Array 1 193626-194387 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFEMK010000020.1 Pediococcus acidilactici strain G11 NODE_2_length_384535_cov_173.784425, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 193626 36 97.2 30 .A.................................. GAATGGATTAGTAAGTTTCAAGAAGCGTTT 193692 36 100.0 30 .................................... TTCTGGTCGAATAATACCCCTAATCTTCTG 193758 36 100.0 30 .................................... ATGAATGGAATCCACATGATTGACCCTTAC 193824 36 100.0 30 .................................... GCATTGGTGAACTGTCGGTTCACAGCCATG 193890 36 100.0 30 .................................... ATGGGGATATTAAAGTTCAACGGATAAATC 193956 36 100.0 30 .................................... ACAGCGATGCTAAATACATCGTGTTGGAGG 194022 36 100.0 30 .................................... AACACATCTCTCAATGTTGGTTGTAAGTCC 194088 36 100.0 30 .................................... GCTCGAGTTATCTTCTTAATACTTACATTC 194154 36 100.0 30 .................................... ATTTGATTCAATCAACAACTGAAACGGCGC 194220 36 100.0 30 .................................... AGCAGATTAATAGTGCCCGGATTAAAGCTA 194286 36 100.0 30 .................................... AGGCTATAAAGTGATTGATCACCGCACCGA 194352 36 72.2 0 ......A.......CC.....CC.....C...TCAA | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 97.5 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAATATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGGTTGGTGGATGAGCAGCGTAACCAAATTCACGATCAGGTCAATCAACTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTTGTGTTAACTAATGTCGCGCATTATTTAACGGCAACCCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGTAATTGATGAAATTTCAGTTAGAAAATAACG # Right flank : AAAATAGATACGATTATTTATTTTAATATTGCAATCCTTAAATTCCCTCCAACAAAACAACAAGCTACTTGATCAAGCGTGACAGCTTTTAAGTAGCTTGTTGTTTTTAGTAATAAAACAGCCCAACCGAATCCCAATCCAGTCAGACCGTCTTAAATTTCCTACATCACTAGCGGCAATACCACCAGGCCGTTCATCAAAATGTGTGCAATCATTGAAGTTTGGATGCGTCCCGTTTTATGGTACAGCCAGCAAAATAGCAGGCCAATCGCGGCGTACAAAAAGATGTGGCTGTCGTTATGCATAAAGGCGAACGCTAAGCTGGAAATGATCGCCATGATCGTCAAGCCTAAGTTCGAGCGCATCCCGAACAGCGTGCTTAAATTGCCAAACAAAACTTTTCGAAAAACTAATTCTTCCATAATGGGCGCCCCAACGGTGATTGCCAACACAAAAAACGGGTTGATTTTCGCTAGGGTAACTAACGTAGCCGTGTTCGC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //