Array 1 72575-70101 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGGZ01000017.1 Streptomyces sp. CG 926 Ga0105840_117, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 72574 29 100.0 32 ............................. GCCCCGAAAGGGGCTCAGCGGGGCTCCTGCGG 72513 29 100.0 32 ............................. GCCACGGACCTGCGAGGCAACGCCAACGCGAC 72452 29 100.0 32 ............................. CTCGGCGCGACGGCGGTTGATCTGGCCGCGGA 72391 29 100.0 32 ............................. GGGTCGCACTCATTTGCACTGAGGGAGAACCA 72330 29 96.6 32 ............................T GCGCCTCGGGTCGCCACAAGATCAGGTGCTGG 72269 29 100.0 32 ............................. TGGTGCAGTCGGACCGCTGGAGCTACACGGAC 72208 29 100.0 32 ............................. TCGTCCCGCTCGTACCGGACGATCTCCACGTC 72147 29 100.0 33 ............................. GCAAAGCGGCCCCCCACCCGGATGGGTGGGGGG 72085 29 100.0 32 ............................. CGGGCGATCTCGTCTGCTACGGCACCCCCGCG 72024 29 100.0 32 ............................. CCCGTCGGCCGGTGGGAGCGCGAGGGTCAGCA 71963 29 100.0 32 ............................. GGCGATCGGCTCGCGTTCACCATCACGTTCGG 71902 29 100.0 32 ............................. GACGTGGCCCGCCCCGGATACGTCGACGTGAT 71841 29 100.0 32 ............................. GGGTCCACGGCCGTATCGGCCTCAGCCACGGA 71780 29 100.0 32 ............................. TCGATGGGGATGGACCGGCCGTCGTACACCCT 71719 29 100.0 32 ............................. AGGTGCGACGCCTGCGAGTAGGCCATGAGCGG 71658 29 100.0 34 ............................. AGCAGGGGGCCCTCATGGTTTCGACGCCGGGGGC 71595 29 100.0 32 ............................. ACCTGGCTGTCGCCATCCTGATCTGCGTGATC 71534 29 100.0 32 ............................. GGCCCCCGGTCGGGATGAGTCCGTGCGGGGTG 71473 29 100.0 32 ............................. GCGTACGAGTGGGACGCCTTCTGTCTCGGGAA 71412 29 100.0 32 ............................. TCAATGTCCACGTCGGAGGAGTCCCGGGAGCC 71351 29 100.0 32 ............................. TGGCCCAAAGCGCTCACGATGTCCGTGTAGGA 71290 29 96.6 32 ............................T GGCCCCGGGACGTGGTCCCGGGGCCTTCCAAA 71229 29 100.0 32 ............................. CCTGTTCGCCATTCTCGGCTCAGATCCCGAAG 71168 29 100.0 32 ............................. GGGTCCACGGCCGTATCGGCCTCAGCCACGGA 71107 29 100.0 32 ............................. TCGATGGGGATGGACCGGCCGTCGTACACCCT 71046 29 100.0 32 ............................. AGGTGCGACGCCTGCGAGTAGGCCATGAGCGG 70985 29 100.0 34 ............................. AGCAGGGGGCCCTCATGGTTTCGACGCCGGGGGC 70922 29 100.0 32 ............................. ACCTGGCTGTCGCCATCCTGATCTGCGTGATC 70861 29 100.0 32 ............................. GGCCCCCGGTCGGGATGAGTCCGTGCGGGGTG 70800 29 100.0 32 ............................. GCGTACGAGTGGGACGCCTTCTGTCTCGGGAA 70739 29 100.0 32 ............................. TCAATGTCCACGTCGGAGGAGTCCCGGGAGCC 70678 29 100.0 32 ............................. TGGCCCAAAGCGCTCACGATGTCCGTGTAGGA 70617 29 96.6 32 ............................T GGCCCCGGGACGTGGTCCCGGGGCCTTCCAAA 70556 29 100.0 32 ............................. CCTGTTCGCCATTCTCGGCTCAGATCCCGAAG 70495 29 100.0 32 ............................. CACCAGTGCGCTTCACTGGGCGGTGTGTCGCG 70434 29 100.0 32 ............................. TGGATGGGCACGTGCAGGATGTACGAGAAGCT 70373 29 100.0 32 ............................. CGCCCTCGTCCCCCAAGGGCGAGCCGCGATTC 70312 29 96.6 32 A............................ CGCGTGCTGTGGCTGAGCGTGGTATTCGACCC 70251 29 100.0 32 ............................. CCGCCCCCGCCAAGATCAGAGGTAGGTACGGT 70190 29 93.1 32 .C..............T............ GACGTGGCCCCCGGGGGTCCGATCTTCATGGA 70129 29 89.7 0 .....................A..GC... | ========== ====== ====== ====== ============================= ================================== ================== 41 29 99.2 32 CTGCTCCCCGCACCCGCGGGGGTGTTCCC # Left flank : GGTCACCCTCCGCTCCGACCGTGATATCGCCGTACCCGCAGGCCGCAACTACGCCGAGACGGTGACCTGGTGACCGTTATTGTCCTGACGCAGTGTCCCATCGGGCTGCGAGGCTTCCTCACCCGCTGGCTCCTTGAGATCTCACCAGGCGTCTTCATCGGCGGACCCTCGGCACGAATCCGCGAGACGCTATGGGCGGAGGTCCGCCAGTACGCGGGAAACGGCCGGGCACTACTGGCCTACAGCACGGACAACGAGCAGGGCTTCACCTTCGACACACACGACCACAAGTGGGATCCCACCGACCTCGAAGGCGTCACTCTGATCCACCGCCCCAATGACCGCCCCACCGCCACCTCACCGACCACCCGAGGCTGGAGCAAGGCCGCGAAGCGACGACGCTTCGGAAACGGATAGCAGGCCAGACGCCCTAAATGCCCGATTCAAAGAAAGTCAGCCAAAGCTGGGGCCTCCCCCGATAGAACCCCAGGTCAGTCACT # Right flank : TCCGGGCGACAACCGAGTGAGCGCACGTACCACTGCCCAAGACCGGCGCGTCGGGATCCTCGGAGACCCCTGCTGGAAGGGGCGCAATCGATCCTTGACGCAGCTGAGGGTGCGCACCGACAGCCGGGTATATCGGCTGGCTGGGGCCGGCGGAGGCACCTGGTACCTCAAACGGCACCGCGGCCCCAAGTTCCACAACCGGGAAATGGCCGCTTGTGTACGAGCGGTCAGTGACCACCTTCGAACAGCGAGCCGTAGCCTTGCCGAATGCGTGCGTGACTCTCTGGCCTCAACTCCCCCTGAGCAATGGCGAGCACAGCCCAACAGCCATCCACCGCCGTGAGCGCGGCTGCGCCGGTGACCACATCGAGTAGGTACAGCGCCTCAGGCTCGGCGGCGCAAAACCGCGGATTCGCGCACCGGCGGCACTGCCAGGTCTGACACCACCGACGGGCACGTCTGTGAGCCACCGCCGGGCTGTCGGCAGAGGCCTCTCTGCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 82872-83572 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGGZ01000017.1 Streptomyces sp. CG 926 Ga0105840_117, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 82872 29 100.0 32 ............................. CGGCCCGACGCTGCACGTCGGGCCTGCGCTGG 82933 29 100.0 32 ............................. GTCACCGGCACCTCGGCCACACCCTTGACCGC 82994 29 96.6 33 ............................T TCCGGGACCTGTTCTCGATCGGCAGATCCACCA 83056 29 100.0 32 ............................. AACCGCGTCCGGGCGCGCCGAGTGCAGACGGC 83117 29 100.0 32 ............................. GATACGGATCAGGTCGCGGAAAGGTCCGCTAC 83178 29 100.0 32 ............................. CAGCCGTCCAGGGTGTCCTCGACGGTGATCAG 83239 29 100.0 32 ............................. CACCTGCAGATGGGCGTGGGGATCGGCAACCT 83300 29 100.0 32 ............................. AGGCCCGCCATCAACGCCCTGATGCTCCCGAA 83361 29 100.0 32 ............................. ACGACCATGACGAAGGCGCTGTCCGCACCGGT 83422 29 100.0 32 ............................. TCCTGCAGGATCACGGCATGGGAGCCGTCGGT 83483 29 100.0 32 ............................. GGCGGCAGGTCCACGTCCCGCGCCGAGGGCCC 83544 29 96.6 0 ..........................A.. | ========== ====== ====== ====== ============================= ================================= ================== 12 29 99.4 32 CTGCTCCCCGCGCCTGCGGGGATGAACCC # Left flank : GTAGTGGATTCCCCAGATTTTGGACTCAAACAAGCACAGTTCGATGTGACCTGAAGGTAGGCCTGACGCACCCATCTCCATCCCCGTAGTGGCGGGGAGCAGTGGTCGAGCACAGATGGACTCATGCACGCACAGGGATCATCCCTGCGGAGCAGGGAGCAAAGCCGCCCACGCCGTCGAGCGAACATGTGGGCACGGTAGCGGACAGTAGTTGCCAGTCGCAGACACTCGGACAAAGCCCTGCCGGCCTTCGCGTCGAGTCGCCGTGATGAACCTGTCGGCTGTAGCGACTTCTGGTGCTGTGCGCTCGCCGCTACCCACGCCGGCAATCGAACCCATGTGTAGCCCCAGTGTGCACCCACCAGCCCCCGCTGGTCATCGAATTGTTCGAGGGAGCCAGCAGCCCCATCTCGTGGACGATCCCTTTGGGTGGATTGTCCGAATCTCGTGAAGTGCCCCCAAGCTGCTTGTGACCGCCCTAGAGTGCCAGGTCAGCCAGT # Right flank : CGGTCATCGGAGCCGTCAGACGCGCCCGCCACAGGCCCGGCAGGGTCCCTTGTGTTGGTTGAGGGCATGTTGGGGCCCCTAACTGTGGTGGTCCGCCACATACACCGCTGACCTGCGTGTTCCTATGGTGTGGCCACATGGAACGTCCCCGCAGACCCCCGGAAGTGGTGCACATGACCTCCCCAGCCCCGGCCGCCGCACCGGCCCCGTCCGGCATCCGGAGAATCGTCGCAGCGAGCCTGATCGGCACCACCATCGAGTGGTACGACTTCTTCCTCTACGGGTCGGCCGCCGCACTCGTCTTCAACGAGCTGTTTTTTCCCGGCAGCGAGCCCCTGGTCGGTACCCTCCTCGCCTTCCTGACCTATGCAATCGGCTTCGCGGCCCGCCCGCTCGGCGGGCTGGTCTTCGGCCACTACGGGGACCGGATCGGGCGGAAGCGGCTGCTCGTCCTCAGCCTGCTCCTCATGGGCGGGGCCACCTTCGCCATGGGCCTGCTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCTGCGGGGATGAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCTGCGGGGATGGACCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //