Array 1 7100-2561 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEQAW010000207.1 Streptomyces sp. MBT59 scaffold207_size20507_cov120.8154, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7099 29 100.0 32 ............................. CCTGATGGACATCTAGGCACCCATAGGCAATG 7038 29 100.0 32 ............................. GGGTCACGTCAAGGCATTCGCGCAGGTCACAT 6977 29 100.0 32 ............................. CTCGCCGAGAACGCCCGCGGGGCACCCCCGGA 6916 29 100.0 32 ............................. TCTCACCAGGGCGTCCTGCGGGCCCTTCCGCG 6855 29 100.0 32 ............................. CCCGCGTCCCTTTTACTGTCTGTAGTCGTGCC 6794 29 100.0 32 ............................. CTCTTCGGGTCGGACAGCCACATGATCACGTC 6733 29 100.0 32 ............................. GCCTTGAGTGACGGGTTCCAGTCCGGGGTCGG 6672 29 100.0 32 ............................. TCCAACGGCGGCGGTGACGTCCTGACCGTCGA 6611 29 100.0 32 ............................. GTCAACGACCAGGTGAAGGTCTACCACCCGAC 6550 29 100.0 32 ............................. GTCCCGTGCTTAGTACGTGACGACACGTCTGA 6489 29 100.0 32 ............................. CTGGCCGCGAAGATGAAGACGGCGACGAAGGC 6428 29 96.6 32 A............................ CAGCGCCTTCTGGATCTGCTCGGGCGTGGCGT 6367 29 100.0 32 ............................. ATCGTGGTGCTCACGACGCGCTCACCTCCGTG 6306 29 100.0 32 ............................. TACCTGTCGGTCTCGGCCGCGGACACCCTCGG 6245 29 100.0 32 ............................. CCCACGGTGCCCGCGCCGACCGAGTCATTTCT 6184 29 100.0 32 ............................. GCGTCGTCGTCGCCGTCGTTGTCGACGGTCAC 6123 29 100.0 32 ............................. TCCGTCCAGGGCTACAACCTTGAACACCGCGT 6062 29 100.0 32 ............................. TCGTCGAGGTGGATCGCGCGCAGGGGCCGGTG 6001 29 100.0 32 ............................. TCTGCCGCCCAACGAGGGAACCACCCCGCTCA 5940 29 100.0 32 ............................. GCGAACCCGGCGTTGGGGTACCGGCTGACGCT 5879 29 100.0 32 ............................. TGCATGAGGGCTCGGGCGTTCGTAGTGGCGTA 5818 29 100.0 32 ............................. TACGAGCAGCTGCTCGCCGACTACGAGCGGAT 5757 29 100.0 32 ............................. ACCACCGAGTACCTCGAAGACATGGCGGCCAT 5696 29 100.0 32 ............................. AGGCACCGCACCACCTGCTCGCCCGGCAGGAG 5635 29 100.0 32 ............................. CCTGCCCCGGCCCCGGATCTCCGCTGCATCGC 5574 29 100.0 32 ............................. CGGCCGGGCACACCGTGGTCCGCTGCGACGTC 5513 29 100.0 32 ............................. TGAAACGGCGACATCGCCGGGTACGTGGCGAC 5452 29 100.0 32 ............................. CCGCGCGGCTCCGGACCCTCGTCGGGCACCTC 5391 29 100.0 32 ............................. AAGCAGACCGACGTACGGGGCGAGAGCCAGGA 5330 29 100.0 32 ............................. TCGACGACCGGCTTCGCCTGACCGCCCCCGGC 5269 29 100.0 32 ............................. CAGCCCAGCATGCGGTCGATGCTGGCGGAGGA 5208 29 100.0 32 ............................. GGGCAAGTGCCGCCGCCGCTGGAACCGGTGGA 5147 29 100.0 32 ............................. CGGGTCAACACCGTCCTGGACAACACCCTCAT 5086 29 100.0 32 ............................. AGATGTGGACGGCCCAGCCCGGCGCCCCCGTC 5025 29 100.0 32 ............................. TGCAGGCGCAGGTCGCCGCCGGAGACCGGGCC 4964 29 100.0 32 ............................. GGCCACCCATCAGGGCGCGGTCATGACCGGGT 4903 29 100.0 32 ............................. CTTGTGCAGCAGCTCACCGAGGAGGACGTGAT 4842 29 100.0 32 ............................. AGGGTGAACCCTGTTGCGCTGACGTTGATGGG 4781 29 100.0 32 ............................. AAGCTGATGTCCGTAGAGCGGGAGGACCTGGA 4720 29 100.0 32 ............................. CGGCAGCACACGGTCTCGGTGCGGCTGTCCGA 4659 29 100.0 32 ............................. CTGTGGAGGACCGAGGCGTGTTCTTCTACCCG 4598 29 100.0 32 ............................. ATCCCGCCCGTGCCGTTCCACCCCGAGGCGAA 4537 29 100.0 32 ............................. CTGCCGGAGACGGCCATCAGACCCCGCCGATC 4476 29 100.0 32 ............................. GCGGCCTGCCGCAAGCGATGGCCCAAGCCGCC 4415 29 100.0 32 ............................. TCGATGTCATCCCGAACACCCAGGGCATCTAC 4354 29 100.0 32 ............................. CCGGACGCGCCGCCGATCAGCTCGACCCTCCT 4293 29 100.0 32 ............................. GCCGCCGCGATGACCCCGAGATCCGGGGCGTG 4232 29 100.0 32 ............................. CCGGAGGGGATGCCGGTCTGCTTGCCGTCGCG 4171 29 100.0 32 ............................. TGGCGGACGGTCCCCCCGACGCGCAACACGGG 4110 29 100.0 32 ............................. GTGTCGTTGGCCCGGACCGATTCGACGATCAC 4049 29 100.0 32 ............................. CTGTGCGCGTTCTGCGGCGGGCCCATCCAGCA 3988 29 100.0 32 ............................. CCGCGGTGCCCACTCCGCCGGCCACGGTGTCG 3927 29 100.0 32 ............................. GACAACCGGTGGGCGGACGTTCTCGACCTGAT 3866 29 100.0 32 ............................. CGAACGCGGGCTTTAGTAGTAAGGGAAAATCT 3805 29 96.6 32 ............................C TGCCTCCCCCGCCGGGCGTCCGGCGCCCGACC 3744 29 100.0 32 ............................. CTTCATCGACATGCTCCAGCCCATCGTCGACA 3683 29 100.0 32 ............................. AACCTTTAAAACCCCAGGTCAGAGCCGGTTTC 3622 29 100.0 32 ............................. CCGGACGTCGAGCTCACCGTCGCTGGGTGGGG 3561 29 100.0 32 ............................. CTGACGTGCACCGGGTACGTGCCCGACGCGGT 3500 29 96.6 32 ............................A AGCCCCCGGGGCCGTGGGGCCGCTGCGGGGGC 3439 29 100.0 32 ............................. ACGCCGACGGCGACCAGTCCGGCGCGGCCGAC 3378 29 100.0 32 ............................. TTCCCGGACGCGCAGGGACTGGCCGTCCAGAA 3317 29 100.0 32 ............................. CACCGAACGCAACCGGGGACTTCAGTTCGATG 3256 29 100.0 32 ............................. CCACGGCCAACGCCTTGCCCCTGATCCACTTC 3195 29 100.0 32 ............................. GACGATTCGAGATCAGCCGTATCAACGCAACC 3134 29 100.0 32 ............................. ACGGTGGACGCGCTCGCGGCCGCCCAGAAGAA 3073 29 100.0 32 ............................. GAGGGCAGCGATGCCGAAGACGACTGAGCGCC 3012 29 100.0 32 ............................. TCGGGCGCATCACCATCCCGTCCCGGAACGAC 2951 29 100.0 30 ............................. AAGCTCGGGACCCGCGTTCGGGCGGGCCGT 2892 29 100.0 32 ............................. GCGGACGTCCGGATCACCAACGCGGAGCAGGC 2831 29 100.0 32 ............................. CAAACGGAAGATCGACCTTGCTGTGTGCGCAA 2770 29 96.6 32 ...............C............. GGTGCGGCGACTACGACCCGGAAACCGGCCTC 2709 29 100.0 32 ............................. ATGCCGTCAAGGATGAGGTGGCCAACGCGGCG 2648 29 96.6 31 ...........................T. ATCTGCGGGCAGAGGGTCACGTCGTGACGTA 2588 28 75.9 0 .........A...CT....G.A..-...C | ========== ====== ====== ====== ============================= ================================ ================== 75 29 99.5 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CCCACGCATCGTCACCGACATTCAGCAACTCCTCGATCCCGACCACACCTACGAAGCCCCCGACTCGGCGGAGCAGATGGTCGACCTCTGGGACCCCGTGGTCGGCTCCGTACCCGCCGGCGTCAATCACGGACTCCAGCCGTGACCCGCCCCACGGAAGAACATCGGCCATGTCCTCGATGATCGTCATTTCAGCCACTGCCGTACCCGACCACCTCCGAGGAGCCCTCACCAGGTGGCTTCTCGAAGTCACACCCGAGCTCTACGTCGGCACCGTCTCCGCCAAAGTCCGCGACGAACTCTGGACAGCCGTCACCGCCTGCACCGACGACGGCCTCGCAGTCCTCGCACACCCCGCCGACAACGAACAAGGCTTCCAACTTCATACAGCAGGAAAGCGCCGCCGTGAGCCCATCGACTTCGACGGGCTCACCCTGATCGCCTTTCAACGAGAAGGTCAAGAAACGGCAAAGCCACTCTAACGGCCCAGGTCGCGAAGG # Right flank : CGCCCGAGATCACGCCTGAGGGCTGTTCTGTAGTCCTGGTGGATCAGCGTGCGCGTCAGATGCGGTGCATCGTAAGGCCGTAGGGGCGTTCGCGTACTGGATGATCCCGGGCGCGGAGAACGCGGTGAGGTGCCTGAGCTGTCGTGGTGCGCCCGCCAGGGGTTACGGGGCAGTCCGAAGGGCTTCGAGCAGGCGCTCGTACGCCCGCTTCGGCCGCAGGTCCGTGTCCCATGGCAGGGAATCGGCGGGGCGTGGGGGGTAGATCTTGGTGTCGGCGGTGGAGCCGTACCGGTCGGTGAATCCCCAGGTGGAGAATGATGTGCAGTTCGGCTCCTCCAGACAGACTTGCAGCTTGCCTGCCATCTCGTCAGCCTGGGCCTCTCGGCCGCCCTTCTCGTCCTCAGCTATGGGGACGTCCATCTCCGATACCCGCGCCTGGATCCCGAGTTCCGCCAGATCCTGGACATGGCTGCGGAAGGTCTCCGGGGCGGTGCGGTCGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 16760-19351 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEQAW010000207.1 Streptomyces sp. MBT59 scaffold207_size20507_cov120.8154, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 16760 29 100.0 32 ............................. TCGGCCCGTGACTTCGCGACGTCCTCGTTGTG 16821 29 100.0 32 ............................. TAGTTGATCACCAGTGCGCCGGCCGCCGTGGT 16882 29 100.0 32 ............................. TGCCGGTTCATTGCCCCCGGTCCCTACGGCGC 16943 29 100.0 32 ............................. TCCCTCGCGGACCGGGCGGGCGGGACCCGGAC 17004 29 100.0 32 ............................. CTCATCGGGCCCGCCTCCAGTCAGCCGCCAGG 17065 29 100.0 32 ............................. ATGCCGCCCTCGGCAAAGCCGCGGAACTGGCG 17126 29 100.0 32 ............................. CTGTTCTCCTTGCCGCCGAAGGCGTACACGGT 17187 29 93.1 32 .......AT.................... TGAGTACGGGGGCGCTGGACCCTGCCTGGACC 17248 29 100.0 32 ............................. GCTTGGACTTCGGCGAGGTCGACGTGGTCGTC 17309 29 96.6 32 ............................A CCAGCCCGTCCGCGACCAGGGCCTTGACCGCC 17370 29 100.0 32 ............................. GATCAGCACAGGCCCACGCAGGGGCCTCCAGA 17431 29 100.0 32 ............................. TAGGACCGGCCAGCCGACGACGAGCACCAGGA 17492 29 100.0 32 ............................. TCGCGGCCCTCGTCCTCGCACTTCTTCGCGAT 17553 29 100.0 32 ............................. GAGCAGCGACTCGCAGCCGTTCCCGTCGAGAG 17614 29 100.0 32 ............................. ACCGGGATCGATCTCAGCACGTTCACGGTGCT 17675 29 100.0 32 ............................. TGGCCTCGGTGACCCGGAAGTTCCGGCGCCGC 17736 29 100.0 32 ............................. AGGTTCAGAGAGAATGGGCCCGTGCCCGAAGA 17797 29 100.0 32 ............................. CGGGTCGTCGACCTCCTGGCCGCGTACATCGA 17858 29 100.0 32 ............................. TTGGCGACCAGCGTCCCATTGATGCCGTTGCG 17919 29 100.0 32 ............................. GACACCAAGCGCCTTTACCAGTACCAGGGTTC 17980 29 100.0 32 ............................. ACGAGCTCGTCGGGCCGGAGGCCGTCGCTGAC 18041 29 100.0 32 ............................. TCGCCCAGCCGCGTCATGGCGCTGATCGGGCG 18102 29 100.0 32 ............................. TAGACGAACTCCAGCTGCCAGTTGGTCGATGC 18163 29 100.0 32 ............................. AACCTGTTCCGCGGCTGAGGGCCGATCAGCCG 18224 29 100.0 32 ............................. GTGATGAGGTTCTCCCCGGGCTCCAGGCCCCA 18285 29 100.0 32 ............................. GAACTGGCCCAGTCGGAGCGCATCCGGGAGAA 18346 29 96.6 32 ..T.......................... GCGCGGCGGCCCGGGTCGGTGTCGTCGCAGAT 18407 29 100.0 32 ............................. GTGCTCATGCGCGCGTCCCCGATCCGGCCTGC 18468 29 100.0 32 ............................. AGGGTGGCCTCGAAGGCGAGGAGGGCCAGGGC 18529 29 100.0 32 ............................. CACGTCGCGATCACCACCATGATGTGGATCAC 18590 29 100.0 32 ............................. TCGCCGCCGCGCGGGACGACCGGCCCGGCCGG 18651 29 100.0 32 ............................. CGTTCCTGGTTGAGCTCGGAGTCCATCAGGTT 18712 29 100.0 33 ............................. ATGCCCATGGTGAACCTCCACTATCCGGGGGGG 18774 29 100.0 32 ............................. TCGAGCCGTACGGGCGGGAAGTGGCCCGCTTC 18835 29 100.0 32 ............................. CGGCCCATGGTGAACCTCCACTATCCGGGGGG 18896 29 100.0 32 ............................. TCGAGCCGTACGGGCGGGAAGTGGCCCGCTTC 18957 29 100.0 32 ............................. CGGCCCATCAGGGCGACGGCACCGCACGTGCT 19018 29 100.0 32 ............................. ATGCCCATGCCGCCCACGAAGCGGGTCACGCG 19079 29 100.0 32 ............................. CCTTCACGGCTGTCCATGCGCTTGACCATCGC 19140 29 100.0 32 ............................. CCCCATACGAGACCGGATGTGACGCCGAGGCC 19201 29 96.6 32 ................T............ GTGCTGTCCCGGCTCCAGGAGCGGGACGTGCT 19262 29 100.0 32 ............................. CAGCTCCGCGAGTGCCGCGTCACCGGCTGGTC 19323 29 96.6 0 .......................A..... | ========== ====== ====== ====== ============================= ================================= ================== 43 29 99.5 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GGCACTGACGTACGTCGGATCATCACGAACCGGCCCGTAGAGCAAGGGAACCTGCGCCTGAAAAGGGGGAGAAATCTTGCCGATGTCATGCAAACCCGCCCAGAACGAAACCACAGAGCGGGTCTCAGACAGGCCCAAACCAAGCGCACCAGCAACAGCCAACTTCGTACCGTCGCCCACTACCTCATCCCACAACTCCTGGAACGCAGCACTGGTATCCAGTAGATGGCACACCACCGGATACGGACGCGACAGCCCGTTCTCCTTTCCCCATAACCGCACATCCAAGAAACAGCGTCCCGACACCCCAGCCTCGCCACCCTTCAGCATGCCCACAGAGGTAGCACCCCCCACTGACAACGACCCCGAATCGCCGAAGATGGCACCGAAAGGCGAGCGCGCATTTACACTCGCTGCGCGACGGCGACGAAACGGGAACCATGATCGACAACGGTCAGCAAGAGATGGCAAAGCCACTCAGTAAGCGCAGGTCGCGAAGG # Right flank : GGAGAAGCTGGTCGCCGGGGCTCCCCACGGGTTGTGGGCCGCCGTGCCGTACACAGCAGCCCAGGGCGTTGGTTCGGCAGATAGCACACGCCGTCGACCGCGGGGCGTCACTGCCTGGGTGAACAGGGGGACGTGAAATTGAGACCATCATCCAGATCGTCAATCCGTCGCTGCTCGACGACCTCCGCAAGCAGCGCAAAACCGGGAGCCCTTCATGACCGACGCCTTGGTGGCCTTCCTCCGGGAGCGGCTCGACGAGCAGCTGGAGAAGGCACGCTTCGCCAGCAGCACGGTGGCTAAGGCCCCCGAGCGGTTCGGTGTAGATCCCGAGCAGGCCACGGCGCATGCCCGGTTCTCCGTCGCCACCGCCGAGGTACACCTCGCACTCCTGGAGGACACCGTCATCCCGCACCTGGGAGCAGGTGGGGCAGCCGACCGGACTGCTGAGTACCAGCTGCGGCTCCTGGCCGCTCCCTACGTCGAGCACAAGGACTACCCGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [3-2] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //