Array 1 19643-21622 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAHS01000007.1 Lactobacillus acidophilus strain DS11_1A DS11_1A_7_length_86077_cov_55.723493, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 19643 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 19704 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 19765 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 19826 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 19887 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 19948 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 20009 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 20070 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 20131 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 20192 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 20253 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 20314 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 20375 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 20436 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 20497 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 20558 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 20620 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 20681 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 20742 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 20803 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 20864 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 20925 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 20986 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 21047 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 21108 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 21169 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 21230 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 21291 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 21352 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 21413 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 21474 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 21535 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 21596 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : CTGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //