAATGAGAAGACGGC 2150555 24 100.0 40 ........................ CAACGCCAACTCCGCCAATTTCCGCATTGATGTTCGCTGG 2150619 24 100.0 42 ........................ TCTTCAAACTTCCCACGGCACAACGGAGGCATGCAAATTATT 2150685 24 100.0 40 ........................ GTAGTAAGCTTTCCTTCTTTATCCTCTAGACCGCTGTAGT 2150749 24 100.0 38 ........................ AGCAATGTACGAACCACCACCTGCTCCAGTACTGTTCA 2150811 24 100.0 39 ........................ GAACTGTCGTGGTGTTCATGAAATATGGGTATGCATATT 2150874 24 100.0 39 ........................ GCAAAGAGTCCATTCAATAACACATATTTTGCACATAAG 2150937 24 100.0 39 ........................ AACATCCTGATCTATACTACCCCTAATCTTTCTGTAGCT 2151000 24 100.0 39 ........................ ATCTGGATGAGCTGTTGATCGGAGACATTAGTTAGGTCT 2151063 24 100.0 40 ........................ CAGTCTGACTCTGAGTTGGCGAATTATTATGAGAAGCTAA 2151127 24 100.0 39 ........................ CTATCCCCAAATCATTCTGCCTAATGCGTCAGGAGGGAG 2151190 24 100.0 39 ........................ ACCACGAGCACGACCTCAAATATAACACCGCCAAAAATC 2151253 24 100.0 40 ........................ TATCTTCCAGATGTCTCAGAAACGCCTTAAAATTATTGAT 2151317 24 100.0 38 ........................ TACATTAGACCCTAGTTGGTTTATCGCTGGTAACGTCG 2151379 24 100.0 40 ........................ ACACTTAGCGACATAAAAACCGCACTGACTTACAATTACC 2151443 24 100.0 40 ........................ CGACATACATATATATGCATTTCCGTGGGAGTGTTACAAA 2151507 24 100.0 37 ........................ ACATATGGTTGGTCTCCAACATTTGGTGAGTATATCT 2151568 24 100.0 38 ........................ GCTTCTACCACGATCGTATAGTATTTCTTCCCTATCTT 2151630 24 100.0 39 ........................ ACTTAAGACATTAAACGTTGCCCTAGGTGAACTAGGCAA 2151693 24 100.0 38 ........................ AAACAAACGAGGTTAATTATTCTTAACTGTATCGTGAA 2151755 24 100.0 38 ........................ CCTGGGACAAGTTCTGTTGTAGCTGAGGAGAAACGTAT 2151817 24 100.0 41 ........................ TCTGATAGCACCAGACAAGTAAAAGCGTATATCCTAGTCAA 2151882 24 100.0 39 ........................ AACATATTCTGGTACGGGTTCGCCATCTGGTACACCATT 2151945 24 100.0 39 ........................ TTTCTGTATTTTCTCGCCCTTCTAGCTAAATTTTCTAAA 2152008 24 100.0 37 ........................ AGACGCTGATGATAAGCTGTCTAAGAAGGTTTCAAGG 2152069 24 100.0 38 ........................ CATCCATTTCCGGTACACGATCCCACGTTTGTGTAGTC 2152131 24 100.0 40 ........................ ACATCGCAAGCGATCTATTGTTCAGTCTATTCCTGGCGGC 2152195 24 100.0 38 ........................ AACTCCTTTGCAATCCTATATCTAGTGTAGCCGTCTAA 2152257 24 100.0 37 ........................ CTGCTCCATCAAACGGCCCCGTGAGGGATACTATGAA 2152318 24 100.0 40 ........................ AATTTGAACATAATTCGGCCTCGTCAGTTTTCCACAGATA 2152382 24 100.0 39 ........................ TCCCTAACTTAGGTTGGGGTAAAGAAATAGAACATAGAT 2152445 24 100.0 38 ........................ TTTACTGACAACGCCATCATACTTACTAGCCCAACTAA 2152507 24 100.0 40 ........................ GTCCATTCTCCATTTATCTCAACCTTATCACAAATTTGGA 2152571 24 100.0 41 ........................ TCAGTTCTAGAAAGAATTATTAGCATTAGATCTTCTAGACT 2152636 24 100.0 37 ........................ CTCTCTATCCCAGATGGAATTCCAAAGGATCAAGCAG 2152697 24 100.0 39 ........................ ATCTGAATTTCCTCAGCTTCCATTGCATAATTTATTCTA 2152760 24 100.0 40 ........................ TATTTACCTTAATATTATGTATAATAGATAAGAGCTCCCT 2152824 24 100.0 38 ........................ ACTATGGACCTACTACAGGGCCTATCTGACTTTCTGTC 2152886 24 100.0 38 ........................ TTATTGTCAGAAAAAGAAATTATACTCCGATTAATAGC 2152948 24 100.0 40 ........................ GTCAAAATTGCCCAACCGAACGTTAGCAAAAATGCAGCAC 2153012 24 100.0 41 ........................ TCCCTTTCAGATTTGCAATATGTTAGAGCGAGCTTCGCAAA 2153077 24 100.0 39 ........................ GCTGAATTGTAAAATTACGTTTATTACTTTCAGTCAACC 2153140 24 100.0 39 ........................ GTTTTATTTATAAACGGCGGGTCTAGATAAAATACAGTT 2153203 24 100.0 40 ........................ TCACTCTTTCAGTCATCATTCTCTTTGCTGAGATTGCTCT 2153267 24 100.0 35 ........................ GCGAAAACAATAGCAGGCGAAATAGAAGATAAAAT 2153326 24 100.0 39 ........................ GCAATAGACAATATAAGGAAGAGCTTACCACCTAGAGGC 2153389 24 100.0 36 ........................ CCTAGAGGCGTAGCGGGCTCACAAGAAAACATTAAT 2153449 24 100.0 38 ........................ AATGCCTGAAGCAATAACGCCCAAGTTACATGCTCTTG 2153511 24 100.0 38 ........................ ATCCCGCTACGGCAATCCCTACGAATAGATCGGCATTA 2153573 24 100.0 38 ........................ GTGTATAAGCACATTAGTAGGATTAGGCACGGTACAAG 2153635 24 100.0 41 ........................ AATCACGAAAGCGATACTAAGGGCAATACAATACAAACATG 2153700 24 100.0 39 ........................ CTTATTTTGGTGTCAATAATCTGTATGTTGCCGTATTGC 2153763 24 100.0 40 ........................ AGATTGTTTTATTAATACCAAGTAGACAATTATATATTTT 2153827 24 100.0 39 ........................ CCAAAACATGTCACATGTGCCGATATTGATATTTACAAA 2153890 24 100.0 38 ........................ AAATCTACCGATCAACGGACGAGGGGGAACGCTAAGAA 2153952 24 100.0 44 ........................ GGGAGTTCCCATTCGATTTTGGGAACCCTCAAGCACAGTCTGTG 2154020 24 100.0 41 ........................ TTGTGCGCCTAGAGTTGCTACGCCTTGTTTCCACACCTCAT 2154085 24 100.0 38 ........................ CTAACTTGTTAAAGTTCTGTTGTAGCTCGTTAAGTTGT 2154147 24 100.0 36 ........................ GTTCCAGCTAAGATGTTCTTTCCTGCAGTCTTTGTT 2154207 24 100.0 39 ........................ AACTAAGCCTTCACTAGGTGAGATAAAGAGCATAGCTAT 2154270 24 100.0 38 ........................ ATCCGTTCTCCGTCCCGATCCGTACCGTTCTCTGTACT 2154332 24 100.0 37 ........................ AGCATAACTTCATCTTCTTCTACAACTTCGACAGCTT 2154393 24 100.0 42 ........................ TTAATTTATTGTCATCAAATCTATTTAGATACGCTAGTATTA 2154459 24 100.0 39 ........................ ATATTTCTTCGAATGGGTTTTCTGTATCACCTTCTTCAT 2154522 24 100.0 40 ........................ CATTTGTTATCAACTGTCCGGGTCCAGCGCTAGATGCGGT 2154586 24 100.0 37 ........................ CAAAGTCAGAGCTGGACTATCGTAGACATCTATAATA 2154647 24 100.0 38 ........................ ACGTAGCCTAGACTTGCTATAACTCCGTTGTATTGCCC 2154709 24 100.0 39 ........................ ATACCAACAGCAACAACAAACTTATTCTTCGCTCATACA 2154772 24 100.0 40 ........................ ACGAACACACCCCTTAAAACTCTTTTTCCAACATTCACCT 2154836 24 100.0 40 ........................ CAAAGTCAGAGCTGGACTATCGTAGACATCTATAATAGAG 2154900 24 100.0 39 ........................ TCTTAGCGAACTTGCAAAATATTCCGACCAAAGCTAATA 2154963 24 100.0 40 ........................ TCAGGTGAGGAAGATGGTCTCCAAAACTACTGTTATTGGT 2155027 24 100.0 43 ........................ GAGAGCTACAAACACGCTACCTAATAAAATTTCCAGATTGTAG 2155094 24 100.0 37 ........................ ATACAGATTTCGTTATCCATATCCTACATGACTTTCC 2155155 24 100.0 39 ........................ ATACATCGATCTTGTAATTAGATATCCATTGACTGTTAT 2155218 24 100.0 40 ........................ ATGGAATAGGCTCTCAACAGCAGTATAATTGGCAAGTATT 2155282 24 100.0 40 ........................ TCTACTCTTATAATTCCGTTACTTATCTTAACAGAGAACG 2155346 24 100.0 38 ........................ CGTTTCTATTGCAAGGTCTGAGATTTTTGGCCTGAGTA 2155408 24 100.0 40 ........................ GTATTGAAACGCTTAAGGTCAGCTCTAATTCTGTACGGAT 2155472 24 100.0 44 ........................ ATGTTACTAAGTAAGTTTAATAATATATTATAAAATGCCATATA 2155540 24 100.0 38 ........................ CTAAGCAGTGACTCACAGTTTAGACATTCACAAGTATC 2155602 24 100.0 41 ........................ TTCTAAGCGTGTAAAGATCTATCTGACAACACGAAACTATG 2155667 24 100.0 40 ........................ TTGAATATTGTACAAAGGAACGTTTAACCCTATAATAGAC 2155731 24 100.0 37 ........................ CAATCCCATTCGTTTTACTCACTTCTAAGAACCTCGC 2155792 24 100.0 40 ........................ AGTCTCTGCATCATGATCCCTGCCCCAGCTAAGACGTTCT 2155856 24 100.0 40 ........................ ACGATTTTCGGTGTGAATAATGTAAATTTGCAAGTATCTG 2155920 24 100.0 39 ........................ GTCTTTATGGCCCTCTGGGTCTTTCCACCATTGAGAGGA 2155983 24 100.0 40 ........................ TTATCCTCATTCTATCGGTGAGTGGAACAAATTGGGTAGC 2156047 24 100.0 40 ........................ ATCGTTATGCTGTAAACTTCCCCGGTTCTCAATCCCGTTT 2156111 24 100.0 40 ........................ AGTTAACAATACTTTATTGTCAAAGAAGCAAGGATATGCG 2156175 24 100.0 41 ........................ TTCAAACTAGATCTAGAAGATTTCTATCGGCATCTTTACAT 2156240 24 100.0 40 ........................ ACGATATGAAAGTTGCCAGAGCCTTAAACAGAATTGGTTC 2156304 24 100.0 39 ........................ GCTTCTTGTCCCTGAACTCCTTCTTGAAATGGATTTATT 2156367 24 100.0 37 ........................ TTTCGTATAAGGACCAGAACGGCAATACCCAAACTGT 2156428 24 100.0 43 ........................ ATCTACTACATCATCCTCTACCACGGCAAGCCAACAACTGCGT 2156495 24 100.0 38 ........................ ATCTAGCGTTGTCTCTGCCGTTATATATTTGAAAGTGT 2156557 24 100.0 41 ........................ ATCGCTGATCCAGAACCACGTGGCGAATACAGGAAGAACTA 2156622 24 100.0 39 ........................ ATCAAAAGTCCGCTATGGTCTAACGGTGTAAATAATTCT 2156685 24 100.0 37 ........................ AATTGGATCCCTACGGTTGACGGATCACCGAAAGTGT 2156746 24 100.0 39 ........................ ATCATATTTTGAATTCTCTTATACAGAAATCTTTGATAT 2156809 24 100.0 41 ........................ ATAGCTATATATGGAAATGTTCCAGACGCGGAATATGTTGC 2156874 24 100.0 39 ........................ AAGCCTACACAGGATAGGATACTCAAATTATATGAAAAT 2156937 24 100.0 42 ........................ TTTGCGCATTTACTTTTGTATGAGCTAGGCTATTTACATCAT 2157003 24 100.0 37 ........................ CTGAAATATCCTTCAAATTGATTTGCCAATAAATTAA 2157064 24 100.0 37 ........................ TGTTCTGTCGTTACTGTCGTAAAGCACGTCCTATTAT 2157125 24 100.0 38 ........................ ACAGTGCAGAAGTCTAATCCAAATTATTCTACTTTAGC 2157187 24 100.0 39 ........................ TCCTTGGAGATGTTGATGTTTTATACGGTATTATGTGAA 2157250 24 100.0 38 ........................ GCACAATTCGCCAACGATTTCGGTTCGCTTTATACCTT 2157312 24 100.0 41 ........................ CAAATTTCGGCGAAAATTGTACCGAATTTCGGCATTGCTGG 2157377 24 100.0 40 ........................ AAGATCATGGTATTGATATTCAAAAACATTATTCAGAGTG 2157441 24 100.0 42 ........................ ATTAGAAAAGTTTAAGATTACGCATGCAAATATGTTTTTGAT 2157507 24 100.0 39 ........................ TTCTGTTTCGAAGAAAACCCGCCTCAGATTCATTATGGG 2157570 24 100.0 39 ........................ AAATCAAACGGAAACTCCCCGGATATTATCATGTCTAAA 2157633 24 100.0 37 ........................ CCTCATCGTAAACATGCAATCTTGCATATTCAGTGTA 2157694 24 100.0 39 ........................ GCGATATATGTTATAAGAGGAGAAGGGACTTTACCCCCT 2157757 24 100.0 41 ........................ ATATACATCGCCGGTTTTATAGCAACTGCACAGCAACAAAT 2157822 24 100.0 38 ........................ GAAGTTGCAAAAATTGCCAATGTTTTTTTCAAACGCGT 2157884 24 95.8 39 T....................... ATTTATGATGAAAATAGGAAATTTTTCAGAAGAATTATA 2157947 24 100.0 37 ........................ AAAAGTTTAAATACCCGAAGCCACAAAGGTAAAAATA 2158008 24 100.0 40 ........................ CGTTCTAGAGCTAAACGATGCATACGCGGTGGTACAACTA 2158072 24 100.0 41 ........................ ATTCGGGGAAAACTTATGCATTATAAGAAGAAGAGATATTT 2158137 24 100.0 40 ........................ TCAAATAAGGAACAACTCTGGGTAAGCCCACAATACGCAA 2158201 24 100.0 38 ........................ CTTAGCGTCTCAACCTGAACCAAACTTCCTAGATCAAC 2158263 24 100.0 38 ........................ TAAACTAGATCCTTATATTTCACGTAAATGTAAAGGGG 2158325 24 100.0 38 ........................ TAAGGAGTAAGCTAGCACTAGCAATAGCGGTTGCAATA 2158387 24 100.0 39 ........................ GTTCATCAGTTCTACCTTTTGGTCCAAAGGCTGATCCAA 2158450 24 95.8 0 ..G..................... | ========== ====== ====== ====== ======================== ============================================ ================== 127 24 99.9 39 GATAATCTCTTATAGAATTGAAAG # Left flank : GCTTTATCGGAGGCATATAATAGTTCCACCCCCGAAGCTCCTCCTCAATAGGGTCTGAGGCCCTATATGAGTGGAGTCTTCGTAGCTGTCTAACTATCTGCGACCTCACAATATAATAGCAGTTGAAAAATCTAAAAACCGTTTTAAGGAGGGGGGTAAAAGAATTCCCGAATTTACTAGGGATTAACCTAGAATTAAGAAGATCATCTCTATATAAAGATTAATAATTAAACTAGGGAAAAAACTTACTTCATCGTTAAGAGAATAGTCTAGTAATTTTGTATTTTTTGTCCCGTTTTTGTAAGTGGGGGTCGTTTGATGTTAGTTTCTTAGGAGGTAGGGCGTTATCCTCAAATCATTACCTCCATGAAGAATACCTTATCCTCCCGGGCTTAGTAGGGATTGAAAAAACTATAAAAAAATTGAAAACACAAACCAGAGAAAAGCTTATAAATAACTAAGGAGAAAATAAGAAATAGTAAGAGATTAATAAACCCTCA # Right flank : GATCTTGATGATATTCAATGAAGTCCATTAGTACTTCCCCCCAAGGAGGTTGGAGAGAGGGAGAAAAAGAGTCGTTTGAGAGGTTGATAAATAGGATTATGAGGTTGGGAAGGGTTAGAGGGATGAGAGTGATTTTTGCAACGTATAAACCCCAAGATTTAAATGATTTAATGTTAACGTTAACTAACTTAAAGATTGCATTGAGGGTTAAAGAAGACGCTTTAGATAGGATTAACATGAAGGAATAAGCTAAGTTGTTGCAAGCTTCACCACCAGGGTATGGAGCGTTGAGGACTTTCTCGTTAAAGGTGAGAGATCTGATATTCAGAAATGAGAAGTATCAAGATTCATGAAGATTAGATAGATCTTAGTAGTGTTTAGAAGGTAGTATTATTTCTAGTTAAAGTGCCAAGCACTGCCTTAGGTGTAAAATCCCTTCCATCATAGGTCCACACGCTATTTAAACTGTAAGCGTATTCTAAAAACCTCCTTAACAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAATCTCTTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GATAATCTCTTATAGAATTGAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], // Array 4 2557814-2558226 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011056.2 Saccharolobus solfataricus strain SARC-C chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================ ================== 2557814 24 100.0 39 ........................ ATACTGCAAGCGAATTGGCGGAAAATTGGCAGCGACGTG 2557877 24 100.0 42 ........................ TTATCTAATTTTAATAATCAAGGAAATTCATTAACTCAAATA 2557943 24 100.0 39 ........................ CCCATTCATCTCTTTCTTTGCAGCTTTGTTCTAACATTA 2558006 24 100.0 41 ........................ TGGTAAATAGCTCTGTTAGGCCCAGTTATTCCATATTCTGA 2558071 24 100.0 44 ........................ ATTTTCTAATATATCTAATTCACTCTGCGTATCATTATGGATAA 2558139 24 100.0 40 ........................ CCCGCCCAGCCAGACTGTTTTCAGCCCAAACCGGCTAATT 2558203 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ============================================ ================== 7 24 100.0 41 GATAATCTACTATAGAATTGAAAG # Left flank : TCCATCATATGTATACATATTTAATAAAAAATTAAAGAAAAATTATAATATTCCACACTTTTTATAATGAATTCCACGTTAGACTGAAAATTGCTATAATTTATTAAGATTAAATTAATAAAATTATTATTTATATTGAAAATTCATATAAGATATTTTATATTTACTAAAAGATTTTTATCATTTGTATTTTCTTATGCTAAAACTATCCCTTTAAAATCCAGTAAAAATACGATTATTAAGAATAGACGAAAATCTTGTAAATGATTACATTTCTCTTAAAGAAAATATAGGGAAAGAGTTCCCCCGTATACAATCGTTGTTTTCCTTATTCGCTAATTCGTTTTGGGCTAGGTTGTTATCCTAAATTCATTATCTTTATGAAGAATTCGTTAAAATCCCGGGAAAACCCGGGAATAGTAAAAAAGAGAACAAAAATAATAATAATACTAATGAAAGAAGGGAGAAGAAAAGATAAAATAGAGGGTTTAAAATCCTAA # Right flank : GAAATTTATCAAGTCGAAGATTGCACTAGAGTCAAAAGGTATCATTTCTTTCTTTCCTTCATTTCTTTAACTCTCCGACTACTTCATCAGTATTGATTTTTACTATCTCTTTAGATGCTAAATCCAATAATCTTCTTGCTTGCTCTTCTTCCTTCTTTCTAACTTCTTCTTCCAAATCCTTTCTTAAAACCTCACTTACATTAATCTTATATTCTTTTGCTTTTTCTAACATTTCTCTCCTAACCTTTGTCGAGGCAGCAACCCGTTCGCCTATAATGACCTTCTTGAATTATAAGGTAATAAATATTCTGTAGTAGAATGTTTTCTACCTTATGCTTTCTAGGCTTAAAATTTAAATTCTTTAGGATGATAGATATTAATTGTGGAATGATTTCGAGGCTTAGACTAACCATAAAAGAAACCTCATAATCTTTGTACATAACGTTTGTTAAACTGTATTTAGCCTTTACATTTCTAGGTTTTTCTGCATGAGTATCTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GATAATCTCTTATAGAATTGAAAG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], //