Array 1 81596-84131 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCKV010000020.1 Phocaeicola vulgatus strain DFI.4.72 LADGGNNE_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 81596 33 97.0 31 ................................T TGTTAAGGTAAACACCCTCTGACTTCCCATT 81660 33 97.0 31 ................................T TATAGATAAGCTGAATGCCCCACGCTATAGG 81724 33 100.0 32 ................................. AGCGTTGGTTTCCTGCCAACACCACCAGTTTA 81789 33 97.0 32 ................................T ATGATGAACGCTGAACAAAACGCTGCTCTTAC 81854 33 97.0 33 ................................G CTTATTCCGGTATCCGAATATAGTTGCGCAGAT 81920 33 97.0 33 ................................T CGTCTGCTTGCAATGACGATAGTACTTCGATTA 81986 33 97.0 33 ................................T CTCTTTCTTGTCTATAAACGCACAACTCACACT 82052 33 97.0 33 ................................C TCTCTTGCTACAGCTGTTTTGCAATCTGCTGGA 82118 33 97.0 32 ................................T TCAGCAATTGGCTAGTGAGAAGTCTGAACTTA 82183 33 97.0 33 ................................T CTCTGGGATTTGAAAAATACTAATATTCTTAAG 82249 33 100.0 33 ................................. TTTTACGATAACTAGTGCTCATCGTACTCCCGA 82315 33 97.0 32 ................................T CTAATACGATACAATATAATGTATGTGCGTAT 82380 33 97.0 31 ................................T TTAAAGTAAAATATTATAACTTTGTCTAAAA 82444 33 100.0 33 ................................. TTGGTATGGTTGTAGTATATCACGTTTTTAAAG 82510 33 100.0 32 ................................. ATTGTCCATTGTATAGCATGTTGTGCAGCCTG 82575 33 97.0 34 ................................T TTGTCGCTGTTTTTAATGTGGTAAAAGCCATTTT 82642 33 97.0 33 ................................G CTTCGTGGCTTGTAATTTGCCCGCCAATCGTTT 82708 33 97.0 34 ................................T TTTCTTGAGTATCTGTTATGCTCTAATGTTCATT 82775 33 100.0 33 ................................. TTTGGTGATCGTAATCGTCATCAGGTGATTGAT 82841 33 100.0 33 ................................. TAGATATTCGGATAATGTCCATGTGTTTGATCA 82907 33 100.0 32 ................................. AGGCACTGTGTCGTATGACCGTGAAATTAAGG 82972 33 100.0 33 ................................. ACTGCGTTACGCGAATTATCCGAAAGATTACTT 83038 33 100.0 33 ................................. CTCATTATAAAATTATTATTTACCAACACAAAA 83104 33 97.0 32 ................................T ATATACTTCATAAGGATGCTAACCCGTTTATC 83169 33 97.0 32 ................................C GTTACCAAAGATGGCTGCAATCACAATCAATG 83234 33 100.0 33 ................................. CTGAACGCTTAGTTTTATGAATGAGAGAAGAAA 83300 33 97.0 34 ................................C TTCTCCACAGGGTAGGGAACCTCTACCTTTTTCT 83367 33 97.0 36 ................................T CGGCCATAGCAATGGCAAGATAATCATATACCAGTG 83436 33 97.0 33 ................................T TTGTTCGGCGCCGTTTTTGCCCACGAGGCAAAA 83502 33 100.0 33 ................................. TGCTTATCAAGCTGTGGCGGAACGTGGAATGAA 83568 33 97.0 34 ................................C CGACGTGGTAGATGAGCCTTTTTTAGCAAGCAAA 83635 33 100.0 32 ................................. TTCTTTAGAACAAGACTTTGAATATCATCATA 83700 33 100.0 34 ................................. AGCTGATGTTGCTTTTGTTTGGTGACAGAAGCAA 83767 33 97.0 34 ................................C ACCATACAACAGCCAGCAAGCGACAGAAATCAAA 83834 33 100.0 32 ................................. TAGCAGATCCCATCCCTTATAGATATCCTCCA 83899 33 100.0 33 ................................. CTTATAGAGATTTGACAAACAGATATAGGGTAT 83965 33 97.0 33 ................................C GTCTGTCTGTGGAGATACACCCGGATGCGGAAT 84031 33 100.0 33 ................................. CGCAATCCACCACTATCATAGCTCGGATGAACT 84097 33 93.9 0 ....................A.........G.. | TA [84116] ========== ====== ====== ====== ================================= ==================================== ================== 39 33 98.2 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAGGGTATTTCTTTGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : ATTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAGTCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTCAAAGCAAATATATTATATTTTTATTATACTATCCCTTGTCGTTTATTTGTTATATTGTTGGTTATTAATGTATTATTATCTGTTTGTATCGATTGTTTTTTCTTGTCTTTATAAGATATATTAAAACATAAACTAACATGAAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGGA # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.57, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //