Array 1 4313-137 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUGF01000047.1 Moraxella caprae DSM 19149 K941DRAFT_scaffold00043.43_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4312 28 100.0 32 ............................ AAGCAAAAACCGCAATGGTAGTTATCCCTGCT 4252 28 100.0 33 ............................ ATGATAGGTAAGGGTGGATGTTCTCTTTTTATT 4191 28 100.0 32 ............................ GTGATAGTCGTATTCCACGCATTGAACTTGTC 4131 28 100.0 32 ............................ TTTGACTTTTGGTAAAAAGTCGGTTTTTGATA 4071 28 100.0 32 ............................ TATCCAATTCGCACGGCAGGGGGCAAGGGTGT 4011 28 100.0 32 ............................ AACGAATTGACTAGTGAACAGCAATCTGAACA 3951 28 100.0 33 ............................ TCATAGGTTAGGAAGGAATTGTAACAGGTATGC 3890 28 100.0 32 ............................ CGACCACGAAACCATAGAACAGGCATTAGCCA 3830 28 100.0 32 ............................ ATCAGCGTGTTTCATCATAATAAGCCAACCAC 3770 28 100.0 33 ............................ CCGCCTATCGTGGAGGTGCTATGTGTGGATAAT 3709 28 100.0 32 ............................ TAAGTTACCAGTTTTGCTTTATGACTACTATT 3649 28 100.0 33 ............................ GCCACGATTTATTGCGTATGGCAATTCCAAGCC 3588 28 100.0 33 ............................ ACTTTTCCACCGTTGCCAACCCTTTTCCACCGT 3527 28 100.0 32 ............................ ACGCATTGAACTTGTCAAAGACATAAACAAGC 3467 28 100.0 32 ............................ CAAATGTCCACTAATTGCAACTGCCACCGCAG 3407 28 100.0 33 ............................ ATTGAAGAGTTTAAGCACCAATTAGACCCCGAT 3346 28 100.0 32 ............................ TAACAGGGGCTAAGATATGCAAGGGCAAAATA 3286 28 100.0 32 ............................ GTTTTGGAAAGTCAGTAAAATTATGCAATGAC 3226 28 100.0 32 ............................ AATTTGTGGTGGGAAGTATTCGGCGTAACGCT 3166 28 100.0 32 ............................ TGTGTGATTTTTAATACGCATTTTCATAACAT 3106 28 100.0 32 ............................ TGATAGTCGTATTCCACGCATTGAACTTGTCA 3046 28 100.0 32 ............................ TCTATGGTTGGTTAAGGGTTTTAGAACCCTAG 2986 28 100.0 32 ............................ GGGTTATTATCGTCAAGAAGTACCCGGTCATT 2926 28 100.0 32 ............................ TGAAATGCGTGAACTATACAAAAACCGTGATA 2866 28 100.0 32 ............................ CACCACAAATTGGAACATTTTAATACTTAAAC 2806 28 100.0 32 ............................ TCACATTGCTGGGCGGATGACAAAACCACGAT 2746 28 100.0 32 ............................ ATCAATGTAGCTATCATCAGTAACTGCAACTG 2686 28 100.0 32 ............................ TTTGGGAAAATTTACTTTGTGTTGCATACCCT 2626 28 100.0 32 ............................ TAGATGGTTCTAGTTTAAAAGTACCTATTTCT 2566 28 100.0 32 ............................ AGAACAAAAAAATATGACAAGAGCAGAAATAA 2506 28 100.0 32 ............................ TTGGGTCTTTTGATAATCGGTAAGACCAACAG 2446 28 100.0 32 ............................ ATTTGATACGCCTGAAATGCGTGAACTATACA 2386 28 100.0 32 ............................ ATGCATAATCAACCATCCCAACACCATACACA 2326 28 100.0 32 ............................ ACCCAACCCATTGGCAACCCCTACCTAAGCCA 2266 28 100.0 31 ............................ ATCATCGCCAACAGCTCGTCTTGATAATTCT 2207 28 100.0 32 ............................ ATAGTTGCAGTTACTGATGATAGCTACATTGA 2147 28 100.0 32 ............................ ATTGGTTATGGTTATTTTCTTGAACGCCTTTT 2087 28 100.0 32 ............................ ATATGACTGCAAAAGGGCGTTTTTATCATGAT 2027 28 100.0 32 ............................ GGGTTATTTTGTCTGCACAACTCAGGCATCGA 1967 28 100.0 32 ............................ AAATAAAATGGGCGTTGTTAATCATGCTTTGG 1907 28 100.0 32 ............................ GCGATAGTCGTATTCCGCGCATTGAAATCTCT 1847 28 100.0 32 ............................ TAGTGTGCTAGGACAAACGATTGGCAAAAGTA 1787 28 100.0 32 ............................ ACATTATCAAGCCGTATTCAGAATTGACAAGG 1727 28 100.0 32 ............................ ACGCATTTTGGATTTAAAACATGACGGCTATC 1667 28 100.0 33 ............................ ATAAAATATTTATGCATTTATACATAAATATGC 1606 28 100.0 32 ............................ CTAACCATAGGAAACCAACGCTATGAATAAGT 1546 28 100.0 32 ............................ TGTTTGTGGCACGGATTCAATGCCTTTTTAAG 1486 28 100.0 32 ............................ AAGCGGAGTGGGAACGCCAAGCCCAACGCCAA 1426 28 100.0 33 ............................ TTGCTGAAATCAGACAAACAAAAACCCCTAGCG 1365 28 100.0 32 ............................ CCGAACTTTGCAAATACTTAGACTTTCGTAAT 1305 28 100.0 33 ............................ AACAATCAAAATGAAAATCGTTGTATGATTCTT 1244 28 100.0 32 ............................ TAGTAAAATCAATGACTTAACAAAAAATTCTA 1184 28 100.0 32 ............................ TTACCCTCAAAATTCTCCACGCCTTGCAACGC 1124 28 100.0 32 ............................ TGCCAGCCCTTGCTACATAAGCTCTCAACGCT 1064 28 100.0 32 ............................ TTGCTCGTGCCACATCATTTAGCATTGAGGGT 1004 28 100.0 32 ............................ TCTATTTAGCTAGATTGTTTTTGATTAAGTTT 944 28 100.0 32 ............................ TACTAATAGAGGATACTAATATGGGAACTTCA 884 28 100.0 32 ............................ TTGACAGCTTACTAAAAGCTATTGTTAAACCC 824 28 100.0 32 ............................ TTGCCAATGCCAAAGAGATGGAAATTGTGCAA 764 28 100.0 32 ............................ AACTAAAAGAGGTTGTTATGAACTTGTCTTTT 704 28 100.0 33 ............................ TGCCATTTTTATTGCATTATACTTTGGTTATTC 643 28 100.0 32 ............................ AGGAGAAACCCAATCCACAGGAGAAACAAAAT 583 28 100.0 32 ............................ TTTTGTTGCAGGTGCCCAAACATTAGAATTCC 523 28 100.0 30 ............................ AAAACCCCCCTCTCTTTGCACAAAATGACA 465 28 100.0 32 ............................ AACAACCGCCCCTAATGGGGCTAAGGAAAACA 405 28 100.0 32 ............................ TTGTAAACTTCTAGATGAGAACAACACGCATT 345 28 100.0 32 ............................ GTCCTAGCTGTTTTGCTTTTAGATGTTGGGCT 285 28 100.0 33 ............................ GCTGTCCATCAAAGACTTTGCCATGTCCTTACC 224 28 100.0 32 ............................ TCAATGGCGTTATTCTGCCAATATTTATTTTG 164 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 70 28 100.0 32 ATTCCACATCGCATAGATGACTTAGAAA # Left flank : TCAAAGCGATAGCGGACGTTGGCGAGCGAGCGACAGGCTATGTGGTGGTGGAGCGTTATCGCCATTATGACTTGGGCAAGCAGGTGGAGCGGTTTGCTGATTTTAAAAATTTGACAGTGGAGCAAGCGTTGGAGCATTGCCTTGCCCACAAGAAAAAAGCCAAAAATTACCCCTTTGTCCGCCTAAAAAGTGAGACCAACCAACGGCAGTATCATCTGCATGTCCGCCAATATACGGTCGCCAAGCCACAAACGGGGGTGTTTAACACTTATGGCATTACCAACATTAATGACGAGACCAAGGCAAGCGTTCCGCATTGGTGATTGGGGTTGGTTGTGCTAAAATAAGGGGCATGATACAGGTTTACACCCTTTATTTTTTGACTATTTAAAAACTTGATAAAAATCAAACACTTATAAACAGGCGAAAAAACATTGGGTAAACGCCCAAAATATGGCTGTAAGCCTTGATATAAGTGGGTTTTATGTTGTATAATTCTT # Right flank : ATTTTTGGCTCTGGTTCAAAAAGTATGCTACAGAGAAAACAGTTCGTGGCGAGCTTGAAACCTAACGGTTTTCCTACCCGCAGGCAGGCTCAGGGCGAACGGAAAACCTAGTTTGGCATACTTTTTAGACCACTACC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCACATCGCATAGATGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //