Array 1 54477-59080 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG667520.1 Corynebacterium striatum ATCC 6940 SCAFFOLD2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 54477 29 100.0 32 ............................. ATTTGGGATGGGTCTGTGCGTTCAGGTAAGAC 54538 29 96.6 32 ............................G TGATGGGGTTTAGCCAGAAGCAGAAGGATGCG 54599 29 100.0 32 ............................. GGGACCAGGGCCACGGCCTTTAGGAGGCCTTC 54660 29 100.0 32 ............................. AGTTTGTTAGTGGCACTGCTACCGGCTAGCCC 54721 29 100.0 32 ............................. ACCGAGCCGATGAACACTAAAGCTCGGTAGTT 54782 29 100.0 32 ............................. ACTAAAGCTCGGTAGTTCCCACACACAGATAG 54843 29 100.0 32 ............................. GTTCTCACCCTTACGCCGGAACAGGAGCGTGA 54904 29 96.6 32 ............................T TTGAGCAGATGCCGGGCCGTGTGGGGGAGATT 54965 29 100.0 32 ............................. ACCAAAAGGGCTATTTCCTTGGTATGGAAATA 55026 29 100.0 32 ............................. GTTCTCACCCTTACGCCGGAACAGGAGCGTGA 55087 29 100.0 32 ............................. ACCCGCGTTGCGCAGTTCACGGAACAACCAGT 55148 29 100.0 32 ............................. GGGTTCTGGAAATGGAAAGGCCCAGCCCACCA 55209 29 100.0 32 ............................. CCTGGATGAGGTAGCGCACGACGTCTTAGAGA 55270 29 96.6 32 ............................G GTCTTCACGCGTGAGTTGCTTTGCTGCGCCTC 55331 29 100.0 32 ............................. CTGACCGGCGGCCAGACCGCGACGTCCTACAC 55392 29 96.6 32 ............................T CTTTTTGTTGGGGCGGTGGAAAGACTGATAGC 55453 29 96.6 32 ............................G GTAAAGGAAATGTACTGGGCAGGCCGAAAGGT 55514 29 100.0 32 ............................. TAAAAACACAAAGACCGGGAACACAAATTTAA 55575 29 96.6 32 ............................T AGGGATGCGGTCACCCCGTTGGTGATTCGGCC 55636 29 100.0 32 ............................. ATCGCATTCCACCGTGTGAAACCCAACGTACT 55697 29 100.0 32 ............................. GGGCGCTGCTTCCACCCATCAGCAGGACCAGG 55758 29 100.0 32 ............................. AATGAGGCCAACCGGCCCCATAAGCACAGCCA 55819 29 96.6 32 ............................A GCATGTGCGCGGCGCTCGACGGCGGGAGCATC 55880 29 100.0 32 ............................. TCACCACACAAGGCCCAGACTTCCAAGCCCTC 55941 29 96.6 32 ............................G CCACAAGCGGCGGGCCATATCCTAGGTATTGA 56002 29 100.0 32 ............................. GTGGTGTACCACTACCTGTCGCGCAACCTGCC 56063 29 100.0 32 ............................. TACTGGCATCCGTTTGGGTGTTCCTGATGGGT 56124 29 100.0 32 ............................. GACCTGGGAGCAGACCCACGCCACGGCATCAG 56185 29 96.6 33 ............................A CCATCACACCGGCCGCCCCCACCGTCTTCACCG 56247 29 100.0 32 ............................. CATGGGTAAATCCGGCGGTGTCCGGCGTGAGC 56308 29 96.6 32 ............................T GCTCGCCGTAGCTGCGTGTATAGCTTTTGGGT 56369 29 96.6 32 ............................T CCTCCGCTGGGGATGGGGAGAGTAAAAATGAA 56430 29 96.6 32 ............................G TCTGGTTCGCGCATGCTTGAGACGTTGAATGC 56491 29 100.0 32 ............................. CCGACGATGGGGGCGGCTGTCGTGGTTGCCGA 56552 29 100.0 32 ............................. ACAATCGCAACAACTGCTCATGAGACTCACCA 56613 29 100.0 32 ............................. AACTTCAGCCGACGCCTGTGGGAAACGATCGG 56674 29 96.6 32 ............................G TCGGCGCACTGTCCGAGGCTTTAGATGGCTTC 56735 29 100.0 32 ............................. GCAGCGACTGCAACATCTTGGGAGACGTGGCC 56796 29 100.0 32 ............................. CATGACTAAGACCCTCGCAGACATGACCCCAG 56857 29 96.6 32 ............................G GCTTCAGCTGATGAAGCTGGAACCGCGTTTCA 56918 29 100.0 32 ............................. ACTTCAGACTGCGAGCCGTGTTTGAAGCCCGC 56979 29 96.6 32 ............................G GCCACGCGGCCTGCACAATCTGTGATGTTTTC 57040 29 96.6 32 ............................T CCCAGCTCGCGGGCAGCATCCGCCGCGCCAGA 57101 29 100.0 32 ............................. TCCGTAAGGAAAACGCGAAGTACCGTACCGAG 57162 29 100.0 32 ............................. ATCCTTAAGCGCCGCATTCGGGTACGTGCCAA 57223 29 100.0 32 ............................. ACAGCACCGACGCTGTTCTGAATCTGCTTACC 57284 29 100.0 32 ............................. TCGGCAAAAAACTAGCCCCCGACCGATTCCCC 57345 29 100.0 32 ............................. TCGACGCAATCACTGGCGACTGTCATGAAAAC 57406 29 100.0 32 ............................. ACTCTGACGGCACCGACCATCAAGGAGTACGA 57467 29 100.0 32 ............................. ACCGGCTTTAACTGGAAATGGGAGGAAGCATG 57528 29 100.0 32 ............................. GTAAAAGGGGGAGGTGCCTGATGGACTCGATT 57589 29 100.0 32 ............................. CAGGGCAATGACCCGACCGCACGCACCCTCAA 57650 29 100.0 32 ............................. GATTCGTAGACGAGAAAGACGCGGCTATCGTC 57711 29 100.0 32 ............................. CCTGTTGAGCTGCTTTTTGGCTTCCAATGGGG 57772 29 96.6 32 ............................T TGAGTAGGGCGTTTAGGAGTGTGGTATCAACC 57833 29 100.0 32 ............................. CCCACGACTTGGCCCCAGGACACGATGTCATC 57894 29 96.6 32 ............................G GAGGGTGCCCTGTCTGCCAACAAGATCGGCAC 57955 29 100.0 31 ............................. CCCACGCGAACAGAAGCTAAAAGAGCGTGAA 58015 29 100.0 32 ............................. ACCCCGCCGCGCCCGCTGGTACATGCTCCCCA 58076 29 100.0 32 ............................. CCAATACCCATACGGGGCGAAACCTGAATCCG 58137 29 100.0 32 ............................. TCAGCACCGACGCGTGGGAAAGTAGAAATGAC 58198 29 93.1 32 ..........T.................G GGTTGGTTTACCTGTGATTAGGGCGTGGAGTT 58259 29 100.0 32 ............................. AATGCGCCGTCCACGTCCGGCCGTGAGCTGGC 58320 29 100.0 32 ............................. CAAGCAGGCCATCCACACAGCTGTTGTGGAGC 58381 29 100.0 32 ............................. ATTCCGGCAACCTTGGATAGGATTTGCTCGGA 58442 29 96.6 32 ............................T CTACGCCTGCACCAGCCCCACCTACCGACAGG 58503 29 100.0 32 ............................. AAGAAAGGCACCCGCGACGGCGGCAACCGTCC 58564 29 96.6 32 ............................G CGACCGGCTGGAACGGTGCTCTAGCAAAGACT 58625 29 100.0 32 ............................. AGCGGTATCCCATGCGGAAGAAATCTTATTAG 58686 29 100.0 32 ............................. ACACGGCACTCGAAGATGCGAAAACGGATCTG 58747 29 96.6 32 ............................T TACGCGATATGGAACTGGATAAGCTCAACCAG 58808 29 100.0 32 ............................. CAGGCGGAGAAGCCATGTCTTATGAATACGCG 58869 29 100.0 32 ............................. TTCACAAAATTCTCTCGGTCTGGATGCGCGCT 58930 29 96.6 32 ............................T ACGCTTGTGTGCGCGTACGGGATGCCGGGTAG 58991 29 96.6 32 ............................G CCGGAGACCCGCGTAGCTGGCGTGCAGCCGCT 59052 29 89.7 0 ................T.....A....G. | ========== ====== ====== ====== ============================= ================================= ================== 76 29 98.7 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTACTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGCGCTGCCCGAAATGCTCGTCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : CTTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAGAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTCAAAATCGGACCACACGGTCCCTACATCCTCATCACAAGATACGAGCAATCCCCATTTATGTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGGGTGAAACCCTATACAGCGTCGAAGCGACGTTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGCGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGGGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //