Array 1 918066-912722 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT571436.1 Neisseria weaveri strain NCTC13585 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ==================================== ================== 918065 34 100.0 35 .................................. TCTCAAAATGCAAACAAAATATAACAAGTAAAAAC 917996 34 100.0 36 .................................. GACCGCGAAGAAGTGGGCGTGGAAGTGGCTACTACC 917926 34 100.0 33 .................................. TAAAATTGTGATTGAAGCCGATGTGTCGGGCGT 917859 34 100.0 35 .................................. CCGCGTGCTCGGCGTGAGTTTTGAATGGTTGGCCA 917790 34 100.0 35 .................................. TGAATTTGGCGGTAAGGTCGACACAGCTAAATTAC 917721 34 100.0 33 .................................. ATTTATATCTTTCAGGCTGAAAATCCTGCCCGC 917654 34 100.0 34 .................................. CAGCTACCCTTAATATTAAAAAACTAGGAAAATT 917586 34 100.0 35 .................................. GTCCTATGCCAAGCGGCTCGAAAATCCCCGACTAC 917517 34 100.0 33 .................................. ATGGTTACTCTGACTGTGAAAGACGGAGAAAAC 917450 34 100.0 35 .................................. CATGCTGTTGCCGCGCACGGTAATCACGCTTAAAT 917381 34 100.0 34 .................................. TTTACATGGCGATGCTCAATGGGCAAAGCCTGTT 917313 34 100.0 36 .................................. AAGAGTTTTCCGAACGCGGGGAAGGATACAAAAAAC 917243 34 100.0 33 .................................. CATAAACGTTACCCAAATCGTTTGTTTCCGGCG 917176 34 100.0 35 .................................. ATAAATAACAGTTTGGGCAGTTTGAGATTTATCTA 917107 34 100.0 33 .................................. TGATTGCCCTGCTGTGGTACTGGGTTAAGGGTA 917040 34 100.0 33 .................................. TTTGCGGTTAAGTACGGCCGGGACAAACGGCGC 916973 34 100.0 34 .................................. AAGCGTTTGCCCGAGGTGTTGCAAGAGCCGGAGG 916905 34 100.0 33 .................................. GCGATGGAGCTTGTTGCCGCCGCGCGGGGTTTG 916838 34 100.0 34 .................................. AAAAATACCGGTGATCTCGGCGGCTTGCGGGGCA 916770 34 100.0 35 .................................. ATACGCCGACATGCCGCTTCGGCTTTTGGGCGGAG 916701 34 100.0 36 .................................. AATTTATTTCGGCGCGCTCGACCCGTCGTTGGGTAA 916631 34 100.0 34 .................................. GGGCTCAAACCCGAGGCCGCAGTAAAATACTTTG 916563 34 100.0 35 .................................. ATTAAATGCGACGCCAGCGTCGCATTTGACGGAGA 916494 34 100.0 35 .................................. AGCATCTTGAACCGCCTTAGCAGCCTGCTTATAGC 916425 34 100.0 36 .................................. TCGAGCATCATCAAACTTGAGGTAAGTAAAACGGCC 916355 34 100.0 34 .................................. GCCTGTGCCAACTGCTGCGCTTTAGCCTCTTTGC 916287 34 100.0 35 .................................. GTCTCCGGTTTTCGACACTTTCTCTTCATTCAGCT 916218 34 100.0 34 .................................. AGTGCTAGGTGGAATGGAATGCAATAACGCCCCC 916150 34 100.0 34 .................................. AGGAAAAGACAAAAGCAGCCGTCTTGGACTGTGG 916082 34 100.0 35 .................................. AGCGGTGGGTTGTCATAGTGGTATGCGATGGTCGC 916013 34 100.0 34 .................................. TCCGCATAACCTTTGTAATAGATGTTTTCGCAGC 915945 34 100.0 33 .................................. TACAAAGACAACCTAAGTTACAACACCCTCCGC 915878 34 100.0 35 .................................. TCGCCAGCCCGTGGATGCGTTCGATATCGGAAGGC 915809 34 100.0 34 .................................. CAAGTAGTCAAGCCCTGCAACGTCAGGGTTATGA 915741 34 100.0 34 .................................. CTATGAGCATGCCTGTTATGTAGCATCGTTGTTA 915673 34 100.0 36 .................................. TATAAATCCAATACCAATTACAACACCCAGCGTAAA 915603 34 100.0 36 .................................. ACGGACAATCCATCCGAATTACTGATGGATAACCGC 915533 34 100.0 34 .................................. ATCCCTACCATGGCTGAAAAGCCCGAATCCAAGC 915465 34 100.0 36 .................................. ACGGACAATCCATCCGAATTACTGATGGATAACCGC 915395 34 97.1 34 .C................................ ATCCCTACCATGGCTGAAAAGCCCGAATCCAAGC 915327 34 100.0 34 .................................. CGCCTTATATCCAAGAATTAACAGAACTCCGTCA 915259 34 100.0 33 .................................. ATATATCCGATTGCGGAAAAAAAGCGGCAACGC 915192 34 100.0 34 .................................. TGCTTAGCTTTACTTCGGCTACCCATTCCTAATC 915124 34 100.0 34 .................................. GGCGGTCTAATGCTTGCATATTAGCGATAACGCT 915056 34 100.0 36 .................................. TGCAAAATCTCCAAAATTTTCTGCGTCCGGCTCCTC 914986 34 100.0 35 .................................. CCCGGCAGAAAATCCCCCAACCCCTTGCCGTTTGC 914917 34 100.0 34 .................................. GTGTAGTTTAAAGGATAAAAATGATGAAGATTAA 914849 34 100.0 34 .................................. CGAAGACCATATTTGGGATATGATAAGGTATAAA 914781 34 97.1 35 ...............A.................. ATAGAAATCCCGTTAAGGCGTGGTCGTGATGATGG 914712 34 100.0 35 .................................. TGTCACCATTTAGCGATTTTTTTGTCACCACCCGA 914643 34 100.0 35 .................................. TGATATCCTTAATTTGCTGCTAATTGGCGGATTTG 914574 34 100.0 34 .................................. ATCTTAAACAAGCCGTCTTCGTTGTTCAAAATCA 914506 34 100.0 33 .................................. CGCCGTATAAACGGTGCAATTATCTCTCAATAG 914439 34 100.0 34 .................................. CATATCAGCGATAACGCTCTCCCACCAATCATAA 914371 34 100.0 33 .................................. ATTGTAAAATTCAAAGCTGAAAAGGTCGCCTTC 914304 34 100.0 32 .................................. ACCCAATCTGTGGTATTGCAGTCGCAGGCCAC 914238 34 97.1 32 G................................. AGGGGTATCTAGATAATCAAAATGATTGCTGC 914172 34 94.1 33 CG................................ ATATTCCGATCGGCAAACCCGTATTTTTCCAAA 914105 34 97.1 35 .G................................ CAGCGTGTTCAGCGGCTTGGCAGGGTCTTCCTCAA 914036 34 97.1 32 .G................................ TTGGCACCGCCGCTAAAGGCGTTGGCTTGATA 913970 34 97.1 34 .G................................ CAAAAGTATCCGGTACCGTTTTTGTAAGCGATAC 913902 34 94.1 33 CG................................ TACATAGGCAAACGCGGTAACAGCAAATACACC 913835 34 94.1 34 CG................................ AGCGTTAATGAGACGCCGGTAATTGCCCGTAATG 913767 34 100.0 34 .................................. GCCTAACCGGTGAGGCATACAACAAAACGAGTAA 913699 34 97.1 33 .C................................ ACCCAAAAGATTGCTAGTTGCTACGTTTGCCTC 913632 34 97.1 32 .T................................ GATATAGACATTATCGGGGGCGCTGAAAAGCC 913566 34 94.1 35 CG................................ ATAAATAAGCTTTGCAAACTGTCAGCAGAGATGGC 913497 34 94.1 33 TG................................ TGCTCATCTAACAAATCAATTTGGGCATTCGTA 913430 34 97.1 33 .C................................ AATATTATTTGTGATGTACATTTTTATTTGCTC 913363 34 100.0 35 .................................. TATGTCTTGGAAAGGTTACAACGTCTATCAAATAT 913294 34 100.0 36 .................................. CTTTGTGTTTTGTGTTTCGATGTGTGAATATTACCC 913224 34 100.0 34 .................................. TGGTATGACCCCAATAATCAACTGTGTAGCTAAT 913156 34 94.1 33 GC................................ GACCATGCGGCGCGCGCCTAGGCTGGTTTTGCC 913089 34 97.1 34 G................................. AAATCTTTTAAACGACCTTAAAAAATGTGGTCGA 913021 34 100.0 32 .................................. CTTTTTCGTCTTTAAACGATATTTTCCACGAC 912955 34 94.1 33 CG................................ CCCGACAACCATACCCGCATACCGTGGCGCGGG 912888 34 100.0 33 .................................. ATGCCTAGCACGGAGCGTGAATACAAAATCGAC 912821 34 91.2 33 CC...............T................ TTCTACATATTTTATTCAAAACGACAAAAAGAA 912754 33 70.6 0 T..............T.AA..C.C.C.C-....A | ========== ====== ====== ====== ================================== ==================================== ================== 79 34 98.6 34 AAACAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Left flank : AATAAGGGGAAATAGCGTGTTGATGTTGATTACTTATGATATTTCGCTGGAAGACACAGAAGGACAGGCGAGGTTGCGGCGCATAGCCAAACATTGCTTGGATTACGGCGTGCGCGTGCAATATTCGGTATTCGAGTGCGACGTAACGCCTGATCAGTGGGTGAAACTCAAAGCCAAGCTGCTCGACACCTACCAGCCCGAAACCGACAGCCTGCGCTTTTACCATCTGGGCAGCAAATGGCGGCGCAAGGTGGAACACCACGGCGCGAAGGCGGCGGTGGACGTGTTTCAAGATACGCTGATCGTGTGAATCGCTAACCCGTGGTTCTCATGAAAACATGGGGAGGTTAGCGATGCGGAATTGTTCTTTAACAATCAGGAAATTAGGAAAGCGGGTGTGGCGGAATAAGGCTGTGTTATACTCGCTTTTCGCGTTTTCGGAGAGCTTTAGCGAATCAGGGCCGTGCAAGCCTTGATGGATAAAGGTTTCCGAGAAGGCT # Right flank : ATTGGCGCGTTTTTTGAGATAAATCGGATTTAAATTTGTTTCACTCTGTGAAATACTTTTGCAAATTATACCGAACTCGGGAAAGCAGAATGACAAAAGCGACGATGTAGTCGCTTTTGTTTTATCTACCAGTTGCAGATGACCAGCTCGCCGCTGGTCTTTTGCGTTTTATCACGGTGGGCAATGCAGACTTAACCTGCTTTGGCTGGCGTGTCGGTGCTGCGAACACCGGCACGCCGCCGTCCCTCCTTATCTCTATCCCTACACGTCCGCTCCCTCTCTAACGGTCAAATGCACCACATAATCCACATCAATGCTCTCAAACTTGAAATTGGACCGGATTTGTACGCTGCTGCCCGTCAAATTACAGTAATTAAGCTCCAAAAAGCTCACGTTTAAAGACTTGTGCACGATCTGATAGCTCAACTCCGGCTGGGTATAGCTGTTGGCAAACTGTACGGTTGTCCACGGATAACCGCCGTTGGACCACACATCCTGCC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAACAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched AAACAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [28-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //