Array 1 468588-468941 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT960488.1 Parabacteroides provencensis strain Marseille-P3668, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 468588 47 100.0 30 ............................................... GGCATGGGAGATGTCCCATTATCAATATAG 468665 47 100.0 30 ............................................... TAACAGGCTGGCTGATGAATTTAATACAGA 468742 47 100.0 29 ............................................... TCCATCAATAAAGATTTATCGACACAGCC 468818 47 100.0 30 ............................................... ATGTCTATATTTTTTTAGAAATCCTCGTTT 468895 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 5 47 100.0 30 ATTGTATTCAGTATGTCAAAGATAATAGTTTGAAAGCAAATCACAAC # Left flank : CAGCTTCATTATACAAATGTTTTAGTGGTGAACTTCGCCACATAGCATATCCGGAAATATGAATAGATTTAGTGAATATCGTATTATGTGGGTTCTTGTATTTTTTGATCTCCCGACAGACACAAAAAAAGAAAAGAAAGCTCATGCTGACTTTCGAAAGAATTTGCAAAAAGATGGTTTTACTATGTTTCAATTTTCTATCTATATACGCCATTGCGCAAGCGTTGAAAATGCAGATGTACACATAAAAAGAGTTAAATCCTTTCTTCCACCCAATGGCCAAGTAGGTATTCTATGCATAACAGATAAACAATTTGGCAACATTGAGCTTTTCTTTGGTAAAAAAGAGCAGCCTGTTAATACCCCAGGCCAACAATTAGAACTTTTTTAAAATAAGAAATCCTGCTTTTTAAGTAGGATTTCTTACTGAATTACAATCATTTTTTATTTTCCCAATCACACGCATTAAGCACTGAATTCCAACTAATTGCAGACAGTCT # Right flank : CGCAACAGTGGTGGGAATGAATTTGCCACATGTTGTATTCAGTATGTCAAAGATAGCTAAAACTAACCGATTATACCAAATATTGATTGAACGGATTTTTCAGATATCGGAAATTGATTCACATCTCTGCCATTTTTGTTTTCAAAGAATAACCACTAAGTACTATGTAGTCGAAAAGGGACTAAAGTCTTCATCCCCGTAAGATAACTTGACTTCTGTAATTTGCAATCCAATATTATGATGACAAGTAAAACTATCTATTTATTTTCAGCTCTCAATTAGAAAAATAGAACATTCTATCACCCACAGAACATTCCGCTGTTTATACTAGAATAAGCGCTGATCCATTAGAATTTTTATTAAACTCACATCGCCGGCTTGATACCATTCTTTACTAAAAACCAATTCATGGGATAAGAACACAAAAAACCGGCACACATTGCCAATTGCATAATAAACCAAAATAAAAAAGTATCATGCGGTAACGAATAAGGCATTGC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTATTCAGTATGTCAAAGATAATAGTTTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 685817-686582 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT960488.1 Parabacteroides provencensis strain Marseille-P3668, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 685817 33 100.0 34 ................................. GTCCGGTGGCATGAGAACTATCACAAACGAAGAA 685884 33 100.0 35 ................................. AGATCCATCCCCCGGAACGGTATTTATACCATTTC 685952 33 100.0 33 ................................. AGATTTTATATCGGAATATATAGGTAGCATTGG 686018 33 100.0 33 ................................. TGTAACAGGATCAGGAAATGTTGTTACTAATGT 686084 33 100.0 33 ................................. CGGGACGTACGGATGCTTATACCCCTGCATCAG 686150 33 100.0 34 ................................. GCTGTGGCGCTTGCCAAAGAATTGGGCACGGATG 686217 33 100.0 33 ................................. CAACGATTCCAGTAGTGTGTCCGTAGAAGGTTT 686283 33 100.0 34 ................................. GGCATGGTAGTTTACCCGATGACATCCATTAACC 686350 33 100.0 35 ................................. ACAACTAAGCTTTAACTGTTTAAATTTAGCCGGAT 686418 33 100.0 33 ................................. CACCAGTCAGCATATAAAAGGAGAGGCGGCTGA 686484 33 97.0 33 ...............A................. GCGGCAGCGGGATTACCGTATAATGGCAAGTAT 686550 33 93.9 0 ............G...............A.... | ========== ====== ====== ====== ================================= =================================== ================== 12 33 99.2 34 GTCGCGTCTCATACGGGACGCGTGGATAGAAAC # Left flank : AGGGGACTTGGACAATTATCCGGTTTTTTTAATACGATAAAAATATGATGATATTGATTACATATGATGTTGAAGTTTCTTCGGAAGCAGGCAGCTCGCGACTTAGAAAAGTAGCAAAAGAATGTCAAAATTATGGACAACGCGTTCAAAACTCAGTTTTTGAATGTGTAATAAATGAAGCTGATTTCTTATTTTTACAAAATAAAATTAAGTCAATCATTGATCCTGAAAAAGATAGTATCCGTTTTTATTTTTTAGGAAAAAACTGGCAAAAGAGAATAGAATGTATTGGAAAAGTTACATCTTATGATGTAACATCTGAATTGATAATTTAAAGTGCGAACCTTTAGTGATACAAAAATTGCTAGATTATCGCACTGTTTTATTTTCAACAACTTATAAATAAAACATTAGTAAATATTGATTTATAGAACGTAAAAGAATACTTTCGCGAAAAGTACTTTTTTTCAGACTATATATCAATGTCTTATTAAGCAAGA # Right flank : CATAGTTTGATCAATCTCTTCGGTCTACTTTGTGTCAAATGTAAACTAACTATACATTTGCCAGAAGAACCATAAAACAAAAAAAGCCACTCCAGGATAATCCGGAAGCGGCTTTCTTCTATGACGTTTTACAACTATTTCTAAAAGCTATTACTTACTTTGAGATGAATAATTTTTATTCAGATATTCTATCAACTCACCTGTAATATCATAAGCATCACCAGCCAATAAAATATTATCACCTACAGTATTGCTGAAAATTACCTGGAAATGTTTATCCTTATTAAATTCTTTCAACTGTGAAACCAGTGTATCACGAAGTTGCTCACTTACTCTCTGTTGTTCAGCAACCAATTCCTGAGCCAACTGATTATCCAAGTTCTGTAGTTCCTGTTGTTTATTGATCAAACGTTGTTGTTCAGATTCTGCGCGTTCACGGGTAAGAAATGCGTTATTTTCCACTTTACGCTGAAAGTCCTGCATTTCACTTTGCAATGACC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCTCATACGGGACGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //