Array 1 31300-29608 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMQH01000012.1 Butyricicoccus faecihominis strain JCM 31056 sequence12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 31299 32 100.0 34 ................................ GTACTGGAAATCACATATGTATGGGTTTGCGCGC 31233 32 100.0 33 ................................ ATTACAAGCTAAGTACAAAACAAGATCAGTACC 31168 32 100.0 34 ................................ GCTGACTGGAACTGTCAGTCGAAGATCGGACAAG 31102 32 100.0 34 ................................ CGCTGCTGCTTATCCACAACCCCGGAACGCATGC 31036 32 100.0 33 ................................ TCCTCGGCAAGCTCCTCGCGCTCCTCCTCGGCC 30971 32 100.0 37 ................................ GGGCTTTCGCAGGCTGAGCAGACCGGCACGTACAATG 30902 32 100.0 33 ................................ AATTCCCCCTGCTATGATCTCGAAGCCACAGGC 30837 32 100.0 35 ................................ TGCTGTGCCCTCTGGTAGTAGTCTGGTACACGCTG 30770 32 100.0 34 ................................ CTTTAGCGCGTGATGATCGACCTGTTGCCGTATC 30704 32 100.0 34 ................................ GGTGTTGTGTTGAGTACGAGAAGGTACACCGCAA 30638 32 100.0 34 ................................ TTTCCAGTCATGGTGATATGCAACAAGTTGGCGC 30572 32 100.0 33 ................................ GACCATGATATGGACGCATCACGCTATTACTTC 30507 32 100.0 35 ................................ AGACCTTTGCATGGGATAACTCCAAGGACATCGAG 30440 32 100.0 35 ................................ CATCTGACCGCGTTGAGGCGTTGGCAAAGCGTCTG 30373 32 96.9 33 .....................C.......... TTCGGTGTTGAGGTCAATAATGTGCGGTATGCT 30308 32 96.9 34 ............T................... GTCCTGCTGCTTGATAGCAGCTTTACCCAGGAGC 30242 32 96.9 35 ............A................... ATAGTCGCGCAAGTGGCCGCGTTGGTACTCATCGC 30175 32 96.9 39 ............A................... TTTTTCCCTCCCCTGCGGCCCAGCGGCACAGGGGGGACC 30104 32 100.0 34 ................................ GCCAAATGATAGCTTTTTCCGCTGCCAGGCGTAC 30038 32 100.0 34 ................................ GATCTGGCTACGACCATGGAAACCAGCGTGCAGA 29972 32 96.9 34 ...........................A.... TGCCGCCAGCGGCTGTGCAGCGGCTGCGCCTGGC 29906 32 100.0 36 ................................ AAAAGTCGCGCCCTCCAGTGGCATCTTGGTGTCCTT 29838 32 100.0 35 ................................ TTGACGTTGACATCGCAATTCGGGGTTACGGTTGC 29771 32 100.0 33 ................................ GCAACAGGTGCAGGGGTCAGACCGGTGACACAG 29706 32 100.0 35 ................................ CAGTCACGGCTATTGAAAATGCACTGTGCCTCGTC 29639 32 96.9 0 .....................C.......... | ========== ====== ====== ====== ================================ ======================================= ================== 26 32 99.3 34 GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAT # Left flank : TTTGTGGAAATGAGGTGTCGAATATGCTGGTTGTGATTACTTATGACGTCAACACCGAAACAGCCGCCGGGCGCAAACGCCTGCGGCAGATTGCCAGGCAGTGCGTCAATTATGGACAGCGTGTGCAGAATTCCGTGTTTGAATGCCTGATTGACGCGGCTCAGTGCCGTATGCTGCAGCAGAAGCTGTGCTCCATTATGGATGATGAACTGGACAGTCTGCGATTTTACTATCTCGGCAGCAAGTATGAGAATAAGATTGAGCATTTCGGCACGAAACGCGGCTATGAGCCGGAGGGCGTGCTCATGGTGTAAGGCGGTGCGAAGTGTAAGCGAACCGAAAAGCGTCGGCGCTTCGCACCGGAATTTCCGATAGGATATATCCAATACTTTTATCGGATGTCAAATTTGCAGTTGTGTTTTGCACAAATCTGTGTAAAACTGTTATTGTAATTGTTTATTTTGCGAAGATCATTGGGAATAGTCTTGGTGATTTTTGCT # Right flank : TTCGGTGTTGGGGTCAATGATGTGCGGTATGCTGTCGCTCCCTTCGCGGAGCGATGGCGATAGCCGCACCACCATCCTCCCGCCCAACCTCGCCCCGGTCCCCATCCCTCACAATCTTTCACCCACCCCGACCAAAACATTTGCACATGTCATGACACATGTGCTATAATAACTCCAATACCGCTATTGACAGCGCCGCACAGATTGCTGCGGCGTTTTGCCGGGAAGGAGAAAAATCAAATGAAAGCATACTTTGACAGCATCGAAAAGGAGGTTCCGGAGCAATTACAGCAGGTTTTCCTTAATCGCCGCGATACGGCTGTCATTACGATCGACATGCACGATGGACACCTGTCAACCGATCCGGACTGTCCATGTCCGTCTCCGCGAGGACGTGAGATCATCGAACCGCTCAATCATTTCATGAACGAAGCACGCGCGCTCGGTCTGCCAATCATCCATGTCCGCTCAACGCTGCGTAAGGGCGGTGCAGACGAAAA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.80,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //