Array 1 22924-20175 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBHA01000124.1 Kitasatospora aureofaciens strain NRRL 2209 B2209_contig_124, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================================================================================================================== ================== 22923 29 86.2 32 C..........G.GA.............. GCCGGCGTCGGGACGATCGTCGCGGGACCGTC 22862 29 86.2 32 C..........G.GA.............. GAGACCTTCGCGGGGGTGACGGTGCCGGCGGT 22801 29 86.2 31 C..........G.GA.............. CAGATCTTCAAACTCGCCGTGGACAACGGCG C [22773] 22740 29 86.2 32 C..........G.GA.............. CGGCTGAACCTCGTGCGGGGCATCGTCACGGT 22679 29 86.2 32 ...........G.AG.......G...... CCGAGAGTGCTGGACTCCCGAACCGCAAGGAA 22618 29 89.7 32 ...........G.AG.............. AGCGAGGGTTCCTAACCAGGGAAACCGGAACT 22557 29 86.2 32 ...........G.AG...A.......... CCGAGCCGGCGGAACCGCGCTTCCATGTCCCT 22496 28 82.8 32 ....GT..-..G..T.............. GGGTTCATCATCGACCAGGAAGTCCCTGCAGA 22436 29 100.0 32 ............................. CCGAGGCCCGGGCCACGGAACTGACCGAGGAA 22375 29 93.1 32 C............T............... ACCTGGAACGTCTCGCGGTAGTCGCGGCCCTG 22314 29 100.0 32 ............................. CCGCGGGCCTCGTCGGGGTAGTAGCCGGCCTC 22253 29 100.0 33 ............................. CGCTTCACCGCCCCCGCCGTGGAGCGTCGCGGA 22191 29 89.7 32 .....T.....G..T.............. TCAGGTGATGGTGCGCCGCCAGAGGTCCCCCT 22130 29 100.0 46 ............................. CTGCCGTTGACCGTGATGCTGCGGTGGCCGTGGTCCTCCCCGCACC 22055 28 75.9 2 .C.G.......G..T......-..CC... TC Deletion [22026] 22025 28 72.4 133 .G...T...-....A..AC...C.C.... CGGACTTGTCAAACGCCGACCATGCGCCGCGTGACACGATAAGAACTCGCACCTTGACACCACAACAGCACACCAAGTGGCGCAGACCAGTCGAGAAACAGCAAAGCCGCTGCTGCGCCGCAGGTCAGAAAGC 21864 29 86.2 32 C..........G.GG.............. GTTCCGTCCTGGATTTGGCGCCTGTAGGCGTC 21803 29 86.2 36 C..........G.GG.............. CGGTCGTCGTCGAGGTTGAGGCCGAGCCGAGTGTGG 21738 29 89.7 32 C........A.....A............. GCGGTCTACGCGTTCTGGCGCCTGCCCGTTGA 21677 29 93.1 32 ...........G..T.............. GAGTTCGACCCGACCGCGCTGGTCAAGCGCGC 21616 29 100.0 39 ............................. CGGTGCACGCGGGAGGCCGGGCCGTCGAGGGTCGGCGTC 21548 29 100.0 34 ............................. CTGGGCAAGGCGAGCATTCAGCCGAACCGGGCTC A [21520] 21484 28 82.8 32 C...C....-......T....A....... CGGCATGCCTCGGAGGACTCCGTCAGGAGTCA 21424 29 96.6 32 ..................C.......... CTCGCCGAGTGGATCGCCCGAACAGGGCTGAG 21363 29 96.6 32 ...T......................... GACCCGCATGCACACGCACTGGAACGACACCG 21302 28 96.6 32 ..............-.............. TGAGCGATGCGGGCCCGGGCGCCCTCAAGGAG 21242 29 96.6 43 ...........G................. ACCAGGGCGTGGGCGGGGCTGCGGAAGTCACCGTCATCGGGGG 21170 29 89.7 68 ...........G.AG.............. AGCACGTTGACGGTGCGGCTGGCGGAGGCCCTTTAGCAAAGCCGCTGCTGCGCCGCAGGTCAGAAAGC 21073 29 89.7 32 C............AT.............. CCCCCTCTCCCCTTGGCAGGCCTGGCCGTTGG 21012 29 89.7 32 C............AT.............. GCTGACGAGGGAGCAACCCCCGCGAGCGCGGG 20951 29 89.7 32 C............AT.............. CGAAGGAGGCAGCGGAGGCGCAGGCGGCGTTC 20890 29 89.7 32 C............AT.............. CAATTCGGTGTAGGTGCACCACCGGGACGCCA 20829 29 89.7 32 C.............T..A........... GAGACGAACCCGAACTCGGGGCTCCTCGTGGC 20768 29 89.7 32 ...T...T..............A...... ACGTGCAGCGGCTCGCGCGGCTCGGTGGGCTG 20707 28 96.6 32 .....................-....... GTCGCGGACCGCGTCGGCAGCTCCTACCGCGT 20647 29 96.6 50 ............A................ ACGGCGTACGGGTCGTAATCCGCTGAACCCAGCCCTCCCACTGAATCCCA 20568 29 93.1 32 .C....G...................... GAGGAGGCGCTCAAGTTCGCCAGCATCGGTAT 20507 28 96.6 32 .....................-....... GCCGTGGGGGCGGGCGTGATCATCGCTTGCCG 20447 29 96.6 32 .................A........... ATGAGCACGTTCTCCGGCATGGTCCGCAACAT 20386 29 96.6 32 ...........G................. CGGCCCACTGGCGAACGCGGGCGTTCTGCCGC 20325 29 89.7 32 C............G...C........... CACGTCGACGGTGACGGGGGCACAGCGGCCGA 20264 29 93.1 32 C............T............... CCGGCATCCCAGCTGGGTCTGACACAGCGGAG 20203 29 86.2 0 A.......G....T..T............ | ========== ====== ====== ====== ============================= ===================================================================================================================================== ================== 43 29 91.1 36 GTCCTCCCCGCACCCGCGGGGGTCAGCCG # Left flank : CACGAGAACGTGGCGGCGAAGATCCGCCGCCAGCTCGACCGCCGCGTCGATGAGCTCGGCTGTATCAGCGGGTCCGGGAACCTCGACCTGCCCGGCTCCCCCAACTGGTACATGCCTGACCTCGCGGTCATCCCCGAAGACCTGGCCAAAGGCGCGGGCGCTCTCACCCCCGACCAGACCCTCCTGGTCGTCGAGGTCACCTCCGAGTCCAATGGCGACACCGACCGTGTCACCAAGCGCAAGCGCTACGCCCAGTACGGTGCCCCGCTCTACCTGCTCGCCGACCGGCAGAACCGCACCTGCACCCTGTTCTCCGAGCCTCACGACCTCGGCTACGCCGTCATCGACGGCCCCCACCCGTTCGGGACCGCGCTCCGGCTGCCCGAGCCGTTCAATCTGACCCTGGACACCACCGCGTTCTGACCACACGAGGCCAGCCGACACCCAACCGGCCAGTAAAGAAAACAGCAAAGCCGCTGCTGCGCCGCAGGCCAGAAAGC # Right flank : CACTCGCATCGTGTCACCGAGCCGGGCCTCCGGGCGGCGTAAATACCCAGATCGCCCGGTGACGGCACGCCCGAGTCTATGTTTACCGGCGCCGACGCTCGGACGATGGTCAGCCGCGCTGGCGAAGGTGGAAGGCGACATCGGAGGGTGTCTGGCCGGCCAGGAGCACGAGAGGCTCCAGCAGCCCCTCCCAGAGCGCGTCGGTGCCCTCGGGCTGCGCCTCGGTCAGCCGGCTAACGGCCGCCTGCTCCCGGGTCAGCGGTGAGGGCAACATCGGATCGTCGAGGCATTCGTAGATGACCTCCACCCTTGCCAGCAGCTGCTCGCGGCGTTCCTGGGCGGATTCGACGGACTGGGCGTCGCGTGCAGTCAGCAGGGCCGGAACCGGAACGGACAGTGCGGCGTGCAGCTGTCCGAGCGTCGGCTCCTCGGCCAGCTCCGCCACCACCTGGTCGGTCAGCGGAACCTTGCCGTCGACCACTCGTTCCAGGACGGCGATG # Questionable array : NO Score: 4.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:0, 6:0.25, 7:-0.32, 8:1, 9:0.18, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCACCCGCGGGGGTCAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCGCCCGCGGGGGTCAGCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [18-36] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 26199-23637 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBHA01000124.1 Kitasatospora aureofaciens strain NRRL 2209 B2209_contig_124, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 26198 29 100.0 32 ............................. GTCAGTTCACTGGTCGCACCCTTGATCAACTG 26137 29 100.0 32 ............................. CTTGCCGCCGTGGTGCTGTGCTTGGCCGCCCG 26076 29 100.0 32 ............................. GAGAAGCCTGATCTCCCGGGTGCTGAGGCGTT 26015 29 100.0 32 ............................. ACAGCAAGGGCCTAGAGAGGCATCCATGTACG 25954 29 100.0 32 ............................. ACGACGGCCGCAGCAGCAGCGCCGATCCAGTC 25893 29 100.0 32 ............................. AGACGGCTAAGGCCTGCCCCGAGCGCGACGCG 25832 29 100.0 32 ............................. CCCACGCCCGTCAACCTCGGCAAGCCCCGCCA 25771 29 100.0 32 ............................. GTTGTGATCCCCTTGCGGGCGTTGACGACCTG 25710 29 100.0 32 ............................. CAAAAAGCGCGCGCTCCCATCCCTGCTACGGG 25649 29 100.0 32 ............................. ACGTGCGAGGCGGGCCCGTGGACAACTGCGGA 25588 29 100.0 32 ............................. GCCTCGCCGGCATCGACGTCCTGGTCGTCGAC 25527 29 100.0 32 ............................. GTGATGTTCACGGGCGGGTGCCTTTCGGATCG 25466 29 100.0 32 ............................. CTCGTCTACGCCACCCGCCACTTCCACAACCG 25405 29 100.0 32 ............................. TTGCAGAGCTGAATTCCCCGGTGGTTTCGCAC 25344 29 100.0 32 ............................. ACGGACACGTACTCGTGGTTGTCCTCGGTGTA 25283 29 100.0 32 ............................. TCGCAACCCGGTGCACCATGCACCCACTTTTC 25222 29 100.0 32 ............................. GCGCCCAGGCGCCGTTCTGACGGATGTTTGGC 25161 29 100.0 32 ............................. CCGTACGAGCAGCGCCGAAGCCTGGCCACCGC 25100 29 100.0 32 ............................. GTGCTGTGACCAGGCGGCGAGTAGGTGGTCAT 25039 29 100.0 32 ............................. GCCGCGACGACGAACGTCATCTGCCTCGCCCC 24978 29 100.0 32 ............................. GACGGCCGGGCCCTGTACGCGGTGCCCGGGGT 24917 29 100.0 32 ............................. GCTGACGAGGTTCGGCTACGCGAAGGTCCGGG 24856 29 100.0 32 ............................. CTGCCGCGCTCGCCGCCGTCCGCGCCGCCGAG 24795 29 100.0 32 ............................. TTGACGACGTGCTCGTGGCGACCGTTGCCGTC 24734 29 100.0 32 ............................. GCGTGGTCACCGGGGACGCCGGGGGCCTGCTC 24673 29 100.0 32 ............................. GACCTCGGCCGCACCACCGCCTCGTTGGAGGG 24612 29 100.0 32 ............................. CAGCAGCAGGCCGCAGCTGCGGCCGCGGCACA 24551 29 100.0 32 ............................. CTCGGAGGCGAGATGAAACGCGACGGGGCCCC 24490 29 96.6 36 ......................G...... TCCGCCAGCCGTTCGTCCAGGCCTGCGTCCTTCAGC 24425 29 96.6 30 .....................A....... CTCTTCGGCGCGTCCCAGCGCACCGTCCTC G [24398] 24365 29 96.6 32 ..................C.......... AAGTGTCACCCCCGGGCCGTCACCCCCGGCCG 24304 29 100.0 32 ............................. TCGGACACCCACACCTCGGGGTTCTCGCCGTC 24243 29 100.0 32 ............................. TCGGACACCCACACCTCGGGGTTCTCGCCGTC 24182 29 100.0 32 ............................. CCGGACACCCACACCTCGGGGTTCTCGCCGTC 24121 29 96.6 32 .................A........... CCGGACACCCACACCTCGGGGTTCTCGCCGTC 24060 29 100.0 32 ............................. GTCAGCCCCGAGGAGTGGGACGTGGCCCGGCG 23999 29 100.0 32 ............................. TGGAGTGCGCCGACCGCAGCGAGGCCTCGCGC 23938 29 86.2 32 ............CC..........C..T. CGGCCGACGACGGCGGCAGCGTTGCCGAAGAA 23877 29 86.2 32 ......T....GCC............... AGTTCATACAGCACTCAGGGAGGGAACTGCAT 23816 29 89.7 16 ...........GCC............... CCACCCGGCGCTGGTC Deletion [23772] 23771 27 89.7 20 C...................--....... ATGGAGGCCGGATCGGAGAG Deletion [23725] 23724 29 93.1 29 ............CC............... GGCATGACCGCTCGGCATCACGCCCGCCC 23666 29 72.4 0 C..T...T.A.....A.....A...T..C | T [23639] ========== ====== ====== ====== ============================= ==================================== ================== 43 29 97.8 31 GTCCTCCCCGCAGGCGCGGGGGTCAGCCG # Left flank : TGCGGGGGTCAGCCGACGACCACCGCCTTCAACACTGGCGGCGCGCTGTCCTCCCCGCGCAGGCGGGGGTCAGCCCCGGCCGTGGGCGTCGTGACGCGGGAGCGCGCCGTCCTTCCCGCGCGGGCGGGGGTCAGCCGTCCCCGAACTACGTGCAGGGCGCCGTGGGCTGGTCCTCCCCGCGCAGGCGGGGGGTCAGCCGAGCTGCCCGGACTGGGAGTTGGTGCAGATGTAGTCCTCCCCGCGCCCGCGGGGGCAGCCGAGGCCGGCACTCTCCAGGTGCCCGAGGTGGGTGTCCTCCCCGCGCCACTGCGGTTGTGTCCAGGGCCTCGCTGGCGGGGCGAGTCCTCCGCGCAGCCGGACGACGTCGCCTTTGGCGTGGCACGATGAGACACGGTTCCTTGACAGCACAACAGCACAACAGCACACCCGCCGTCACGGCCCGCCGTGTGCAGCCAAGTCAAGAAACGGCAAAGGCCCCGCTGCGCCGCAGGTCGGAAAGT # Right flank : CGCCAGACTCCCGAACAGCTACGGTAGGAGCCGTGGGTGTCCGGTCGAACACACCACAGCCAGGCCGGAGGAGGCGAACCGTTGAGCGCGCAGCCGATCGCGTACGCGGACGTGAATCACGAGGCCGCGTTGAAATACGCCGTGCAGCTCATCGATCACCGGTGGGCCCAGGTCATCGAGGGGCGGATCGTCCTGGTGTCACCCACGTGGGACCACGAGAACGTGGCGGCGAAGATCCGCCGCCAGCTCGACCGCCGCGTCGATGAGCTCGGCTGTATCAGCGGGTCCGGGAACCTCGACCTGCCCGGCTCCCCCAACTGGTACATGCCTGACCTCGCGGTCATCCCCGAAGACCTGGCCAAAGGCGCGGGCGCTCTCACCCCCGACCAGACCCTCCTGGTCGTCGAGGTCACCTCCGAGTCCAATGGCGACACCGACCGTGTCACCAAGCGCAAGCGCTACGCCCAGTACGGTGCCCCGCTCTACCTGCTCGCCGACCG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCAGGCGCGGGGGTCAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCAGGCGCGGGGGTCAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [28-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 29619-27792 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBHA01000124.1 Kitasatospora aureofaciens strain NRRL 2209 B2209_contig_124, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================================================================================================================================================== ================== 29618 29 69.0 198 .GG.A.T..T...AG.T.....C...... CACTGGCGCCGAGGAGACTGCGCTGCCTCCTCCCCGCAGGTGCAGGGCCATCTGCAGTTTGGACCGTCCGACGAGGCCTGCGCCGTGACACGATGAAGACCGCACCTTGACACCACAACAATGAACTGCCAATCACATCCCATCTTGCAGCACAGTCAAGAAGTCGCAAAGACCCTCCTGTGTCGCAGGTCAGGAAGT 29391 29 100.0 32 ............................. ACCATGACCCGACTGACCGAGTACCGCGAGGA 29330 29 100.0 32 ............................. GGCACCGCCACCCCGGCGCCGGCGGTGGCTGC 29269 29 100.0 32 ............................. CCCAGTTGTTCTCCGACAGCGACTTCAAGCAG 29208 29 100.0 32 ............................. GCCCGGACCGGGATGGTCCGGGCCTCTGTCGT 29147 29 100.0 32 ............................. CCGTCGCACGTTCCCGCGTGGGCGTTCAACAA 29086 29 100.0 32 ............................. CCGTTCCCGATCGCCGAGGCCGAGACCGCCGA 29025 29 100.0 32 ............................. GCGGGCTGCGGCTCTGCCGGCTGGCGGGCGCT 28964 29 96.6 32 ......T...................... GTCCGGGCCGCCACGGTTGGGGCGTTGTCGGC 28903 29 100.0 32 ............................. CGAAGGGGTACCTACGGTGGTAGCTGCGGGTG 28842 29 96.6 32 .....A....................... CAGCCGTGACCACCATCCCGCCGCCGCCCACC 28781 29 100.0 32 ............................. TGGGGCAAGGGCCCGCTCACCGCGTCCCAGGT 28720 29 100.0 32 ............................. ATCGGCGACCAGATCAAGGCCACCCGGGCCCG 28659 29 100.0 32 ............................. CAGCGGTGTGGGGGGCGGGGCGGCCGGTCAGC 28598 29 100.0 32 ............................. CTCTCGACCCTCCTCCCCAGCCGCTACAACAT 28537 29 89.7 32 C..........A..T.............. GTCCGCCAGGTCCGCACCCGCTCGGCCGCCGC 28476 29 89.7 32 C..........A..T.............. CTCGCCCAGACGGTCGCTCCGGCTGTCGAAAA 28415 29 82.8 32 C.G..........AGT............. TAGCCCGCCGCCGCGGTCAAGGCGCCGCTCGC T [28406] 28353 29 93.1 32 .............AG.............. AGCGGGCAGACTGGCCCGTACCGGCCCAAGAG 28292 29 93.1 64 .................A.........T. TCGGCAACGGGTGAAACGAGGGCCACGGACGGCGGATCAAAAGCGGGTCACTGCGAGTGAAACA 28199 29 89.7 32 C..........A..T.............. ACGCTCAGCGCGGTGCTCCGCATGGCCCAGCA 28138 29 89.7 49 C..........A..T.............. TTCGAGGTCCACGCAGAAGGGCGCAGTGGGTAGTCCTCCCCGGGGCAGC 28060 29 93.1 32 .................A.A......... GGCATCGACGACCACAGCCAGGTCGTCATCAA 27999 29 93.1 30 ...........A.T............... ACGGTTGACGACGCGCCGCGCCGCCAAAGA 27940 29 93.1 32 .............GA.............. CGGAAACGGCGGAGGAGCTTCGCCGAGCCGAA 27879 28 89.7 32 .............AG.......-...... ACGTGGTGGTACTGCACCGGCTGTCGTCACGG 27819 28 93.1 0 .........-...A............... | ========== ====== ====== ====== ============================= ====================================================================================================================================================================================================== ================== 27 29 94.5 40 GTCCTCCCCGCGCCCGCGGGGGTCAGCCG # Left flank : GTAGAGCTTCGTCGTCAGCTGGGTGCCGCAGCCGCCGAGCAGCAGCCCGCACCAGAAGGTGTCCGCGGCGTGCTGCCGGCGGAAGGCGTCCAGTTCGATTGCTTCAAGGGGCAGGAGCAGTGGCTCGTCCGACTCCGCGCTGCCCAGCACCGCCGTCTGGATCCGCCGCTTGTCACCCGGCAACGACAACCCCCCAACAGGCGCCTGACCATGGACATCTCATCGTGCCACCGACCGGGCTCCCGGGCGGGGTAAATGCCCAGATCGTCCGGCTGACGGCACGCAGGAGTCTCTGGCCGACGCCGACGCTCGGACGATGGTCAACCGCGCCGGCGAAAGTACAAGGCGACGTCGGTGGGTGTCTGGCCGGCCAGGAGCACGAGAGGCTCCAGCAGCCCCTCCCTGAGCGCGTCGGTGCCCTCCGGCTGCGCCTCGGTCAACCGGCACGCGCAGGTCGTGCTGGAAGCTTATGGGCCGAGAGCAAGGGGGTCCGCTCGCTA # Right flank : GGGGACGCGAATGTGTATCACCGTCCGCGGTTCGGCTCTTTTGCCCGTACCTGCCCGGGGGCGTCAGTGCCCCGAACTGCCTGTGTGGGAGAGTACGACGCGATCATGAATCCTGGGGGTGGATCAGTGCGCACACGTCATCGCGCGGTGGTTGGGGTCGTTCTGGCGGTTCTCGGAGTGTCAGCCTGCTCCGCCGACCCGCAGGGCAGACCGGCGACCGGCGCGGCCTCCGACCGGACGCATCCTCAGGCTCGACTACGCGAAGGCCTGCTGACCCTGGACCGGCTCCCCCAGGGGTTCCAGTTGAACACGGCGGACGTCAACTCGACGACGACCGGTGCTCCGCATACCCCGTCCGCAGTTTCCATCGCGTCGATGCCGTGCTCCGAACTCGGTGTCGAGTCCTTCATGACGGCTCACGCTCACCCCGTGGAGGACGCGGCGGTGGGGGTTGAACGGACGCCGGTCGGCGACGACGATATGGGTTGGTTCGGCCAGGA # Questionable array : NO Score: 4.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.66, 8:1, 9:0.66, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCCCGCGGGGGTCAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCGCCCGCGGGGGTCAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 34687-32242 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBHA01000124.1 Kitasatospora aureofaciens strain NRRL 2209 B2209_contig_124, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 34686 29 89.7 32 ......G......AC.............. CACGATGGTCTGCCGGGTGCGTATCCGGTGAT 34625 29 93.1 32 .............AG.............. GGACAGCCATGTCCGACGCCACCCGCGTCCTC 34564 28 89.7 32 ........-....AG.............. TTCTGGAAGCAGGGCCCCACGGTCGCCAACCC 34504 29 93.1 32 .............AG.............. CACTCGATCTGGATCGGGCGCGCCGGGGAGGG 34443 29 93.1 32 .............AG.............. ATGTCGCCCATCTACAGCCTGACCACGGGTAC 34382 29 100.0 32 ............................. CACTAACTCGCTACCGGCATCTACCGCCGCCG 34321 28 96.6 32 ......................-...... CAGGAGAACCAGTGAGCAACCCCGTCGAGCAG 34261 29 100.0 32 ............................. GTGAGACCGGACAGCGCGTCCGGCACCTCGGA 34200 29 100.0 32 ............................. TACCCGGGTCATGCTGAATCTGGCCGACCCGG 34139 29 100.0 32 ............................. ATGTCCATGGTTCCCCCCTACGGTGCGATCTT 34078 29 100.0 32 ............................. GCGCACAGACGGACCGCACCTGGACCTGCCAG 34017 29 100.0 32 ............................. AACACGCTGGGCGGCGGGTGTGCCGTAGTAGG 33956 29 100.0 32 ............................. AACACGCTGGGCGGCGGGTGTGCCGTAGTAGG 33895 29 100.0 32 ............................. GCGTCCAGACCGGCGGTCAGGTCCATGTCGAG 33834 29 100.0 32 ............................. CCGAGCGGCTGCGCGAGCAGGCCGAGAACGAC 33773 29 93.1 32 .G.....................T..... CCAGCCGCCAGGGGCGGTCAGGGTGCGGACCC 33712 29 89.7 32 ..T..T..T.................... GGCCAGGACACCGGCACCGGCGGCATCATCAG 33651 29 100.0 32 ............................. CCTGGCAGCCTGCGGGCCAACTCGGACATCCT 33590 29 96.6 32 ..................A.......... GTCCGCGTCCCACGCGGCGTCGACCCGACGAC 33529 29 96.6 32 ..........T.................. TCGTCGCACTCGACCGGGTCAGGGCGCTTCGG 33468 29 100.0 32 ............................. GCCACCCAGTTCGGGTTGTAGTCCTCCCACTT 33407 29 100.0 32 ............................. GCGACGACGGTCACGGTCAGCACCGCGCTCAG 33346 28 96.6 32 .....................-....... TCCGTGGCGGCCGCCCCGCCGGCCGCCGGGCC 33286 29 100.0 32 ............................. GTGATGTACTCCCGCATCGACTCCGGGTCGCA 33225 29 96.6 32 ...................A......... ATCGTGTTCACGGTGATCGACTTCCCGGAGCG 33164 29 93.1 32 .............GG.............. ACGGGGGCGGCGCTGCACGCGGCGTCGGTGAT 33103 29 89.7 14 ......T......AG.............. ATCTGGTCCCTTTC Deletion [33061] 33060 29 93.1 32 ...........A..C.............. GCCGCCAGCACGGTGCTCGCCGAGGTGCTGGA C [33045] 32998 28 86.2 32 .C.........A..C......-....... TCGGGGCTCCGCTGCAGCGTCCGACACGGCCA 32938 29 86.2 31 ...T.......A..C.T............ GAGACCGTCGCGGGCACGTACGTCGCGCCCA 32878 29 93.1 32 ..T........................T. GCCCCGACGACGCAGAATCGGGAAACCACAAA 32817 29 100.0 32 ............................. GTGTCCATTGCGGTGTCGTCCACCGCCACGAA 32756 29 86.2 32 ..A..........AG.......C...... TTCAGTGCCAGTTGTTCGCCAGCACTGCGGCC 32695 29 89.7 32 ..........T..AG.............. GTCCGCCAGCTGCGGCAGCTCCGCCGGATCGG 32634 29 93.1 31 .............GG.............. ACGGGGCGGCGCTGCACGCGGCGTCGGTGAT 32574 29 93.1 32 ......T.......C.............. AACACCCACACGCCGGGCTGCTCGGGGTCGGT 32513 29 89.7 32 .............AG.............C AGCGAGGGTTCCTTACCAGGGAAACCGGAACT 32452 29 89.7 31 ........T....AG.............. CTTGTATTCGGGCATCCGAACCTCTCGTTTG 32392 29 89.7 33 ........T....AG.............. GCGAGCGCGGGGGCGCTGGCGATCCAGATCCGG 32330 28 86.2 32 ...........A..C......-....G.. CCCTTCCGGCTCCGGTGAGGTGCGAACTCACC 32270 29 93.1 0 ...........A..C.............. | ========== ====== ====== ====== ============================= ================================= ================== 41 29 94.5 32 GTCCTCCCCGCGCCTGCGGGGGTCAGCCG # Left flank : GGGATACGGACCGGGCAAGCCCGCGCTCTTGCCCCACAGACGCCGATCTGGACGCTCAGGTCCGGAGACACCGACGAGGTAGCTGTCAGTCATGGCCGAACACCTATCAGCCACCACTGACACCGATGCTGACACTCAGGTCCCGGAGGTCGTGGCTCAGCCACGGACTGACGCCCTGCTGCGCTGTCTTCGGGTAGTTCTGTCCGGCTGCCGGGAGCTGCAGGAACCGCGGGAGACAGCGTGGTCCTCCCCGCGAGCACAGGGTCAGCCTCACGGGACAAGACACCTCCCCAGTCAGGCGGGCTCACGCACACGTTCGACCGCGCCGACAAGTTGCGCACGTACTCCCGCCCAAACCGAGCACACACCCAACGTGGAGCCTGCGCCATGACACGATGAAGTTCGCTCCTTGACACCACAACAGCGCATCCACCATCACATCCCGCCCTACAACACAGTCAATAAACAGCAAAGGCCCTGCTACGCCGCAGGTCAGAAAG # Right flank : GGGCCCGGGCGCCATTCTGACGGGCATTCCCGTCTTCCCCTCACTCGCCCGTCGCCGCCCTGCTCGTCCTCGCGTCGCAGCCCCTTCCGACAAGGGGCGCGATCGCACTCGCGCGCGCGACCAGCTCACTAGGACGACCTGCACGCCGGTCGACCGGTTGCGGCCCGGCGCGCGCCAGACGGATGGGAACGGCTTCCCCAGGTCACCCAGCACCTTCACCAGCAGGGCTGGCATCCAGTCACGCCGTGCAGGGAGTCCAGCTCGCTCAGCCGGAGCGTTGGAGAGGATGGCGTTAAGCGGAGCCAGCGGGCCGGTCAGCGGTAACGGAAGAGCTGGTGCAGGCGCAGGACCTCGGACTGCCAGTGCGCGCGGGCCTCGCGGGTGTCGGCAGGAATCGTCCGGCCCAGGCGACGGGCCAGGCCCTGGTAGAGGGCGGGCGGGCTGCTGCCGTCCGCGGCAAGCAGCGAGGACAGCAGCGGTTCCTCGGCCGCCGTGCCCGC # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.46, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCCTGCGGGGGTCAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCGCCCGCGGGGGTCAGCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [33-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 44572-45210 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBHA01000124.1 Kitasatospora aureofaciens strain NRRL 2209 B2209_contig_124, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 44572 29 100.0 32 ............................. TGCGCCCCCTCCGTTACCGCAGTCGCGAGCTG 44633 29 100.0 32 ............................. TTGCTCAACGTCTACGCCGCCCACGGCTGGAC 44694 29 100.0 32 ............................. ACGGGGCGTACGTCGCGGACGTGATCGACCTC 44755 29 100.0 32 ............................. GTTCCGGCCGCGTTCGCCAGGTCTTCCCGGGT 44816 29 100.0 32 ............................. GGCGTCCTCAACGTCTCCGGCATCACCAGCGT 44877 29 100.0 32 ............................. CCGAGACCGGCCGCGGCGGGCAGGCCGTGCTG 44938 29 100.0 32 ............................. TCAACGCCCACGGCGTGCGAGGCGGGGGAGTC 44999 29 100.0 32 ............................. ATCCTCGGCGGCGGCCGCACCGAGTACCTCGT 45060 29 100.0 32 ............................. TACTCTGGCGGTGTCTAGGCGCTAGGTGCTTG 45121 29 100.0 32 ............................. TCCACGCCTACGGCATGTGAGGCGGGGGAGTC 45182 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 11 29 100.0 32 GTCCTCCCCGCGCGAGCGGGGGTCAGCCG # Left flank : CCAGCGCTTGCTCGCACCAGAACAGCAGATGGCCACGCCTGACCCCGAGGAACAGCTCGTGGACCTCTGGGATCCCGTCTCAGGAGTGCTGCCGGGCGGCGTGAACTACTCGACGGAGCAGACCCTTTGACCGCCTCCCTGCAGTCCGCTGGACAGTCATGGCAACAATGACCGTCCTGTCCGCAACCGCTGTCCCTGATCACGTTCGAGGAGCCCTGACCCGCTGGCTCCTCGAGGTCACCCCTCAGCTGTACGTCGGCACCATCTCCGCGAAGGTCCGCGACGAACTCTGGCACGCCGTTAGTGAATGCATCGGTAGCGGAGTGGCTGTACTGGTCCACCCGGCATCCAACGAGCAAGGCTTCGTGCTTCGCACAGCGGGTGAGCAGCGACGAAAGCCCGTCGACTTCGACGGGCTCACACTGGTGGCGATGACCCGCCGGCATCACCACCAAGGTCAAGAAATCGCAAACCCCTAGAAACATTGCAGGTCGGAAAGG # Right flank : GACGAGACCGTCGCCGCCGCGATGATCGACCGACTCGTCCACCACGCCGAGGTCCACTCCCTCAAGGGCGAGTCCTACCGCATGCGAGGACGCGAACTCGGACGCGTCCCCACCGACGACAACGACTGACGCACACCATCCAACGAGACCAACGGATGGCCCACAACTGAACCGCTGGAACCGGCCCGTTTTGAGCCGTTGCCGACAGTCAGCCAGCTGCGCCGCCCCAGGCGCACCGGCTGGCGCCGTCCTCCCCGCGCGAGCGGGGGTCAGCCGACCTGGCGGCCGTTGGCGCGGGCCTCGTCGTAGTCCTCCCCGCGCGAGCGGGGGTCAGCCGGAACGGGCGCGGGCGATCTGACGCTCGGTCGGGTCCTCCCCGCGCGAGCGGGGGTCAGCCGTCACGGTCAGGGAAGGACGGAGGGACGGAAGAGTCCTCCCCGCGCGAGCGGGGGTCAGCCGGTCGGGTTGAAGGCGAGGACCAGGCCGTCGGCGTCCTCCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCGAGCGGGGGTCAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCGCGAGCGGGGGTCTACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 45457-48351 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBHA01000124.1 Kitasatospora aureofaciens strain NRRL 2209 B2209_contig_124, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 45457 29 100.0 32 ............................. ACCTGGCGGCCGTTGGCGCGGGCCTCGTCGTA 45518 29 100.0 32 ............................. GAACGGGCGCGGGCGATCTGACGCTCGGTCGG 45579 29 100.0 32 ............................. TCACGGTCAGGGAAGGACGGAGGGACGGAAGA 45640 29 100.0 32 ............................. GTCGGGTTGAAGGCGAGGACCAGGCCGTCGGC 45701 29 96.6 34 ............................A GACCACCCGGAAGGCGCCTCATGAAACCACTCAC 45764 29 100.0 32 ............................. AGGACGCCCGCGAGGAAGAGGCCAAGGCCCGC 45825 29 100.0 32 ............................. CAGCTGCAGGCCCAGATGGCTGCTGCGGCGCG 45886 29 100.0 32 ............................. GGCGAGGGCTTGCCGTCACCGACGTCGTCGCG 45947 29 100.0 32 ............................. TGGCAGGAACGTGCGTCGTTCGCACTCGGAAT 46008 29 100.0 32 ............................. GACGGCGTCCCGAAGTGGGAGGTGCAGGTCGT 46069 29 100.0 32 ............................. ACCGCCACCGACCTCGCCATCGAGGCGGAAAA 46130 29 100.0 32 ............................. TTGGCCCACCCGCTCGCGAAGTTCACGTTCTG 46191 29 100.0 32 ............................. CCCCTGCGTCTCAAGATCCACGACCGGCCCTG 46252 29 100.0 32 ............................. GCGCGCGCACGGCGCGCGCGCGTGAGGGCTGC 46313 29 100.0 32 ............................. AAGCGCATCAGGGACATCATCGGCACCGACCG 46374 29 100.0 32 ............................. GCGGCCCGGGCCGCCGCGCGCGTGCCGGTGGC 46435 29 100.0 32 ............................. TCCCTAGTCCCCCGTCGACACGAGGAGGGCGC 46496 29 100.0 32 ............................. GCCCACGCCGAGAAGAACGCCGACCAGCTCGA 46557 29 100.0 32 ............................. CAGAGCCCGGGTCCACTCCGCCGGATCCTTCG 46618 29 100.0 32 ............................. GTGATAACACCACTAGTGCTGGGCATAAAGAG 46679 29 100.0 32 ............................. TCTCGAACTTCACGAACTGGGTGGACAAGAAG 46740 29 100.0 32 ............................. CCCGGTACAGCGCAGCAGATTGCCGGCGGCGC 46801 29 100.0 32 ............................. CGGCTTTACGCCACCTTCCCGCTCTCCAAATC 46862 29 100.0 32 ............................. TCGGCTTTGGCGGGCGACTCCACCGACGCCCG 46923 29 100.0 32 ............................. GTAGGCCATAAATGACTCATGCGCTACCCCCT 46984 29 100.0 32 ............................. GCGACGGCAGCGCCCTGACCGAGCAGGAACTT 47045 29 100.0 32 ............................. AACGCGTTCGCCGGTGACTCCTCGGATGCCCG 47106 29 100.0 32 ............................. TCGGCGGAGGCGGTGCCCATGAGGACGGTGCC 47167 29 100.0 32 ............................. TGGGCCACCAGCGTCCAGACCCGAGACCGCGC 47228 29 100.0 32 ............................. CGATCTTGCGGAGGTGACATATGGCCATGTCG 47289 29 100.0 32 ............................. TCGCAATCCGGTGCACCATGCACCCACTTTTC 47350 29 100.0 31 ............................. CCCGGCGCCTTGGGGGACGGGTCGCGAGGAT 47410 29 100.0 32 ............................. GTGGAGTAGACGACGCCCTCGTCTTCCCAGCG 47471 29 100.0 32 ............................. CCCCCCGGACTGATCCCCAGGAGTTCCCGCTC 47532 29 100.0 32 ............................. GCTGGGACACCTGCCCGCGCCTGCACGTGTTC 47593 29 100.0 32 ............................. GCCGCGTGGGCGGCCTCCGGGTCCGAGGGGGC 47654 29 96.6 32 ................T............ GATCAGCATGGACCGCGAGTTGAACATCATCT 47715 29 100.0 32 ............................. CTGATGACGTCGAGCAGGAGTTCGCGAATGGG 47776 29 100.0 32 ............................. CCGGAGAGCCTGGCCCGGGAGATGCGCAAGCA 47837 29 100.0 32 ............................. CCAGATATCCGAATCCGAGGCACGTCCCGGTG 47898 29 100.0 32 ............................. CCGAGCAGGAGGCCGGTGTCGCCGGAGGCCGG 47959 29 100.0 32 ............................. GCCTGACGTGCTGCGGCCCCGCCCTTAAAGAA 48020 29 100.0 32 ............................. TTCGACGAGTACACCCCCGACGCCTGGCACGA 48081 29 100.0 32 ............................. CCTTCCCCGCTCAGCAGCATCTGCACCACGCG 48142 29 100.0 32 ............................. ATCATCGGGTCGCTGGTCGACGCCATCAAGTC 48203 29 100.0 32 ............................. GCCAGGGTCAATAGTTCGTTGACCGCCGCCAG 48264 29 96.6 32 .................T........... CTCCGAGTCCGCGCAGAAAACGCGCGGAGGGA 48325 27 82.8 0 ...............--.....C.T...T | ========== ====== ====== ====== ============================= ================================== ================== 48 29 99.4 32 GTCCTCCCCGCGCGAGCGGGGGTCAGCCG # Left flank : GGGTCAGCCGTCAACGCCCACGGCGTGCGAGGCGGGGGAGTCGTCCTCCCCGCGCGAGCGGGGGTCAGCCGATCCTCGGCGGCGGCCGCACCGAGTACCTCGTGTCCTCCCCGCGCGAGCGGGGGTCAGCCGTACTCTGGCGGTGTCTAGGCGCTAGGTGCTTGGTCCTCCCCGCGCGAGCGGGGGTCAGCCGTCCACGCCTACGGCATGTGAGGCGGGGGAGTCGTCCTCCCCGCGCGAGCGGGGGTCAGCCGACGAGACCGTCGCCGCCGCGATGATCGACCGACTCGTCCACCACGCCGAGGTCCACTCCCTCAAGGGCGAGTCCTACCGCATGCGAGGACGCGAACTCGGACGCGTCCCCACCGACGACAACGACTGACGCACACCATCCAACGAGACCAACGGATGGCCCACAACTGAACCGCTGGAACCGGCCCGTTTTGAGCCGTTGCCGACAGTCAGCCAGCTGCGCCGCCCCAGGCGCACCGGCTGGCGCC # Right flank : TGCTCCACAAGGCCAGGATGCGGGTGCGCGACGACCTGACCACGATGCTCTGCAAGCGGGTGGCCAGCAAGGTGCGCCGGGCCCGCGACGAGCTGGAGGAGATCCGCCGCCAACAGCAGGGAATCGTCGAGGTGCTGGTCGGCAACTACCGCACCCTGCTGCGGCAGGTGGACACCGACGGGCCCGCGCAGACGGCGAGGGCGAAGGCTGGCGCGCTGACGAAGGAGACCCTGGACGCCCTGGAGGGGCTGGACGAGGAAGCGCTGCCCGGCGAGGTGTCGCGCCGGCTGAACCGGAAGGTGTCGGCGGCGTTCCTGAAGCTCTCCGAGGGCCTGATGATGCAGTCCAACGGCGCCGGTCGAGCAGGGCGCCGACTTCCGCCAGCCGCCCGGCGGGACCGTTGCCGTCCCCGTCCCGGCCCGCCGCCGCCTCTCGCCCGGTGGCCTGACCTTCTCCGACCCGGACCGCCAGATCTGACCGGTGCGGCCCGGCCCGCCGGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCGAGCGGGGGTCAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCGCGAGCGGGGGTCTACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //