Array 1 3963023-3961367 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070490.1 Lysinibacillus fusiformis strain NEB1292 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 3963022 29 100.0 38 ............................. TTGTTTGAGGAATTGTTTAAACGCAAAGAGGGGTTTGA 3962955 29 100.0 36 ............................. TGCAACTCTTTTGTAACGGCGCTTGCTACTTCAGCT 3962890 29 100.0 36 ............................. GTGACATAATACCAATGGTGGCAATTTGGAGGATGA 3962825 29 100.0 35 ............................. AATGAAACACATTCAATCCTTCAACTAATCTTCCA 3962761 29 100.0 36 ............................. TTGATAAGACTACCAGTTGGATTTGGGTCATTACTT 3962696 29 100.0 35 ............................. TGAGCAATTTTAAGGGTCTTATCTGGACTATACTT 3962632 29 100.0 38 ............................. TTTCATGGGATTCCATAAAAGATGCACAGGCTAAAGTA 3962565 29 100.0 37 ............................. GTAAAGATATAGCTTGTCTATATCTGCGCTAGCTAAT 3962499 29 100.0 35 ............................. TCCTCTTCCCTTGATAGCTTTTGTTGTTGAAATTG 3962435 29 100.0 36 ............................. AATGTCAGCAAAGCTTGCCACAACTTCAGCATCTTT 3962370 29 100.0 36 ............................. ATAGCTACTAAAATATCAAGTATTTTTTCCATGTTT 3962305 29 100.0 37 ............................. AAATTCGTCTAAGATTAGCCATAAGATGCCGGCTGCT 3962239 29 100.0 35 ............................. TTTTTCCAAATCCACTCATATCTAAACAGCTTAGA 3962175 29 96.6 37 .....................T....... CTGGTTACGGAAACTAAATTCAATTGAACCACGCGTG 3962109 29 100.0 36 ............................. TGATCTTGTGTTCTTATATTCATTTACTAGCTGCCT 3962044 29 96.6 36 .....................T....... GATAAAAATCGTGAAGTTATTGCAACAGATATTAAC 3961979 29 100.0 35 ............................. GAATATCTCGAAGAAATTGGCAAGCTGGGTGATAC 3961915 29 100.0 36 ............................. CCAGCAATCATTTTCTGTGGTTCGAATGCCCATACT 3961850 29 100.0 36 ............................. TTATTATACACAAATTACTGAAACTTGATGGTTGCA 3961785 29 100.0 36 ............................. TCTGTAATACCTCCACAAATCAGGATTTTGTCGTTT 3961720 29 100.0 37 ............................. GTAACAAAGCTTACTTGTTCAATGTGTGGACAGTAAC 3961654 29 100.0 36 ............................. CTCAAATACGCTTTTTCAATAGCAAGTGATAACTTT 3961589 29 100.0 35 ............................. AAGAAATTAGAAGATGAGATTTCCAAACGTTACCC 3961525 29 100.0 36 ............................. GAAAACATTGATGCTTTAAAGTCGATTATTGATGAT 3961460 29 93.1 36 ....................GT....... CAGAATAGGATAAGAAGATATTGTCCAACTGACGAC 3961395 29 82.8 0 A.....T....G.....CA.......... | ========== ====== ====== ====== ============================= ====================================== ================== 26 29 98.8 36 GTTTTTCATTAACTAAGTGGAATTTAAAT # Left flank : TTTACTTAGCTGATTACGATTAGTGATTCTAACTAAACTTCATTTAACTTCCTTTACCCTCTTCAACTACATCTAATCAAAAAACTCACAGTAACTAGTAGCAACCAAGAGCCTATATGCCTCCCCAAATATGAAATTCACATTGAAGGTGTTAAAGCACTAAGTATACGACGATTGCTCATGATGGGGAGGTAACACGAGTAAGGCAAATTTATAAAGCATGAAAATATTTAACGTAGATACAAAACTCCCTATGAGCATGTGCTCGTCATGAACTATTACTTGAATGGAACGGATTCTCCCCTCTTTATATAAAATTGCAGTGAATCATTTTACAACATTAAATCCCTTCAAAGCTTATCATACCTAGCTTCAAGGCACTTGGATGGCAAAGGGAAATTTCCGGACTACTGATTGACTGCAAATGAATCATATTGATCGCAACATACAACCCGATAAAGCGTTGAAAAATAAGGGTTTTTTGATTATGATTAAGGTGG # Right flank : CCTTAAAATTTATTGTATAAATAAAATTTCCTGTTAAAAAAACCAACAATAACCGAATTTCCTCGGTCATTGCTGGTTTTTTTAATTTACATTATTTCTTGCGTTTCACAAAAACAATAACAAAAATAGCTGCTAGTACAGCAAGGATGGCGATCATCCATACTGTGTTTGAGTTGGATGTTGTGTCATCAGATGCGGCTGCTTGTTGTTCTTCTCTTGGTGTGGCGTTCGAAGACTCCATTTCTTTGGTATCTTCTTTCACCACTTGTGTAGTGCTAATTTGCACATATTGTAGAGTTGCTTCATCTGTGGCGGATGCTTCGTGTTCGTGGCTGTCGCTGTGTCCTTCTGCATGGTCGCCGTGGCTTTCTTCTTGCCCACCGTCATGACCATGGTGGTGATCTGCTGCTGTTGTGAAAATAGAGCGTTCTAGCTGTTGCCCTACCCAGCTTTTGGCATCTGTTGAATCGGCAAAGATGCGAGGGTGTCCTGACAGCATG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCATTAACTAAGTGGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 3972340-3974181 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070490.1 Lysinibacillus fusiformis strain NEB1292 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 3972340 29 100.0 36 ............................. GATGCTGTATTAAAAAAGAGTATTTTTATTAATAAC 3972405 29 100.0 35 ............................. ACGAAATATATAGTCGGCTCTTTTGTAAAAATTTC 3972469 29 100.0 36 ............................. ATATACTAACTCAATAACTTCCCTCAAGGACTTATC 3972534 29 100.0 36 ............................. GCAGATGTGGAGACGTTATGAATCATCATTTGTGCT 3972599 29 100.0 35 ............................. CCTTCCACAGTTGTTTGTGTCGGAGCTGTATCAAG 3972663 29 100.0 36 ............................. CTCATAAGTACGGCAAAGGTTTTAAAGTTACTAACT 3972728 28 96.6 38 .....-....................... TCAAAAATTCCGTTATAGTCAACCCATGTTGCTGTATC 3972794 29 100.0 35 ............................. CTAGGGGCATTAAACGTAGTAGTCACAGGCATTTC 3972858 29 100.0 35 ............................. ATACTATAGTTATCTCTGAAATAAACCTAAGTATA 3972922 29 100.0 36 ............................. TGAGGTTATAAACTTGAATATCAATCGTATCTACTT 3972987 29 100.0 35 ............................. TGCACAAGCTCATTTAGCACCCAATCACCATCATC 3973051 29 100.0 35 ............................. GTTGCAGGGATAGATTTACTATACGCAAGTATCAC 3973115 29 100.0 35 ............................. GTGTACGAGGCATTTTTAACTGAAGCTGTTGCGAG 3973179 29 100.0 36 ............................. ATGAAGGTCGTTTAGTGCCAAAAACATGGTCAGACC 3973244 29 100.0 34 ............................. TGAGCACGAATCATAGTCACCTTGTCACCCTTAA 3973307 29 100.0 35 ............................. TTATTATTTGAAGTTGTTGGCTGTGGTGTACTTCC 3973371 29 100.0 37 ............................. TTTTTTTAGATATAATCTGCATCTCAGCTTTAAATTT 3973437 29 100.0 37 ............................. TCTTGACGCTGATACGGAAAAACACCAGGACGAGTAA 3973503 29 100.0 37 ............................. AATTCACCAGTCTTCTCACCCGGTTCCTCGAATCCGT 3973569 29 100.0 34 ............................. GCTAATGCAAATGTAGATCCAGCAACCACACCAA 3973632 29 100.0 37 ............................. GTACGTAATATCCTTTTCGATAGCCCTCAAGGTATCA 3973698 29 100.0 38 ............................. ACGGATCAGCGGCAAAAGAAATATTTGGTAAAGGTTAT 3973765 29 96.6 36 .........................T... TACTTACGGCGCATTGGTAGTACCTTTCTCGATATC 3973830 29 100.0 35 ............................. TGTTCTGCCGATGTGCCAGGCGTAAATGCGATACT 3973894 29 100.0 35 ............................. GTCGTCTGTAGTTTTAGTTGTAAAAGCATCATCAC 3973958 29 100.0 36 ............................. ATCTGTGAGTTCTTTAAAAAGGTTGCGTGTTTCTTG 3974023 29 100.0 37 ............................. TCATTTATTCCCCCTTGACTTAATAAAAGCCCTTCAC 3974089 29 100.0 35 ............................. TTTCATCGATTTCATGTCTTGTAACTAGCTTTTAA 3974153 29 72.4 0 .....G..A...TA.........C.T.CC | ========== ====== ====== ====== ============================= ====================================== ================== 29 29 98.8 36 GTTTTACATTAACTAAGTGGAATATAAAT # Left flank : CCATAAAGTATTGAAAAAATATTTAACGTGGACACAAAACTCCTTATTTGAAGGAGAAATTACAGAAGGACTTTTAAAACAATGCCTAGCTGAATTAGCAACAAAGGCTAATCCGAATATTGATTCGATTTATGTTTACCGAATTGCCAATCCAAAAAACATGAAAAAAACTGTGTATGGGGTCGAGAAAGATTTTGAGAGCATGTTCTTATAGATATCTATTATATTATCAAATGACTGGTCATGAAAAGAGGGAATCAATCGCATTCAAGTTATCTCATCCAATTTGAATGCAACAGATTCTCTTTTTTTGTAGTATTGCAGTGAATCATTTTACAGCATTAAATCCCTTTAAAGCTTATCATATCTAGCTTTAAAGCACTTTAATTGTAAAGGTAAATTTCTGGACTACCGATTGACTGCAAATAATCATATTTGTCGTAATATACAGCCCGTCAAAGCGTTGAAAAATAAGGGTTTTTTGAGTATGCTTAAGGTGG # Right flank : CAACCACCGAAAAAACGAACAGCACACCCTCAACCGCTGTTCATTTTTTATTGCCCAAAACCATCCTTCTTTCATTAAACCGTCAAACATTCCAATTAAACCCCTGCATATTCCAGTAATTTTACACAAAATTGAATAAGCACAAGCATGTTCGGTATATAAATAGGGTACGAACATTTTTTGGTTAGGAGTGTGTAAATGGCTGTACTTGTGGTGAAGAGGAGTATTATGCATCGTTATCAAAGTATCGGGCAGGCGATTGAAGAGGCAGCGCCAGGGGATATGATTGAAATTCGGGATGGGATTTATGAGGAAAGCTTGGATATTGCCAAGCGGCTGACGTTGTATGGGGTTGGCAATGTGACGATCAAGGGTGGCGTTTTTATTCGCTATCAAACACATGTTGCGATGCGTAATTTACGGTTTCGGCAAGGGCAGGGGCTGTATGTGAAAGGCGATTTACAGCTAGAGAATTGTGTGATTGAGGAGCAATTGATACG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACATTAACTAAGTGGAATATAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //