Array 1 710273-711094 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050133.1 Streptococcus cristatus ATCC 51100 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================================= ================== 710273 25 92.0 49 ....A.....A.............. TTCCTGTTCTACCGTCAATCCAGCCGCTTTCGCTTTGGTTAGCCCCCCC 710347 25 96.0 48 ....A.................... AATCATCTTTGTAATGCTAAAGTGAAATTCCTTATCGGTTAGAACCCA 710420 25 100.0 47 ......................... CCAGCCTCGTCAGTTTGACCGATGGCCATGTAATTGGTTAGAACCCC 710492 25 96.0 47 ..........A.............. TCATTAAGCCTGTTAATCTTGATGATTGCTGCCATCGTTAGAACCCC 710564 25 96.0 46 ..........A.............. GAAACGTATAGTCTCGCACAGATACCATTTCAAACGTTAGACCCCC 710635 25 96.0 46 ................T........ GGAGCACGGCGGACATTGATAGCATCCACAGTCAGGTTAGACCCCC 710706 25 96.0 48 ....A.................... AATCATCTTTGTAATGCTAAAGTGAAATTCCTTATCGGTTAGAACCCA 710779 25 100.0 49 ......................... AAATTGACGACGACCATTGATGATGACAGGGCGCTTTGTTAGAACCCCC 710853 25 100.0 46 ......................... TCAACTGCTCTAGAGTGAGTATCATTGTAGTAAGAGTTAGAACCCT 710924 25 88.0 48 .C........A.....A........ GGATTTGCTGATTTTGCTTGTCGATAGTCTGCATGCTGTTAGATCCCC T [710927] 710998 25 92.0 47 .A..C.................... TCATTTTGGTAATCGGTCATTGGTTTACCGATTTTGTTAGCCCCCTC 711070 25 76.0 0 ....A.....A........A..GTA | ========== ====== ====== ====== ========================= ================================================= ================== 12 25 94.0 47 CTAATCCTCGCGAGGGGACGGAAAC # Left flank : GCTATCAAAGCTTTTAGAAGGCTATGGTGTGAGGGTTCAGCGTTCCTGCTTTGAGCTGGCTCTTGATAAGCTGGACTTTGACTGCCTTGTGAGGGAGCTGAGGGCCTTTTATCAGGCAGAAGAAGGGGACAATATCATTATCTATCTGGGGCACAAGGAAGAGGAGGCTGGGACAAAAGTCCTAGCCTCTCAATTGTCTTTGGATTGTCGAGCAAGACGCAGTGGTTGAGTGGGCTCTACTACGCTGATTTCATCAGCTTTTACAGCCCTACTCAACTGTGCGGAGGTGGGACGACGAAATCGAATTCTAACGAATTACCGATTTCTGTCCCACTCTCTATGATGGCGCGGAGTTGATAGACGATATTTTGTTCTTTTAAGCTTTGATTTCTGGGCTAGGCATGGTATAATGAGGTTAGGGTTTAACTAGTTTTTAGGGGACACAAGATGTAGTGGTGGGGCTTCTGCGCATCTGTACAAGATATGGCGTTAGACCCCCC # Right flank : AGATGGGGGCTTTTTTACTTTCCCTCAGCTTCTTGCTTTGCCAAGAAAGAAGGATCTTGACTGCTTAAGCTTTTTTAAACGCTTCAAAAAAATTGACAACGCTTTCAAAACTTGATATAATAAGCTGAGTAAATAATAATCGTTCTAAAGGGCGCCATGAAATCGGTGAAAGATTCTTTTGCCTTTTTCGGGCGCTTTTGCAGTATAGAGAGGAGACCGTGTGAAGAAAGTAGAGTTACATTTATCAAAAACAAGACTAAAAGACGAAGAATTGATCAGTAAACTTCAGGGCTTTTTGATGGCGCAGATTTCGCCAGACTTTGCGACCTTTCTACATGAGCAGGAGACCAATCCCTACTCGCTGAATCTGAGCTCCAGGCACGATGAGTCGGTGTGGGTTGTCAATTTGCTTTCAGAAGAGGCGGAACAGCAAATGCTAGCTCCCTTATTAAACTTGGAAACCATCAAGCTAGAGAGCTATGCTGAGGAAATCCTTGTCA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTAATCCTCGCGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 2 816872-817696 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050133.1 Streptococcus cristatus ATCC 51100 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================================== ================== 816872 29 100.0 43 ............................. TAGTAAAACACCACCTTTTTAATAATACTTGTCTAATAAGACA 816944 29 100.0 47 ............................. AAATTACTATAGCCATTATAATCACCTTCTTTCTATGTTTTGGCTAT 817020 29 100.0 39 ............................. GAAAAGTACTGGCATATTAGCCACCTTCTTTCTTAATTT 817088 29 100.0 42 ............................. AGATTCCAAGGCGCAATATGGTAGATAGGTAAACCTTCTACC 817159 29 100.0 41 ............................. GTAAAATTGGTATAAAAGTCGCAGTAAAAGACCCTCATACC 817229 29 100.0 44 ............................. TTAAATTCGTGCGTTCTCTCCTCATGATAGGTATGCAAGTTACT 817302 29 100.0 46 ............................. AATATTGAATATATCGGTTTATTAGTTTGTACAATTAATACTCTAA 817377 29 96.6 47 .....G....................... ATTTTTTCAATTTTATACCGATAATCATCTTCTAGGTAAGCTACAAG 817453 29 100.0 39 ............................. GAAATTCCAGTTGGTTTTTCACCATTTAAAATTTCGAAA 817521 29 100.0 45 ............................. TCATATATTGACCTCATTTCTAAAAGAACTATTTATAAAAAATAT 817595 29 96.6 44 .........................G... TTGAGTACGTTCATCAAAAATCCGCCAGAATTTTTCAAAATTTC 817668 29 86.2 0 .........................TTTG | ========== ====== ====== ====== ============================= =============================================== ================== 12 29 98.3 43 GTTATACCTTACCTATAAGGAATTGAGAC # Left flank : CATGCTTCAAATAATCGTCCTTATAGTTTGCATCTGGATTTTGCAGATTATATGAAGCCGGTTATCGTGGATCGAGTGATTTTGAGTTTGATCAATAAACATCAAATCAATGCCACAGATCATTTTGAAGAAAGGGAAGATGGCTCGGTTTATCTGAATCGTGAAGGGAAGTATATCGTCTTGAGAAGTTTTGAGGAAAAGCTACAGACGAGGCTAGTCATGGGAGGCTCGACCTATACCTATGCCCAGCTCATCCAGCACGACATCCGGCAGTTTAAGAGAATCTTGCAGCAGGATGGGAACTTAAAACGCTTTAAACCCTACAAATACTATTAAAAAGTCGGTCGATCTTTTCGATTTTTTGCCTCCTTTTTAAAAGCTGTCAACCAAGCGGTTTATAAGCGTTAGGACAAAAAAGATCGACCGACTTTTTTCATTGAAATCTTGAAAAAAGCCCTATTTTTTGATACAATCAATCTAGAAACAGCGAGAATGCTGTT # Right flank : GTGTGTCTTTGTCTGTCTCTAAGGCACCAAAAAAGCGAGCATATTCTTTTCGGCTGGGAAGCCTGAGAATTTGTTCGCCTTTTGTTTTGTAGGAATATTTGAAATTTCCGTCATAATTTGCTATACTAGTAGCAGTTAGAGATTGTGGCGGAGCTGTTGGCCGCTGCATGGATAATCAAGAAAAGTACTCTTCAGTGCTTTTTTATTGTTATAAAAATGGAGGGATTATGCTTTACATTTGGTCTTATTTGAAACGCTACCCCAAGTGGTTGGTACTGGATTTTGTGTCGGCCATCTTTTTTGTAGTGGTCAATCTAGGGCTGCCAACGGTTTTGGCGCGCATGATTGACGAGGGGATTAATCAAGGCAATCAGGAACGCCTGTATTTCTGGGGCTTTATCATGCTGCTGGTTATTATCCTTGGAATCTTGGGGCGGATTGTCCTTTCCTATGCCGCTGGAAAATTAACGACCAGCATGGTGAGGGATATGAGGAATGAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATACCTTACCTATAAGGAATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //