Array 1 83372-82723 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAKOL010000071.1 Klebsiella variicola isolate Klebsiella_variicola_MC1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 83371 26 89.7 32 ---.......................... AAATACCGGCTGGGGTTTTGTACCGTGCTGCG 83313 29 100.0 32 ............................. AAAATTCCGCGCGTGACTTCGCCCGGGAGGTT 83252 29 100.0 38 ............................. TTTTTCTCCTATCTGGTGCCGCGCGAATGGNNNNNNNN 83185 29 93.1 32 NN........................... GCTGGGACGTTGAAAATAAATGCCCCGTTAAT 83124 29 100.0 32 ............................. CTCTGCGTGTGCGTCTCCGCTACGAGGTGACG 83063 29 100.0 32 ............................. ACGTCATTATTGATTCCACTCACGGCCTTGCG 83002 29 96.6 32 ............T................ TGATTTTCAAGTTCCCGCCGGTCACTGTGACA 82941 29 100.0 32 ............................. ATCCCGTCTGCCCATTTGGAGATTGAAGGTTC 82880 29 96.6 39 ...........A................. TTCGCGATATCCGCCTGCGCCGCCGCCAGNNNNNNNNNN 82812 29 100.0 32 ............................. TCGAGGCGAAAATTTACGCCGGGCGTTTTCAT 82751 28 82.8 0 ...........AT..-.........G..C | T [82738] ========== ====== ====== ====== ============================= ======================================= ================== 11 29 96.3 33 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : | # Right flank : GCAACTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCGCCGCTTGCCACCAGCCCTGCGCCTGAGCCGTTTTTTGTCCTTTTTTTGGCAAGGTATTGATAAACGCCTGGGCGGCATTTCGATCTTCGGCCAGCGCAAAATAGGCCAGAGCTTTTGCTACTGGCCCGTGCGCATCAGGCGTTGTGCGAGCAGATTGCGTAGCCTGACGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATTTTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCTCCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCATATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAACTCCTCGCTGATAATGTCATCACTAGACTGCTGGA # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.60,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 587-62 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAKOL010000072.1 Klebsiella variicola isolate Klebsiella_variicola_MC1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 586 29 100.0 32 ............................. GGAACACATGGAAAAATTCACATGGTGCGTTA 525 29 100.0 32 ............................. TTTGCTGCCGTGACGCTTTTAACCGGTATTAA 464 29 100.0 32 ............................. CATAAACGGCACTGCAGTTTCGTCGCTCTCAA 403 29 100.0 32 ............................. GCGTCATTACGCGAGCTGATCATCAAAATTTC 342 29 100.0 40 ............................. GCTACGGTCAGGATGCCGCAGAGGAAATTTCNNNNNNNNN 273 29 96.6 32 N............................ GCATATCAGGCCGGTGGAGCTGAGCTGGTAGA 212 29 100.0 32 ............................. GCGACTGTGCTTGTCTCAGCCCCGGCGAATGG 151 29 100.0 32 ............................. ACGAGGATGGGGTAATTACCTGTCGACACTGT 90 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 9 29 99.6 33 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GAACCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTAACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGCGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACGAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTGGATGGCTTACGACTGGTGTCATTTCTTCCCATTGAAAATCAATGAATTGAGTGTTCTTTAATAATGTGAAATTGTTGGGATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGATATTATAAGACAGTAATATATCTTTNNNNNNNNNNGTTCCCCGCGCCAGCGGGGATAAACCGCCGCGCTGTACTCATGATCGTTCATTGCTTCG # Right flank : GCCGAGGCGAGCGCCGTTACCGCCCTGACCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [11.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //