Array 1 672160-671518 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP054135.1 Streptococcus oralis subsp. oralis strain ATCC 10557 chromosome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
    672159	    28	  96.4	    33	...A........................	TGATAAAACTGTAAACAGAACCTTGATAATAGA 	
    672098	    28	  96.4	    33	.......................A....	TGTACCACGAAGCCATAATACTAAAGATGGGTT 	
    672037	    28	 100.0	    33	............................	TAGTTTCTACTGCCGTTCGGTATTTCTCAGGTA 	
    671976	    28	  96.4	    33	.......T....................	TGCCAAACCTAGACCGAACATAGCTAATCCCAA 	
    671915	    28	 100.0	    34	............................	CAAATCTTATACGGCTGAATAATTGTGTCATGAT	
    671853	    28	 100.0	    33	............................	TATCAAAGTTATTGATATGCTTAATATCTGCCT 	
    671792	    28	 100.0	    33	............................	TATCAAAGTTATTGATATGCTTAATATCTGCCT 	
    671731	    28	 100.0	    33	............................	TTCACTTTAGAGGGTGCTAGTGGTTCTCTTGCT 	
    671670	    28	  92.9	    33	.......T................T...	TGTAATGTGCCGTTACTTCTGCCACAATAGCAA 	
    671609	    28	 100.0	    33	............................	TGGCGAACTTCACACAGACCAAGCTTTTAAAAC 	
    671548	    28	  78.6	     0	.......G....T...TA..A.....A.	|                                 	C,TA [671521,671525]
==========	======	======	======	============================	==================================	==================
        11	    28	  96.4	    33	GTTTTTCCCGCACACGCGGGGGTGATCC	                                  	       

# Left flank :   ATGAGAATGAACATACCATTATAGAAATTGGGGCACTTAAGGTTACTCCATCCACTACAGAAGAGTTTAATGCTCTTATCAAATATGACGGAATCTTGCCTACGAAGATTTCTAAATTAACGGAAATTTCTCAGGCTCTATTAGAACAAAATGGTCGAGATTTAAAAGAAGCACTTTCCGATTTTTTGCTTTTTATAGGTGAATCAGCTTTAGTTGGCTATGGTATCAATTTTGATGTTAAGTTTATTAACAATGAGCTTAACAAGTTAGGTTTACCTTTATTAACAAATAAAACTCATGATTTAAAGAAATTTGTAAAGAGTGAAAAGCTATTTCTGGCTAACTATCAATTACAGACAGCCCTTAAGGAATATGGAATTGAGGAGGTAGTTCCTCATAGAGCTTTACAGGACGCTAAGTTAATCTACCAGTTATCAATAAAAGTGAATAAATTTTTGGATAGAATCAATCGGGATTAGCGATTTCAATAGGATCTTTTA
# Right flank :  ATAAAATGAGATATAAGAAAAATATCCCTATTGAAAACTGATAAATTAGAGATAGGAGTGTTTTATTATAGGAAAAAAGCATATTCTGTGTAAATGAAGATATCTTACATAACAAAGGAGAAGACAAGTGAATCGAATGAAGTCATCATGGAGACATTTGGTAACAATAACATCAGTTGGGTAAAAAACTTGTAGAAGAGTATAAGAAAATTTGTCTTGTATCTGTTGCCTTAGAGTGTTTCAGAACTAAATGTTCAACATTTTTTGATTGGAAAAACGAGACTAAAATCCTTCTGCCAAATCCCTAGCTCTCCTAGTAGGTGCTAGTGAGTCTGAAGTTGCTCCACTGGTCGAGTACTTGATTGCAGACAAAAACTTTAACTTAGAGACAGCCCAGCGCTATCTGGAAAATTTACGATCATAAAAAACTCAGACGAATTTGTCTGAGTTTTTTGTACTTATATACTTTTTCCAGGCAATAGGGTGACTGGTAAGAAGTA

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTCCCGCACACGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-9.80,-9.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [2-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.78,4.77   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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