Array 1 45374-43690 **** Predicted by CRISPRDetect 2.4 *** >NZ_CGCE01000002.1 Streptococcus agalactiae strain CZ-NI-007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45373 36 100.0 30 .................................... ACACATATTGAATAGCCTTGATTTGCTCTT 45307 36 100.0 30 .................................... CACCAGTAACTCCAGAACTCATTCCATTCG 45241 36 100.0 30 .................................... GTTATCTTCTTCATTTTCAAATGGCTTGTT 45175 36 100.0 30 .................................... GTTCCTAAAAGGTGGCGGACCAGTTGGAGG 45109 36 100.0 30 .................................... GTCAATTCCAACAGGTATTACACAAAATAT 45043 36 100.0 30 .................................... CAATATGGCGATACACAATTACAATTTAGT 44977 36 100.0 30 .................................... TATTGGAAAACAATATTTGAAAGAAGAACG 44911 36 100.0 30 .................................... ACATGGCAATCGCAGCACTTCAGAAGCTCA 44845 36 100.0 30 .................................... GATTTTTATATGGAAATTTTTAGATTGAAC 44779 36 100.0 29 .................................... CGTAAGGTTCGTTCAATACTATAAGCCTC 44714 36 100.0 30 .................................... GTACTTTTCGTGTAGGAAGATGTGGCATGT 44648 36 100.0 30 .................................... CCTTAGTATCAAATGCTGGTTGGTTTTGAG 44582 36 100.0 30 .................................... AGATTATCTTGATAATTTGCATTGCTCTTT 44516 36 100.0 30 .................................... TTTTCACCGCTTCAGCAACGTCATAAGGCT 44450 36 100.0 30 .................................... ATTGACAGGTGATACCTTAACAATAAAAAA 44384 36 100.0 30 .................................... TAATAATTTTGTCAAAATATTCCCATCTGA 44318 36 100.0 30 .................................... ATTGACAGGTGATACCTTAACAATAAAAAA 44252 36 100.0 30 .................................... TAATAATTTTGTCAAAATATTCCCATCTGA 44186 36 100.0 30 .................................... AACCATATTACCATTTCCCATTCTTTGCGT 44120 36 100.0 30 .................................... TTTTCTATTTATTTTGTTTTTGACACCTGT 44054 36 100.0 30 .................................... TGGTTAAATAAGCAATCAAAGCAGGCACAC 43988 36 100.0 30 .................................... TATCCTTTTCTGAGGGCGTCGGTATTTGTT 43922 36 100.0 29 .................................... ATGCCAACCCTCAATTTACTTGGTCACAA 43857 36 100.0 30 .................................... TTCTATCTTCTGAAGATATTTCACAAGTGA 43791 36 100.0 30 .................................... ATCTTCTTTTGACCTAACAAAAGGATATGT 43725 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : TCCTCTTTCTATGTTTCAATTGCCAATTTTGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //