Array 1 36157-36852 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJFT01000004.1 Mycoplasmopsis canis UFG1 Contig04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 36157 36 100.0 30 .................................... AAAAATGAGATAAAATGGACAATCAAGATT 36223 36 100.0 31 .................................... TTCAATTCAGTTTCTAAAGGTCGCTATTATT 36290 36 100.0 30 .................................... TTTGATATTGTATTATCTTAATTCTTTATT 36356 36 100.0 30 .................................... GGTCAATCAAGAATTTAAAAACATATTAAA 36422 36 100.0 30 .................................... GCATGCTTTTTATTTTGAAATTAAGCAATA 36488 36 100.0 29 .................................... TCTACTTATTAATAAAGTCGACACTATTT 36553 36 100.0 30 .................................... TATTCATTTTTATAATCTTTTGTTTCTAGA 36619 36 100.0 30 .................................... AAATTACGGCGGAACTAAATGGAGAACTTA 36685 36 100.0 30 .................................... ATAAATTTCTCCACTACCAACTCTTCTAAA 36751 36 100.0 30 .................................... ATTATCATTGCTTGAATTATTATTACTTCA 36817 36 94.4 0 ..............................G....A | ========== ====== ====== ====== ==================================== =============================== ================== 11 36 99.5 30 GTTTTAGTGTTGTACAATATTTGGGTAAACAATAAC # Left flank : TTAACAAAAACTACTTACAAAATATTGCTAATAAAGTGAATAAAAAGATAGGTTACGATCTTGTTAACATAAATGAATCAACTAGTAAACTATTTAAGTCAATGTTTGATATTAAAACAAAAGAATTTATAACATCAAGTTTGTTATACAGTTTTTTAAGAAACATATCACAAGCAGAAAAACAAAATATAATAATCAAAGATATGGATGATATAAGTCTATCTCTTTTAACAGAATTTTCAAATGATTTCAACATTATAGTAATGACCAATAATTCGTTTAATATAATTAAAAGCTCTTCAGAGGTATTATTAACAAATTTTGTAGATGAAAATCTATATACGTTAAAAAATATAGATAATGAGAGCGTTTTTGAATATTTCATTGAAGAATATTTTCAAAAACCGTTTGATAACGTTAATCCTGAACTTATTTACACAAAAGAAACAATGGAAAATATGAAAAAAGCTTTATTTTTAAAATAAATTCTTTGTAATGAG # Right flank : ATTTAAAAAACATTCAATTTATTTTGAATGTTTTTTTAAATTTTAACCTTTGAAATCATATAAATGGCCGCAGTTTCTGCTCTTAAAATTCTTTTTCCTAAAGAAACGCAATCAATGTCGCTATTTAAGGCAACTTCTATTTCGTTATTAGAAAATCCGCCTTCAGGCCCAATTAAGAATAAAACATTAGAATCAATATTATTTTCAATCGAAACTGATTGATCTTGTTTTTCATGAGCAATTATTTTCTTATATCCCTCCATTGTTATTACATCTTCAAATTTGTGTAAATTCGTTAATTCAGGGATAATGTTTCTGAATGATTGCTCAGCTGCATTTTGTAAAATAGTTTGAAATCTCTCTAGTTTTTTTTCAAATTTATTGAATTTATATAATTCGCCATTAGTATACTCAGTAACCATGGGAATTATTTTTGTAGCCCCTAATTCAACCAATTTTTGAAGTGCCCATTCAAATCTTTCGTATTTAATTAAAGAAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTGTTGTACAATATTTGGGTAAACAATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGTGTTGTACAATATTTGGGTAAACAATAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-86.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //