Array 1 3535638-3535852 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGTPS010000001.1 Streptomyces sp. MW-W600-10 utg000001l_segment0_segment0_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 3535638 29 100.0 32 ............................. TGGATGCACGGCCGAGTGCTGCCCATCCGTGA 3535699 29 100.0 32 ............................. GTCGAGGACATCTGGGTCGCGAACGGGGACCA 3535760 29 96.6 35 .........................C... TTGGCTGCATCGTTTCCGGTGGTGTAGGTCGTTGC 3535824 29 82.8 0 T.....T....A............C...G | ========== ====== ====== ====== ============================= =================================== ================== 4 29 94.9 33 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CTGACATGCCCAGGCGCTCACGCGCGACGTGCTCCTGGGATCTCACAGCTGTCAGATCGTTTACGGGACAGCCTCCAGTCGACCTGCGAGCCGGTATCGCTCCGGCCGACCGAGTGACCACGAACCTGCGCCAGAAGGCGAAGTCCCGCATTTCCGGAGACACATGTGCGGGAAGCTGAACTGAGCGTCGTGCCGATCATGGCGAGCCCTCAGGCCCGCTGCCACGTCCAGGCAGCTGGTGGGTACCGGCTGGAGTCGTTCTGGGCCACATCCTCAGCCGGTCCGTCCCACCGCCGGTGCGGCTGGAGTTGGAGCGGTTGGGTGGGGCAAGGTGAGGGGCGAGATCCGCCGTAGGAGGGGAAGCGGTCGGGCCTCGGTTGGCACAATGGGACAGTGAGCGCTCGCGACACAGGCGGCCTGCGACTTGAGGTAGAGATGTCCGTTTTTCAAGAAGTGATGAAAAGTAGCCTCCCGGCCGCATAAACCCCCAGGTCAGGAAC # Right flank : GGATGCGCCCCGGGCCCTCGTCCTCTAATCAGGGAAGAGACGAGGGTGCTCCGCCGCGAGCGCCCCCGTGATCGCCTCGTCGGTGGGGTCCGTGACGTGCCAGCTGTGCTCAGAACCGTGCTCGGCGAAAAACTCGCACGCCTCCCTCCGCACGTCGAGCGCAGAACACCACGGCAGCGACACCGGGCGGGCCCGCTCCGCGTTCCATCGGGCCCAGACCGCGCTTCCGGGCCGCCCGCCCTCGTCCCACAGCATTGCCGCGTGATCATCATCGTGGTCCTCGCCCAGTTCGCAGAGTACGTATCCGGGTTCCGGGCGGTATCCGGAGACGGACAGAGCGAGCAGGAAGTCCGGAGGGCGCAACAGCACAACTTCCGTGCACTGCTTCATGGTTATGGCCGTCCTCATACGTTGTCGGGACCGTCGCCGGATACGAGGCGTTCGGCCAGCAGGTCGCCGAGCGGGTCCGTCACGCTCCAGGAATGGGGCGCAGGGTGGTG # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 49222-48895 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGTPS010000004.1 Streptomyces sp. MW-W600-10 utg000004l_segment0_segment0_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 49221 37 97.3 37 .............C....................... TCCCGGCGGTCGGTGAACGTGACGGGTACCGGCGGCA 49147 37 100.0 35 ..................................... ATCAGGTAGCGGGCGAGCTTGCCGGACTCGCCCCG 49075 37 100.0 35 ..................................... CGTTTCCCGTCCTGTGGGCCGGATGGCCCGTGACC 49003 37 100.0 35 ..................................... AACGCCCGCGACAGCCAGTTCGCGGACCTGAGCTG 48931 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 99.5 36 GTGGCGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Left flank : CCTGTACGTCTTCACCCACGACGACGCATTCGGCCGCGCCCCGTCCCACGAACTGTTCGAACGGATCACCGTCAAAGCCCGTGGTGACAGCAGCGCCCGCTGCTTCTCCGACTACGGCACCATCGAAATCCGGGACACCGACCTGCCCGCCGGCGTCACCCTGACCACCCTTCTCCCGCGCTCCGCCTGATGAGCGGCGACCTCAACGCCCAGGGCGGAGAGCGAGACCTCCTCCAGGTCTCGCTCTCCGCCCTGGAGCACTACACCTACTGCCCCCGCCAGTGCGGCCTCATCCTGCTCGAAGACTCCTTCACCGACGACGCGGCCACGGTGCGCGGTACCCTTCTCCACCAGCACGTCGACACCCCCGGCAACCGCGGCCGCGGCGCCATACGCACCGTTCACGCGCTTCCTGTCTGGCACGACGGGCATGGGTTGACCGGGATCTGCGACACCGTCGAACTACATGCTGACGGCACCGTTCTAGCAGGTCAGTCAGG # Right flank : ACCTCGATGTCGGAGGGCGAGGCCCTCGCCGCCCACCGCGCCACCTGGAACGCCACCCGAGAGCGCATCACCCCGACTTCCAGGCGGTCGCCGAGCGCCAACTCCGCGACCGGATCCGGGAACCGGAGAAGCACTTCGCCGACGGCCGCCAGGCCCTCGCTGACCTTCGCGCCCGCGCCGATGCCCAGCAGCGGGTCCGGTCCAGTGACGTGACCCGAGCGCCATCCCCTTGTAGAACACGTTCCGCATCACCCCGCCTGGAGGCAGCCCCGGCCGGGCGAAGCGTTCCCCATCCTGTTCTGGGAGAGCAGCGAGAACAAGGCCGACGTCTCGAAGGTCGTATGGCTCCTCACCGAGTCGCCGGTCAGAATCCCCGGCGCGCGTACGAACCCGACGGGCGCGAGACGGGCAGACTCCGCCTCGGCGACGACGCCCAGATCCGCCTGCACTCCCGACTCGGCGCGTAGGACCCTGCCGGTACACCCGGTGCTCGATATCCA # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-18.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 57625-55618 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGTPS010000004.1 Streptomyces sp. MW-W600-10 utg000004l_segment0_segment0_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 57624 37 100.0 35 ..................................... TCGACCACGGCGCGGACGGCTTCTTCGTCGCCCTC 57552 37 100.0 35 ..................................... GTCCACGTGAACGTCCTGACCGCGACCGGCGAGTC 57480 37 100.0 36 ..................................... GGCCAACGGGTCCGACGTGAGCGCGAGCGGAAGGGA 57407 37 100.0 36 ..................................... TGGAAGGGCCACGACCGTAGCGAGAAGGGCGCGGTG 57334 37 100.0 36 ..................................... CTCTCCCGCCGCGTCGTCGTCTACAAGGAGGGCCGC 57261 37 97.3 37 ......................C.............. CGGCACAACCCCACCGGTGCGGACGCCATCGCGGCGG G [57228] 57186 37 89.2 35 ..........C....GAA................... TTCCGGGACAGCTCGGCGCGCTCGGCATCGGTCAG 57114 37 91.9 36 ..........C..C......T................ ACCGTGATGACCCCGCACCAGGGCCTGCACCTGTAC 57041 37 94.6 36 ..........C.......A.................. ACACTGGAGGGGTGGACCGACGGCAGCGGCGAACAG 56968 37 91.9 36 ..........C..C......T................ TAGCGACAGAGCAGCGTGGCGGCGCTGGTCGCGGAG 56895 37 91.9 37 ..........CT..C...................... GGGAAACCTCATCACCGCCGCCCACACCAAGTTCGGG 56821 37 100.0 37 ..................................... AGCCGCCGCCTGTACCGGGGCGAGGACGGGACGCGGA 56747 37 89.2 36 ..........C...G.C................T... GCCCTGACGTTGACGCCGACGTCGGCGAGGCCGGAC 56674 37 94.6 39 ..........C..............A........... GTTGGAGGGTGGTTGCGAAGACGCACCCCCGGGGGGGGC 56598 37 86.5 35 ...........T..C.......A......GG...... AACAACCTGGTCGACCGGGCCGTCGAGGCATACGG 56526 36 86.5 34 ........-.A..C...A..T................ GCTCCCGCGCCGATCCGGTCGCGCTGGATGTCCA A [56509] 56455 37 94.6 36 ..........C..C....................... TGACACCGGGAAGCTTCTGCCGAGCTTCCCGAAGGG 56382 37 91.9 35 ..........C..C...C................... CTGATCGCCCTCGTCTTCGCCACCAGGCCGACACG 56310 37 91.9 36 ..........C..C.T..................... ATGCGCTCACGCTCCTGTCAGAAAACGGACTGCCTG 56237 37 91.9 36 ..........C..C.G..................... GTGTTGAGCGGCAGGCGTAGTGGTGCTCAACGGTGA 56164 37 94.6 36 ..........C..C....................... CGGCACAACCCCACCGCGGCCCACACGAAGTTCGGG 56091 37 97.3 35 ..........C.......................... CCCCGGTGGGCCGGGTCCAACTGCCAGGCTCCCCG 56019 37 94.6 35 ......C...C.......................... GAGGACAGCACCATCAGCAGCAGCCCGAGCCGGTC 55947 37 94.6 36 ..........CA......................... GCCCTGACGTTGACGCCGACGTCGGCGAGGCCGGAC 55874 37 94.6 37 ...........T..C...................... CACTTCGACTCCACCAAGGCCGCGCTCACCGCGGCCG 55800 37 89.2 37 ..........C....GAA................... GCCGAATGCGCCTGATGGGAGCGCGGCCGGACGGTGG 55726 37 97.3 35 ..........C.......................... CTCCTGCCCCCGAGCCGCACCGCCGACGACGTCGC 55654 36 78.4 0 .C..A.....C...-..A....A..A........G.. | A [55637] ========== ====== ====== ====== ===================================== ======================================= ================== 28 37 93.7 36 GTGGCGGTCGTCCTTCGGGGCGGCCGAGGATCGCAAC # Left flank : AACTGGTGGCCGTTGGTGATCCCGAGGTAGGCCACTCCGGGTAGAAAGAGGACGGCCGCCGCCCCGAAGCCCAGCACCTCGCCGCGCTTTCGGATCCTTGCCACGCTTTCCCCCTGCTGTCGACGTCTCACCCGGCAACTTACCGGCCACGCACCGGCGGATCCGCCGATCGACAGGAAGGGCCGGAAGAGATCTCCAGGCAAGGCTCGGTCACCTGAACCTGGGGTATTTCGCCTGGGGGCAGCCGTGAGCGGCGGCGGGGTGCCCGAACTCGCCGGGCGCGTGAGGGCCGTGGTGGAACCTATATTCGAGGGCCTCTACTCTGGCAATACTTGGGTCCACGTGCGCGACACGTGGACTTTCCCGATTGCTTCGGAACCGGAAGCACACACGCGACACGCGGACCGCACCGAAGCCGTATGCCCGAATCCACCGGAACTATCACCTCCAACGCGCTCCCTTTATGAAGGGCGCTAGGCTCTTTGTACTGTTCAGGCAGG # Right flank : GGCTGTGTCAGTGACCAAACTTAGGGTGCCGGTTACGGGGAGGTTGGTGGTTCGGCGGTCAGGGGGTCAGGTGTCAGAGGTTGGGTTGTTCGCCCATAGTCGTAGTCCGCGGTCGGGGTGCCGGCATCGGCTCGAGGATCATCTGCGTGGCTCGGCTGCTTTGGCCAGGGTTTTCGCCGAGCGTTTCGGTGCTGGGGATGTGGCCGAGTACCTGGCGTTGGTGCATGACGTGGGGAAGGGGTGTTGTGCCTGGCAGGATCGGTTGATCTTTCATGCTGAGCCGATGGGTAGGCCGGTGGGGATCCCGCATAAGGAAGCCGGCACGGTGCTTGCTGCGCGGACGGTGGGGCGTCAGCTGGCTGCTGTGGTGCAGGGGCATCATGGAGGGCTGCCGGATCAGAAAAAGATCAAGGATGTTCTGGCCGAGCTCCGGGGGACCGGTGTGGACGCGGACCGTGCTCGGGAGGCGACGGAGGCTGTGGCCCGGGTGGTGCCGGAGA # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGTCCTTCGGGGCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGGCGGTCGCCCTTCGGGGCGGCCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-14.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [26-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //