Array 1 1409243-1407011 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035307.1 Lactobacillus helveticus strain IDCC3801 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1409242 32 100.0 34 ................................ AATGACTGATGAACAAAAGACAGCATTGAAGAAT 1409176 32 100.0 36 ................................ TGTTCAGCTCTATCTTGATGTCAAAGATCCTAACGG 1409108 32 100.0 36 ................................ ATTCTGTAAGGACTGAAACACAAACTCTAAAATATA 1409040 32 100.0 34 ................................ ATCGTTATGCAGGTATTACTACTGCTACTAATAC 1408974 32 100.0 35 ................................ TCAGGAGATACTGCCGTTGGCTTTGAAGATAAATA 1408907 32 100.0 35 ................................ AATTCATTACTGGCATTACTCCAGTCACTGCGCCA 1408840 32 100.0 35 ................................ GAAAGGAAATATATATGTCAGTCAAAGTTAATGGT 1408773 32 100.0 35 ................................ GATTTTGTTAGAAAATTAACCGATGATTTTTTACA 1408706 32 100.0 34 ................................ TACCCACCTAGCTTAGCACCTACATGGAATGACA 1408640 32 100.0 36 ................................ CATTGTAGTAAAAGTTGCAGGGTCTTGAGTAAGAAC 1408572 32 100.0 34 ................................ AATTAAGTCTAATCATAGGGGCAATAATTGCTTA 1408506 32 100.0 35 ................................ TTTTTCGTCTTCTGCTCCTAGTGACTTAGTGAGCC 1408439 32 100.0 34 ................................ AAGTGAATCGACAGGTATTGCAGATGATGATTTA 1408373 32 100.0 35 ................................ AAGATGTGGAAGAGTGCAAGCACACACAGTCCCAA 1408306 32 100.0 34 ................................ TTAGAATACTTATGATCCTTAGATAGATGAACCG 1408240 32 100.0 35 ................................ CTCTGATCTGCTCAGCACGTTGCTCTTGCTTTGAA 1408173 32 100.0 35 ................................ GATTATTCGGAACAACAGATGATCCTAAATGCTCA 1408106 32 100.0 35 ................................ CTAAAGCATACTTAGTAGCATATGAACTGGCTGAC 1408039 32 100.0 34 ................................ TACAAACACTTGCCAACTTATAATCCACAAATGC 1407973 32 100.0 34 ................................ AAAGGTGTGTGGATACCTGCTGAATATTGGTTAG 1407907 32 100.0 35 ................................ AGCATCAACGGCTCTAATTATGTCATTGCCGGTTT 1407840 32 100.0 34 ................................ ACCTGATCAAACGTTAGGCAATAGATTAACCGAA 1407774 32 100.0 34 ................................ TTTACGAATGTCTTGCCAATTAGTATATTTACTT 1407708 32 100.0 34 ................................ AGAATCAAGACCACCTGTTAGCGTTTTACCACCG 1407642 32 100.0 35 ................................ AAAGAACATAGTTTGCAGAACTGTTTCCAAGTAAA 1407575 32 100.0 36 ................................ GGCTTTAGATGCGTCAAATGCCGCCTGTGGGCTATC 1407507 32 100.0 34 ................................ AGAAGATGGATACAATTTTTAGAAATTCCAGTCT 1407441 32 100.0 35 ................................ ACACCATATGTGGTCAACGCTTTAATTGGATTACG 1407374 32 100.0 34 ................................ ACTAACTGGAACATCCAAGTACTGTGCGGAAACC 1407308 32 100.0 35 ................................ ATCGGCTAATTGCTTTTCAAGTGAATCAGCCTTTG 1407241 32 100.0 34 ................................ ACTGAGACGCTAGACGCTATTAGATCACAGTCAC 1407175 32 100.0 35 ................................ ATCAAGCTTGCCAACGGGTCGATTTTATTCTGTGA 1407108 32 100.0 34 ................................ TTTTGAATAGATGGCATGTAAGTCTGATATAGTT 1407042 32 96.9 0 ...........C.................... | ========== ====== ====== ====== ================================ ==================================== ================== 34 32 99.9 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTAGGTCCATTGCACTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //