Array 1 326041-329007 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSJA010000002.1 Pantoea sp. 18069 isolate 18069_Pantoea2_Ancestor_Tube, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 326041 28 100.0 32 ............................ AGTCGGCCACGCTCAGCTGCACATCACCAGGC 326101 28 100.0 32 ............................ AGACTCCAGGTCAGCGCTGTAGCCTGTGTTGA 326161 28 100.0 32 ............................ TCCGCCACCTCCGAGCTCATCACGCGGGTGAC 326221 28 100.0 32 ............................ AGTCCCGATCACTGTTGCCATGCCAGCAAGTA 326281 28 100.0 32 ............................ ACAGTAGTGACCGCCGTAGGCCGCGCGGACGT 326341 28 100.0 32 ............................ GCTGACGCACAACTACCCACTGGGCAGCTATC 326401 28 100.0 32 ............................ AGACAGCGGCGAAACATCGCCCTTGACCCACT 326461 28 100.0 32 ............................ GTTGCTGACCGTGGCCGTCACATTGCCCGTGT 326521 28 100.0 32 ............................ TTGATTGAGGCTCGTTTGCCGGTTGGTACGGG 326581 28 100.0 32 ............................ CGAAGACGCAGCAACTCAGACGCCTCGGTGAT 326641 28 100.0 32 ............................ ATCACGCGCAAGCTCTGCCGCAGTCTTTGCAT 326701 28 96.4 32 ....................T....... GTGCAATGTTTGCACCTCTGGCCGAACAGCTC 326761 28 100.0 32 ............................ GTCCCAGTCGGACAGATCGCGCTCGCCCTCGG 326821 28 100.0 32 ............................ AAACTCGGAGATCCCGACGAACGATGCAAGTC 326881 28 100.0 32 ............................ AGCGCCCGCAGCCGTGGCAGTGCCTGAACTGC 326941 28 100.0 32 ............................ AGGGCGGCTACCGCCGAAGCGATCCGCTTGCC 327001 28 100.0 32 ............................ AAGGCGGTCGCTGATTTGACCAAGTGCTTCGC 327061 28 100.0 32 ............................ GGCACGTTGAATGTGCCAGCAATGGCCTCAAT 327121 28 100.0 32 ............................ ATGCGCGTACGGCGTGGCCACAGCATGGGGTT 327181 28 100.0 32 ............................ ATTTACCGACACGCTGGTCATGGGCAGCCAGA 327241 28 100.0 32 ............................ GATCATTTTTTACTCACTTTCGTTCGGTGCCT 327301 28 100.0 32 ............................ TTGAGCAATTCCGTCTCTACGGTCGACGAACT 327361 28 100.0 32 ............................ CAGGTCCGACAAAAGAGGCTCCACCTCCTGCG 327421 28 100.0 32 ............................ ATTCGTGAAATGAAGCACTGCGCCAGGGCCAC 327481 28 100.0 32 ............................ AATAGCGCCTATCGCTGGCAAGAAGGCACCGT 327541 28 100.0 32 ............................ ATCGGTGACCGGAGAGAATTCGGTCTTGGTGT 327601 28 100.0 32 ............................ GCAGCCCAGGTGCAGGCCATGGGCTGCGTGCC 327661 28 100.0 32 ............................ ATGGCCAGAGAGAGGCAGCACCAGGCTGCCGT 327721 28 100.0 32 ............................ TCAGTGATGCCCAGGCAATAGCAAAGCAAAGA 327781 28 100.0 32 ............................ TGATAGATCGACCGGGCCAGATTGCCGCTGAC 327841 28 100.0 32 ............................ GTCGATCACATCGGGCACCATCGCGAAATCGC 327901 28 96.4 32 ...........A................ CAGCGCCACGGTATACGGCCGCATGCTCGAAA 327961 28 100.0 32 ............................ TGACACTGCGCGATGAAGGCTTGAGCGCATAC 328021 28 100.0 32 ............................ AGATCACGCCAGCTTGGGGCCGATGCCGGAAT 328081 28 100.0 32 ............................ CGAAATGGCAGTTTGAATTCACCGGAGCGTTC 328141 28 100.0 32 ............................ TGGCTCCAGAGCCACCGGCACGTTGAATGTGC 328201 28 100.0 32 ............................ AGCGTGGGCACCCTTCCCGGGGCGCTGTATTT 328261 28 96.4 32 ...................A........ TGGTTGAGCTTCGCCACGTTCGCTGTCGCCTC 328321 28 100.0 32 ............................ AGGGCAACCTTGTCCAAGTTGGACACCACGGC 328381 28 100.0 32 ............................ TATCGCAGGGCGCTGCAAAGCGAGATCAGCAG 328441 28 96.4 32 ...A........................ GCCTGTCGACCATGAGCCTTTACCCTGGCGGC 328501 28 100.0 32 ............................ GTGTGCAGACCGTGTTCGACCAAGCCACCTGG 328561 28 100.0 32 ............................ AAGTGCAGGCCAACGCGGCGCCCAGCCACCAG 328621 28 100.0 32 ............................ GTACATCCGCTTCTACAAGCGTGACGATGCCA 328681 28 100.0 32 ............................ GACAGGTGCACCCAGCGCTTGGCGCTGACACT 328741 28 100.0 32 ............................ CAGAGCTTCCAGGTAGTGGCCGGCTCGCTGCC 328801 28 100.0 31 ............................ GTGCTGCCGAGCTCAAAATCGACCGCCCACG 328860 28 100.0 32 ............................ ACAACGGGCATTACCGATGTGCGCGACAACAA 328920 28 96.4 32 ...............A............ AGAGATACGCTTGCCGCTTTTCCAGACGTGCT 328980 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 50 28 99.6 32 GTTCACTGCCGCATAGGCAGCTCAGAAA # Left flank : GCCGCTTTGCAGCCCTGGGCAGCTGGAGCGTGGCTCGGCAATGTCCGCGACCATGTCAGTACCACCGGACCCTTGCCGGTGCCGGCACATGCTGCACACCGCGCTCTGCGGCGAACTCAAGTCAAAAGCAGCCCCGAACGCCTGCGCCGCCGCCTGATGAAGCGCCATCAGCTCAGCGAAGAGGAGGCCCGCCAGCGCATCCCCGACAGCGTCGGCCGGATGAGCGACCTGCCTTATATACAGATGGCAAGCACCAGTACAGCCCAGCAATTCAAGCTGTTTCTGGCCTTGGGCCCCGCCCAGCCTCAGCCCAGCCCAGGGGACTTCAACGCCTATGGCCTGAGTACGACGGCTACCGTACCGTGGTTTTGACCCTTTTTTAAAGCGCCTGCCGCAGCTTTTACAAATCAAGCACTTACGGTGGAATGAAATAAAAGGGTCTCGCCTGCAAAAATGCTTGAAACCCTTGACCAGCAAGGGTTTCGGGCAAAATTAGTCAG # Right flank : ATTGACACGTTCCGCGCTGCGCCAAACTGTGCAGTTCACTGCCGTACCCGCGGAAGAAGCCCGCATCATGCACGCATCGCGCCCTCGAAGACGTAATACGGCGCGGCAAACTTTTCGTGCCAGAAACCGTTTTGCTCACGGGTACCACCCAGGCGATCGTGCGAAGTCAGTCAGAGGAATGTCAACTCCAGACCGCAAGCTCATTGCCGCTGGGCTCGGTGAAGTGAAAACGGCGCCCGCCCGGAAAGGAAAAGATGGGCTTGACGATCTCACCGCCCGCTGCCTCGACCTTGGCCAGCGTTTCTTCGAGGCGTTCGCTGTAGAAGACGATCAGCGCACTGCCCTGGGCGGTGCTGGCCGCGCGTTCGGCGCGGTAGAAACCACCGTCGAGGCCCTGCCCGGAGAACGCCATGTAGTCGGGGCCGTAGTGGGTGAAGGTCCAGCCGAACGCCGCTGCGAAGAACGCTGCGGTCGCCTCGAGGTTTCTCGCGGGATACTCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //