Array 1 2666508-2663941 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014167.1 Paenibacillus yonginensis strain DCY84 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2666507 32 100.0 34 ................................ GCTGTAACTTATGGCGGTATTAAGCGCTATGAAT 2666441 32 100.0 37 ................................ AGGACGAGTTGGAATCTCCAAGCTTACGTTATAACAC 2666372 32 100.0 35 ................................ GGTACGAAAGCGAGGTAACCAAATGACACGTGAAG 2666305 32 100.0 36 ................................ TTTAGGTTACTTTATCGCCCGTAGTTTGTCAAGAAA 2666237 32 100.0 33 ................................ GTCATTGATGGAGTCAATCGGCGCTATATCCGC 2666172 32 100.0 33 ................................ TTGCAATTTACGCATAGATGCAATAGTATTATC 2666107 32 100.0 35 ................................ AACCCCAAGCAAATAGCATCCCATTCTTCTCTCGT 2666040 32 100.0 37 ................................ CGAAGCCACCGAAGCCCATCATCATGGCGGATGGCCG 2665971 32 100.0 35 ................................ TATAATTTCATTGAATCTTTCACAGGAATGTCATT 2665904 32 100.0 33 ................................ ATCTCCAGTGAGGACCTTATAAATAGGATCAAT 2665839 32 100.0 35 ................................ ATGACGGCCTAGATCCACTTTGGCAAAGATTTGTC 2665772 32 100.0 36 ................................ ATCTTCGCTAAGTAAACGAACGCCAACATGTTGGTA 2665704 32 100.0 33 ................................ CTTACAACTTGGGAAATAACGCTTACGCATCAA 2665639 32 100.0 35 ................................ GTTTAGAAGACGATAACGAAACGTGGATTGAGATA 2665572 32 100.0 35 ................................ ACGGTTGTGCGCTTGCAGGAGCTGGCAATCCTTCG 2665505 32 100.0 35 ................................ ACAACCAAATACAACGGTATGCTTGAGGAAATAAA 2665438 32 100.0 35 ................................ GACCATGATCCCATCCCCTTACCAAGCATTAAGCC 2665371 32 100.0 36 ................................ CCACGTATCAGATTGCGACGTATTCATCGAGGTCAA 2665303 32 100.0 36 ................................ TGAGCGACGAACAGCGCGACATTATCCAGAACAAAT 2665235 32 100.0 33 ................................ ATTGTGGCCCACTCCTACAGCGAACGATGGGAA 2665170 32 100.0 34 ................................ CTTTGGTACGAGGAATTAGACGAGTTTAACGGCA 2665104 32 100.0 35 ................................ TCCAACGTATGGGTATTTTTGGCCGCCAGTTACGC 2665037 32 100.0 34 ................................ ATCTGGTGCAGAAATGGCCTACCAAGCGGTTGTA 2664971 32 100.0 33 ................................ CGTTTCTGAGAGCATTTTGTGTAGATCATCAAT 2664906 32 100.0 36 ................................ TTCCGGAATCCAAAACTTTAGAATGGCCGGGTGCTG 2664838 32 100.0 33 ................................ AAGACTTGTTTTCTGAACTGAACATCAACTACA 2664773 32 100.0 33 ................................ ATGCCTGGATCAAGTTTATTAAACCATCCAAGC 2664708 32 100.0 34 ................................ GTCTAGGAAGTCTCTTAATTCCTCTGTTTTGTCT 2664642 32 100.0 36 ................................ TCCGGTATCAACTATCACATTTCCGGTCAACAAGTC 2664574 32 100.0 34 ................................ TTTTAGAACCCAATGTCCCAGGTTATCCTGTATT 2664508 32 100.0 36 ................................ ATGTTTTGATCGTAAACGATTATAGGAGCCTTTGGC 2664440 32 100.0 34 ................................ AAATCAATTGAGAATGTGCCGAACACTTCGACGG 2664374 32 100.0 34 ................................ ACCGTCATCAATAAGAGCCATGTTACCTACGATA 2664308 32 100.0 36 ................................ ACCTGCTCGGGAATGCTGCGGATTTAGCTTCTCGGC 2664240 32 100.0 36 ................................ AACTCGCCAGCAAGCATCTCTATCGCGCCCACTACG 2664172 32 100.0 34 ................................ TCACTCTTCGGCACCTGTGACGGCATCATGCGCT 2664106 32 100.0 35 ................................ CAAACTAAAAATTGCAACCGGGTCCGGCGTCCGGA 2664039 32 100.0 35 ................................ GAGAAAGTCCATAACCACAATAAACGGATAAAACA 2663972 32 93.8 0 ...................T.....C...... | ========== ====== ====== ====== ================================ ===================================== ================== 39 32 99.8 35 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : GCCATGCATGCTGTTTCTGAGCTTCAGGTCGGGGTTCCTCAAACGAGTCGTGATGCCTTTGATATTTTACTTAGTCAAGGAATCATTGACGAAAAGCTGGCTGGCAATATGAAAGCCATGGTAGGGTTCCGCAATATAGCGGCACATGATTACCAAGCTGTGCAGCTAGAGATTTTAAAAGCTATACTGAATAAGCATCTTGCAGATTTTATTGCATTTACGAATGCTTTGAAGAAATTTGCAAGCAGCTAAGCTCATGTTCAGTTAAAAATAGCCGGGATTTCTAAGTAAGTAAGCAAAGTGGCCACTTGGCCATTTGGTGCGAACCTAAAGCTCCCATAAAATCTCCGGGGGATTCGCACCTCAGATTTTGTCGAAAAAGACGCTGAATCGTACCTCAGAACATTAGCTGAGAGTTGATTGATCTAGTTGAGTAATGAGATATAATGGAAATGACTCGAATTCATCTTGTTAGGAGATGGAATAGAGGTATTTTCGCT # Right flank : TGCTCTTCGACGGTCCAAGTCGCCACTGCTACCTTGTCTCCCTCCCCATAAGCGTGTAATTACCTATGAAGCACCAAGTTTTAACCCGCCTAGACCCAAACTGCAATTTTCAAATTTTTCTCTAGCGTTAATCCCTAAAAACCACCCTCAACCATTTCTTACAATTTGAACTTGCCTTTTCTTGCCCGTACTTCATTTGGTCCGTATTAAATCTACCAGGCAACACCAACACCAACTTCTGAAAGGAATCAAAAATGAACCATAAAGAAGAACTCACCGGCGGAAGAACCGGACAAATTCATAAAGTTGAAGAGACGGTTATTCGTCCTGCGAATGCTTGGACTCCGCACGTACATAAGTTTCTAAACTTTCTTCATGAAGAGGGGGCAGTTTTTGTGCCCAAACCGTATGGGATAAATGATCGGCAGGAAGAGATCTTATCTTTTATGCCGGGTGAGGTTTTTCATTATCCTTTACCGGATCCAATGCTGAGCGACTCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 3242876-3238810 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014167.1 Paenibacillus yonginensis strain DCY84 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================= ================== 3242875 32 100.0 36 ................................ ATGATGGAGATTTGCTTTTAATTAGAAAACAGGACG 3242807 32 100.0 35 ................................ CCAATTGTTGCGGCAACACGCAAAGCTGAAGAAGA 3242740 32 100.0 38 ................................ GCTTTACATCAAGGCTCTAGCCGCTAACCCGGATAGGC 3242670 32 100.0 36 ................................ CGATATGCGTGGCGCTAACTTGAGTCGTGCAGTTAT 3242602 32 100.0 35 ................................ TTTGAATAACCGTTATCGATTCTCGCTTGTTTAAA 3242535 32 100.0 35 ................................ TCTAACAGATATACTATTACAGAGGAAGGAAAAAT 3242468 32 100.0 35 ................................ CTGCTCTTGCTTCTGTGGCCACTCATAACGTAACC 3242401 32 100.0 37 ................................ CTTATTAGCCCATATAGCGCGTTCTGTGCGAATGGGT 3242332 32 100.0 37 ................................ CTGCGGAGTGAAAATGAAGCTTACCAAGTATCAGGGA 3242263 32 100.0 35 ................................ GCTTCCGGTAAACATCGTCCGTAAAGTCTTTCTCC 3242196 32 100.0 34 ................................ CTTGATACGCCAGAATTAAACTTGTGCCGTCTGG 3242130 32 100.0 36 ................................ TAGAGTACCGGCAAACTTCAGTTTTAATGCTTGAGC 3242062 32 100.0 37 ................................ CCGTGAATACCCCCGTGATAAAGTCGATAATGCCGCC 3241993 32 100.0 35 ................................ TGTTTAAAAGCTTCTTGGATACCCAAACCCCCGGC 3241926 32 100.0 33 ................................ GTTGACCAGGCGTGTATAGTTAACGGCATTAAT 3241861 32 100.0 36 ................................ CTAAAACTGTAACAGACGGCATCTGGAAGCGTGCAG 3241793 32 100.0 33 ................................ TCCTAAGTGTTCATAATCGACTTTGTAATCATC 3241728 32 100.0 35 ................................ TGGATAAGGGTTATATCGAAGTAGTAGAAGAAGAC 3241661 32 100.0 33 ................................ ACAGCCGACGATTGCCAAGCTAAGATTTACCGG 3241596 32 100.0 34 ................................ CTTTTAAGGTTCGCGGTGTGCTGCTGCATATGGC 3241530 32 100.0 37 ................................ CATAAGTCACCCCGTTAATTGTTTTGTATACGGCATC 3241461 32 100.0 34 ................................ GGACTGGTCTTCATAATGGGTTATATTTCTCAAG 3241395 32 100.0 34 ................................ TTTTCTTTTATGTAGTTATTGCATGCATTAAGTA 3241329 32 100.0 35 ................................ CAAGCATCCAGTATGGTATACCTGATAAGTATTTC 3241262 32 100.0 36 ................................ ATTCGCAGGCCATTTTTCACGTCCAATCGAATAAGA 3241194 32 100.0 35 ................................ AAGTGGTTATAATGTCCTACAAAGACTGGACGGCA 3241127 32 100.0 35 ................................ AAGTGGTTATAATGTCCTACAAAGACTGGACGGCA 3241060 32 100.0 33 ................................ CACCTCGCAACTACCAAATGTGTTGTTATCATC 3240995 32 100.0 37 ................................ ACCGATTGGAATATTATCAGCATGAACCGTAGGTATG 3240926 32 100.0 34 ................................ ACCTGGGTTGTCCGTATAAACGGCATCAACCGAA 3240860 32 100.0 38 ................................ CTATATACGATGATGTAACGACATTGACGAAAGCGAGG 3240790 32 100.0 34 ................................ ATCCGGAAGATCAACCGTCATGCCAGCCATACTA 3240724 32 100.0 35 ................................ CTGTAATGAGGTGATCTTATAGTGTTGAAGGCTAC 3240657 32 100.0 38 ................................ CTATATACGATGATGTAACGACATTGACGAAAGCGAGG 3240587 32 100.0 34 ................................ ATCCGGAAGATCAACCGTCATGCCAGCCATACTA 3240521 32 100.0 41 ................................ CTGCCTCTCCGGTCCATCCGGTTACCCCTACGAATTTCTTA 3240448 32 100.0 34 ................................ CGGAAGCGCTCGACGTTGACGGACGGTTGCACAC 3240382 32 100.0 40 ................................ GTTTTCGACGGCGTCAGGCCGGAGCTTGGATACGGCATCC 3240310 32 100.0 35 ................................ CTGAACGGATCGACCGGACGATTCCGGTTTCCCTG 3240243 32 100.0 38 ................................ GCATCGCTGCAGCCTTCGAGCTGAAAAGGTCGCCCATC 3240173 32 100.0 35 ................................ CTTATCTGCAAGAGCTTTAAATCGATCCGCATTAG 3240106 32 100.0 35 ................................ CGGAAGTGGTATCGCTCGTTAATCGCGTACACACC 3240039 32 100.0 36 ................................ TTTTGTGGCAATAATCATTTCGGCCAAACGATCGGA 3239971 32 100.0 34 ................................ TTTGTGGTCACGACAATTTGGGTGACGCCGGAGC 3239905 32 100.0 34 ................................ TCCTTTGCTTCTTCCCAATCTTGTTCTGCCCATG 3239839 32 100.0 34 ................................ CTGAAATTTACTCTGTATATCAAATTTAATGGAA 3239773 32 100.0 36 ................................ ATTTAAGGACATCGGGGAAAACCTGGTTACGCGGCT 3239705 32 100.0 32 ................................ CTACAGGCAGCTCACAAATACGGATATATATA 3239641 32 100.0 35 ................................ GCCAAGCAAGCGGTAAAGGATATTACGAATAGTAA 3239574 32 100.0 36 ................................ ATTCATCCGTCGATAAGCGTGATATCGTGCGTTAAG 3239506 32 100.0 34 ................................ AAGTATTTAAAAATGATTTGTTTGGTGAACTGCC 3239440 32 100.0 36 ................................ CATTAACCGTTCTCGAATCCGGTGTTTGCAATGCAA 3239372 32 100.0 35 ................................ ACAACAACGCCCCAAGAGCCAGACGCAAGGTCTTT 3239305 32 100.0 35 ................................ AATCCAGTATACATGCGTACCAATGGAGGATTGAA 3239238 32 100.0 33 ................................ ATCTCCCGAAGGAGTGTATAGTGCCAATATACA 3239173 32 100.0 37 ................................ CCGGACTGTGAATCCGCCCACGTCCGCCGCAACGACC 3239104 32 100.0 33 ................................ CGTCAACAAAAGGACGAAGCAGGCAAGCAAATC 3239039 32 100.0 33 ................................ CATAATCCGAAGCGCCCCAACAATGCGCTCCGA 3238974 32 100.0 35 ................................ TTTATTCGTGTGAACAAGATTACACAAAAAATGAC 3238907 32 96.9 34 .....................C.......... CATAAGCCTAACCGACATGGCCCCTATTTATATC 3238841 32 81.2 0 ..........................GTTGCC | ========== ====== ====== ====== ================================ ========================================= ================== 61 32 99.6 35 GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Left flank : CACAGCAGGCAACAAAAGAAAAGTTGGGACAGTTTATAAGGCTGTTGGATAAGGCGGGTATGGATGGACAGCGAAAAGTAAAGGGGCGTTCGTATGTCATGCTTCAGGATATGCAGAAGGGTGCAAAGCAAATCGTGGAGGAGATTGAAGGAAACAAAGATTCTTTTATTTTGATAATGGGTGGATTTAAGGGATTAGCTTTGTCCAGACAACTTTCGACTATGGATGGAGTAAAAAGTGCAATCTATGTGGATCATGTTGAAGGATCTTATTTACCACATGGTTTGGTTAGAATGATTCCCGAAATGATGTAACAGCAATTTTAGAGGTCTGGTGCGAACCCCAAGCGAACATGGTTTTCCTGGGGGATTCGCACCACGCGCCCCGCACGGCCAGATAGCATATTGGCCTCTTTTTTGCTATGCTTGAAGCAGCCTTTTACGAGGTTCGCACTTTTCGGCCTCTGAGCCCTTGCTGGGCCTGGGCTCATTTCGGGCGCT # Right flank : GGATATACCGGACCAATTTCTGGATCGGCAGGCTGAATCTTTTTTTGCTGCCCAGACGGACCTGTTCGACGAAATGCCGCGAAATCTCCAGAATCATTTTCTTCCAAATCTGAATGTGCTCAGGTTTTAATTTCATTTGATATAGTAATCGCTCGGTGCATAACAGCGTTCATCGTCGGCGCCCAAGTTTACCGCATAACGGCAATGGCGGCAACAAAACAGATCAAGTGGTTTTAATGGCGGTCAGGGGCTGACCACTTATGATGTACAGGAAAAAAATCAGGCTCCGACTGGAAGGTCGCGATTGATTTCTACCTGCAAAAGACATACACAACATGAAATGAAATAGAGCTGGTCAAGGGGAATACCGACATAAGCATGTATGAGGAGAAATTGCTCATGCAAAAAGGTCTTACGGCGTGAAAGGAACGATTTAGACCAGCCCAGTTTTTTTGGACCGGAAAGTTTTATCAGTTTCCTCTAGGGATCATGGCCGAACA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCACGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 3249777-3246459 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014167.1 Paenibacillus yonginensis strain DCY84 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 3249776 32 100.0 35 ................................ AACATAAATAGCAGCTGTGTAAATCTCCTCATTGA 3249709 32 100.0 38 ................................ ACGTCTACAGATGAGGATTTACAATAAGTCATTGGAGA 3249639 32 100.0 36 ................................ GGTCCATTCGGAGCAGTTGGAGGATGCTAGTATCTT 3249571 32 100.0 36 ................................ ACATCATCAAGCGAAAAGTTTGATACATCGACTGCC 3249503 32 100.0 36 ................................ AGTTCGACAACTTACGACATTAGGAAGTGGATTTAC 3249435 32 100.0 33 ................................ ACGTAATCAGAAAGACTAATAGATACAGCAAGA 3249370 32 100.0 35 ................................ CTATTCGGGTGCAGGATGAAGAAATGGGAGAGGAC 3249303 32 100.0 33 ................................ ATCTGGCATATGACCTTACCCCTCTTTTCTCTC 3249238 32 100.0 36 ................................ TGTGCGGTTGTCACTCTGCTATCAATGTCAGCAATA 3249170 32 100.0 36 ................................ TTGCCAAGTGCAATGAGGTCTATTTCAAGTCGCGAT 3249102 32 100.0 35 ................................ ACCATTAACCCGGACCCTGAAAAGCCGTACATCGG 3249035 32 100.0 35 ................................ CTTTTGTATACTGTTAAATAAGGCGATGTCATGTG 3248968 32 100.0 36 ................................ GTAGCCGATCGAATCGCCTTGGTCTAAGTGAGGAAC 3248900 32 100.0 37 ................................ AAACGTGTTGGCGTCATTAACAGCATCCTTGACGAAT 3248831 32 100.0 34 ................................ TTGCAAGAAAATGGGTACTTGGGGGAGGAGATTG 3248765 32 100.0 36 ................................ AACGTCTTGCAAGTGGGCCGTTATGGACACGCCAAC 3248697 32 100.0 34 ................................ CTGTTCCCGCTTGGCTTTAAGTGGTATGTCCAAA 3248631 32 100.0 33 ................................ AAAAGTGACGGGTGGGCTTGTCCAGCTCCCCAA 3248566 32 100.0 34 ................................ TTTATGGTGCTTCAAAAGGTGGAACTGGATCGTT 3248500 32 100.0 34 ................................ CACCATAGTACCCCATGCTTTTCGATTGCCACCG 3248434 32 100.0 36 ................................ CCGAACGGGGTTCGGAAACGATTAATAGGGTTGCCG 3248366 32 100.0 36 ................................ AAACGGAACATGAACAAAGCTTAATATGATGGTCAA 3248298 32 96.9 35 ........T....................... AAAAGCTCAGGTTACTACCCCGACATTTACGATCA 3248231 32 100.0 33 ................................ GGAAAGGGGAGAGGAGATGGCAGTTCAATTTAC 3248166 32 100.0 36 ................................ CCCTGGTCATTACAGCTCAATGGAGTTGTCCATTGC 3248098 32 100.0 34 ................................ AGCTCCTCTTTTGCTAGGGTGTCGATATGTAAAT 3248032 32 100.0 37 ................................ CAGTAGTAGAGTCCACTTTGACCCCACCACCAAAGTC 3247963 32 100.0 33 ................................ CAAACATAGGAGGCATAAGCTGACGTCGATCCT 3247898 32 100.0 37 ................................ CTATCCGAGTATTGCCTTTACTTTTTCACCTATCCAA 3247829 32 100.0 36 ................................ GGCTAAATGCTGTTGGTTCCAATCTGCAGTGTCGGC 3247761 32 100.0 34 ................................ TCTTTGTGCATGCTGCTCTTTACGTCTTTTACAT 3247695 32 100.0 33 ................................ TATCTCCCGGCGATCGGAAAGCTTAAAAGCCAG 3247630 32 100.0 35 ................................ TCCGACGTTGACGCCTTTACTTCCACATCAAAACC 3247563 32 100.0 35 ................................ TGGTCAAGCTGCTCCTGATTATGAGGACAGGTTGG 3247496 32 100.0 38 ................................ ATCAGAACCCGAACCAAAATATTTATCCATCGGGTCAA 3247426 32 100.0 33 ................................ ATTGCCCGTATAGGTATAACCTTGAGAAGAATC 3247361 32 100.0 34 ................................ CTAAGGCTACCACGATAATAAACCAAGTAGCCGT 3247295 32 100.0 35 ................................ CGCAGATAAAACACGGTGTTCGTCGGCCCATTCGG 3247228 32 100.0 35 ................................ CCGATGGATGCAGTAGAAACATCCGTCTATTGTCG 3247161 32 100.0 33 ................................ TCTCGCAGAGACATGTGCTAACTATCTTCGAAA 3247096 32 100.0 35 ................................ CGAAATATCACATTCGAACCGATGATCAACTCCTG 3247029 32 100.0 34 ................................ AACTCTTTGCGGATGATGCCGAAAAAGAGAAGGA 3246963 32 100.0 36 ................................ CAATCGACGCCGATTCCGTTGACCTGGACATCGATT 3246895 32 100.0 35 ................................ AAACTGGACAATGGCAAGGTACTCGGTTTTGTGTC 3246828 32 100.0 34 ................................ TTCTATAAAGTCAACAGTAGTTATACTCATTCCA 3246762 32 100.0 36 ................................ CGCGATTGCTAGGCTCATTAAATAGAGCTTGTCGCG 3246694 32 100.0 36 ................................ AGGGCAAGGCTGCCGTCAGTATGAAGAATATTGGAG 3246626 32 100.0 37 ................................ GAAAAGAGAAAGCTGGCTGTAGAGGATGAGCTTGCGG 3246557 32 100.0 34 ................................ CTTGATTACTTGAAGAACCAGTGTGTTGTACTGC 3246491 32 81.2 0 ....T..C.............C.A...C...A | A [3246465] ========== ====== ====== ====== ================================ ====================================== ================== 50 32 99.6 35 GTCGCTCTCCATGTGAGAGCGTGGATTGAAAT # Left flank : ATCCGCCATTCTTATGGAAGTAGGTGAGCCCTAATGCTTGTACTCATTACGTATGATGTTCAAACGTCAGGGGCGGGAGGTGCTGCAAGACTGCGTAAAGTCTCTAAGGCGTGTCAGAATTACGGGCAGCGGGTACAGAATTCCGTGTTTGAATGCATTGTGGATGCGGCCCAGTTCACCGCCTTGAAATTCGAGCTGGCCCAGTTAATCGATGAAGAACAAGATAGCTTGCGCTTTTATCGGTTGGGCAATAACTACAAGACCAAGGTAGAGCATATGGGCGCTAAACCATCATTGGATTTAGAAGACCCCTTAATCTTCTAATGGCTCATGGTGCGAACCCCAAGCGCACATCAAATCCCTGGGAGGTTCGCACCCCGCGTCATTAAAGGGTTTGTCAAGATTTTGGCTGAAATAAATCATGAAAATTCGTGCTCCCAAATGGGTTCGCACTTTGGGGTGTGTGAAGCCTTGTGGCTCAAGGCTTCACAAGGCCCGCT # Right flank : CAGTGGTTGCCTGAGTCGGAAATGAATCGCTGCAAATTGATCTGAGTTTATGAATTTATCTTGTTATATACGAATTTTTGAATTGGAGAACACTATGGACAGACGAGATTTTATTTTTTCTTTAGCGTATTTGCCATTGTTAGTACGTTTAAGATGCAAGGAAATGGCTAAATTACCGACCTTCCTTGGTTCTACTTTACATGGTGTTGTGGGGTGGACGTTGCTGAATAACAGAGAGACATATGAATATCTTTTTGAAAATCGCAGATTGGGTGGGGCGAAGCAGGATATTGTGAATCCTTACATGATTGAACCTCCAAGATCGCGAAGCGTCTATCATCCGGGAGATGAACTTTGCTTCAGGTTTGTTCTGTTTGGAGAGGCAATCCGTTATGCGGAGGAAGTAGTAACTGCTTTGGCTAAGGCTGCTATTTTCGCAATTGGGGCCGAGCGGAAGCAATTTGAATTGTTGGATATTCTGCATGCTGAACACTTTCAAC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCATGTGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA // Array 4 3260501-3258667 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014167.1 Paenibacillus yonginensis strain DCY84 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 3260500 32 100.0 34 ................................ ACATGGGAACAAATCGAATCAGCCTATAAAGCCA 3260434 32 100.0 36 ................................ GCTCTGAGAAGTCTTTGATTGCCTTACATGCGCTCA 3260366 32 100.0 33 ................................ ATATTGGCCTCCTAAATGATTGGTTTTTTATTA 3260301 32 100.0 33 ................................ CGATTGTGGTATCCGGCTATCTCCTGATTAATG 3260236 32 100.0 36 ................................ TTTAATCCATAAGGCAAGCCGATCAGGTAACTTTAA 3260168 32 100.0 34 ................................ CGCATCATCGGAACCCCCTGTAAATTTGTTTAGT 3260102 32 100.0 36 ................................ AAGTTTGATTGGGAGCTTGGGCTTTCCGATTGTGGT 3260034 32 100.0 36 ................................ CGAAAAACTATTAGCAAGTTGCGTTATCTGGTCAGT 3259966 32 100.0 36 ................................ ATGATGCTTTCGTACTGGGCGTTAATCGTTGTCAAG 3259898 32 100.0 36 ................................ CACGTGGAACAAGCGATTGGAAAAGGTTACCTTATT 3259830 32 100.0 35 ................................ AGGAGTTGCCGTTACAACTTTTAATATTGCCGTAG 3259763 32 100.0 36 ................................ AGTCCGGCGGATGTAAAAAAGGCAATTATGAAGGAC 3259695 32 100.0 35 ................................ CTCAATCATTGGCATCTGCTGATATGAGCAAAATA 3259628 32 100.0 34 ................................ TTTTAAAATTTTTACGGGCTTTTGCGTCGGATGA 3259562 32 100.0 35 ................................ AGGCAGAAACGGAGGAGGTTATTATAAGCACTCCG 3259495 32 100.0 33 ................................ CTCAAGTGCCTTCCGTAGTCGATCCCTCTCTAC 3259430 32 100.0 35 ................................ AAGACTTGATTTACAATGCGTTAATAGACTAAAAT 3259363 32 100.0 34 ................................ AAAACAGACATCGGCATCCACCTGTTTAACCAGC 3259297 32 100.0 34 ................................ TTTTAATACGTCCATTATAACACAATCCTTCCTA 3259231 32 100.0 33 ................................ AGATTATTGTTATAGACCCGGAAGCTGCAACAG 3259166 32 100.0 34 ................................ ATGTCAAACGTGGTCAATTCCTCCGGTCATACCG 3259100 32 100.0 33 ................................ ATTTTGAATGTAATAGGACTATATTGAGCTACA 3259035 32 100.0 35 ................................ GCTGCTAGTGAGTATTTATAAGGATTCAAGGCTTC 3258968 32 100.0 37 ................................ ATCATCTGTTCGACGTAACCTTTCCAGTGATTATGCA 3258899 32 100.0 35 ................................ TAGGCAGACTCAGTTGGAAGGAATGGAGGTATATT 3258832 32 96.9 34 ..T............................. GATCGTAGCCGCCCATACCGCGTCATGCAATTCC 3258766 32 100.0 35 ................................ CCTGAAGGTGAAAAGCCAGAATGGTTGACGTTCGA 3258699 32 87.5 0 ...A........................G.TG | A [3258670] ========== ====== ====== ====== ================================ ===================================== ================== 28 32 99.4 35 GTCGCACTCCGTGTGAGTGCGTGGATTGAAAT # Left flank : TGAATCTGGCTGTGGTAGGCTGGAACATAAAAAAACCTGGCCAAGAGGTCGTAGCCCCGTCAAGTAGACAATATAAAAAAGACTCCTAACTATGCGGCGATCCATTCTCCGTACTTAATCGGGGAGAGATCGCTCAGTTTGCTTTGAAATCGTCTGTGTTGTGAAACCGGATTATTCGGTAATGCGTTTGCGGGCGTACATATCCTGGGGTTTCTCCAATATGTTTTTTTTGTCTTTAAGCGCGAGAAAAATGACTCTACACATGCGTTATCATAGCGGTTTTCTCGTTTAGAGTGGCTTCCTTCAAATCCGAATTCCTGCAGCAAATCTGGTGCGAACCCCAAGCGCACATAAAATTTCCGGGAGGTTCGCACCTCGCGTCCCGCAACGAGTTCAGTCGTTATGGTAGAAAATGGGGGGGCAATTATAGTATGCTCAAAAGGAGGTTCGCACTTTTGATCTTATGAAGCCTTGTGCAACAAGGCGATATAAGGTGTGCT # Right flank : ATCAAGGAGCCGTATCTTAAGTACTGTTCGAACGATTCGGGCGCAGTATAGATGAATACGTGTTTCCATTCTTTTAGCTCGCTTATTGCTATCTTGTCCCCTGTAAGGTTGCTTTTTTAACATCGTAACGGATTCAAGCTTCTAAAATAGTGTGCATGGTTAGGAGTGCCGTCCCGCAGTCAACTCATCCCAAGAACACAGCTTCAACAATGAACATTATTCCATGCCCATCCGCTTCAGGCCACCACAGTACTGTTTCCACAGAATAAGGTATTCTTATTGAGTAATTTCATAGGACACAATAAATAGAGTGCTCCCGGTTCGCTTTTGCAGAAAAATAATTATGGGAAAATTAGAGGGGGGAATCTATCTTTTTACCTATTTATTGGTGAAAAATGGCGGGTTTTATGGTAAAATGTAACTAATTGTATGTGACATTTTGCGAGGAGATGTGCTTGTGTATATTGCCCATGTACGAGAACTCGATAAAGAAATTCAAC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA //