Array 1 166-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMLR01000029.1 Paenibacillus sp. UNCCL52 BR01DRAFT_scaffold00027.27_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 165 32 100.0 33 ................................ ATCTTGTTAATCAGCCAAAACGACAACATTGCG 100 32 100.0 36 ................................ TTGTTTGGTTTTTTGTCCCTGGCATATGCCGGGGAA 32 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 3 32 100.0 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : AATGCAGCCGGTATGATGAACAGGGTTAATAACTCAACTTTTGCCGAACGTCTTCATAAAATATTTTACAAATACCTTTATGATTTTCGAAAACATAAAGGTATTTTTCTGATCAATGTAGTCGATATTTCCGGATGTATTTACCCAAAGCCAGAACGTTCAGCTTTGGTGTTAACTGGTGGGACCCTGCTTTTAAATGAGCTATCGATGAATTAAATATATTCGAATGTGCGCTTACTCCTTCACAGGTGGCAGAACTGGCAGAGGTGAAATAAGTCCAGGCAGGTATTTGTTGCTAAGCCAAAAAGCGAGTCTGTCCAGGTGCGAATGTGAAGCTCACATGAATTCTCCGAGAGATTCGCACCTCAGATTTTGTCGAATTACATCGAATGTGAACAAGTTTTAAACGATCGCAAGAGGATAAGGTAATATTAGATGCGTTTTTGCCAAAATAACGCTAGAATGTTACTTAAATAGGGGGCATTTGACCCATTTTCGCT # Right flank : T # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 4889-4725 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMLR01000029.1 Paenibacillus sp. UNCCL52 BR01DRAFT_scaffold00027.27_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 4888 32 100.0 33 ................................ CTATTTGGCGCTAGATAACGTTAAGAGGTTTAC 4823 32 100.0 35 ................................ GAATTCAATGTGCAGGATAAAACCGATTGGATGAA 4756 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 3 32 100.0 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : CAA # Right flank : AAGATGAATGGAGGACGTCCTCAAGAAAGAAATAGGCGCACTCCATGTGACAATTGACGATGCGGCAGGATTCACGGTCAGTCGTTACGGCATATGGTTTTGTTTGACTGGTATGCTTTTCATAGTTCTCAGGGCTTCAGCCGCAGAAGGAAGAAAATAAAATCGAAGTGAAACGATGCTTGGTGATATGTATAATGCTCGCAATGGGCGCGATGAGAGGCAATGATGCGGGGGAATGAGGCAAGGATATGAGGCCGTACAGGGGATAAAATGCGGAAGAACCACCGAAGGATGAAAAATCCAGTGCGGTGGTTCTTTTTTTTTACTCGTCTTGTATGCCATCATTATAGGGGGAGGGGATGAAGGATGTTCCAGGATTTCAAGCTCGTAAGTGACCGGCCGGTCTCGATACAAGTAAAAGAATACGTCAATCGTTTAATTATAAAAGGGGCGCTTCAGGCGGATCAGAAGCTACCTTCCACACGAGAAATGAGCGTTCT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1311-1147 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMLR01000037.1 Paenibacillus sp. UNCCL52 BR01DRAFT_scaffold00035.35_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1310 32 100.0 33 ................................ TGTTTACTATCATTGAATGGATGTTGACACATG 1245 32 100.0 35 ................................ GATACCATCGGCAGATGATTGAGTGGATATTTTAA 1178 32 84.4 0 ..........................CATG.C | ========== ====== ====== ====== ================================ =================================== ================== 3 32 94.8 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : | # Right flank : GGAGCAGCCGCCACTTGGTCGTACGAGTGGAGAGCGCCTCTTTATCCGAAATCATGAAGGGGTCCGTGAAGTGAGGAGCTGGAGATTTTACGTGGTTTGGAGGGAGACGGCGTTGGTTCAGTACAATTCCGTGTGGGATGATCTGATCTTACAGCAAAAAGATGATTTTTATTTCCATGGACGCCATAAGCGCCCGTCGTTAGATAACGTGAATGCCCTATTATCTTTTGCCTATACACTGTTGTCCAACGATATGAAATCCGCACTGGAAGCTGTCGGTCTGGATGCTTATGTAGGTTTTCTGCATAGAGATCGTCCAGGGCGAGCCTAATTGGCACTGGATGTGATGAAAGAGCTTAGAGGAGTAAATACCGACCGTTTTGTTCTTACATTATTAACAAAAAATGATTCATGGCAAAGGATTTTACAAAAAAGAAAACGAGGCTGTCATGATGGACGATGATACGAGGAAAATCGTATTGAAGGCATGGCAAGAACGG # Questionable array : NO Score: 8.10 # Score Detail : 1:0, 2:3, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 4819-4655 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMLR01000031.1 Paenibacillus sp. UNCCL52 BR01DRAFT_scaffold00029.29_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 4818 32 100.0 33 ................................ CTATTTGGCGCTAGATAACGTTAAGAGGTTTAC 4753 32 100.0 35 ................................ GAATTCAATGTGCAGGATAAAACCGATTGGATGAA 4686 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 3 32 100.0 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : A # Right flank : AAGATGAATGGAGGACGTCCTCAAGAAAGAAATAGGCGCACTCCATGTGACAATTGACGATGCGGCAGGATTCACGGTCAGTCGTTACGGCATATGGTTTTGTTTGACTGGTATGCTTTTCATAGTTCTCAGGGCTTCAGCCGCAGAAGGAAGAAAATAAAATCGAAGTGAAACGATGCTTGGTGATATGTATAATGCTCGCAATGGGCGCGATGAGAGGCAATGATGCGGGGGAATGAGGCAAGGATATGAGGCCGTACAGGGGATAAAATGCGGAAGAACCACCGAAGGATGAAAAATCCAGTGCGGTGGTTCTTTTTTTTTACTCGTCTTGTATGCCATCATTATAGGGGGAGGGGATGAAGGATGTTCCAGGATTTCAAGCTCGTAAGTGACCGGCCGGTCTCGATACAAGTAAAAGAATACGTCAATCGTTTAATTATAAAAGGGGCGCTTCAGGCGGATCAGAAGCTACCTTCCACACGAGAAATGAGCGTTCT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //