Array 1 75329-73574 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABZFD010000001.1 Mycoplasmopsis anatis strain DP12 DP12_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 75328 36 100.0 30 .................................... TCAAGTGAATACATTAAAGATGATGTCTAA 75262 36 100.0 30 .................................... AGTTATTGTTATTGACCCGCAAGATGAATA 75196 36 100.0 30 .................................... ATTTATTGATGAGAAAAAAACTTATAGCAA 75130 36 100.0 30 .................................... ATATTGATTTTAATAGTAAATTTATTGATA 75064 36 100.0 30 .................................... AAACCATTAAAGATATTACTACTATTAATA 74998 36 100.0 31 .................................... TTATAGAGCAATTAAACTATTGAATTATTCT 74931 36 100.0 30 .................................... TTAATAATTCTAATATTTCAATTAATCCAC 74865 36 100.0 31 .................................... AACAAATTTTAAATATTCAAAAAGACAAATA 74798 36 100.0 30 .................................... TTCATAATTACTAAAATAAACATAATTTTT 74732 36 100.0 30 .................................... AACCAAATTGGCTTCATTAAAACCAAACGA 74666 36 100.0 30 .................................... GAAAATATGTCAGACAATACATTAACTTTA 74600 36 100.0 30 .................................... TTAAAAACTACTATTCAAAATAACAGTAGA 74534 36 100.0 30 .................................... AATTCTTTTTTTTAATATATCTGTACATTT 74468 36 100.0 30 .................................... AAAACTGCTGAAAACGCAAAAAATGAGTAG 74402 36 100.0 30 .................................... AAGCAATCGTTAATTGTTAACATCATTACA 74336 36 100.0 31 .................................... CATGCATTAATCTAACGTTTAAACTAGCTAC 74269 36 97.2 30 ...................................T TTGAAAAACAATGAAATTAACAGTGTGATT 74203 36 100.0 30 .................................... AGAGCATCCAGTAATGGAGTAGTATTAAGA 74137 36 100.0 30 .................................... ATTCTTTTCTTTAAATATATCTGTACATTT 74071 36 100.0 30 .................................... CCGTCTGATGTCGGAATCAATATAACCACA 74005 36 100.0 30 .................................... TTATGCTTCAACAGGAAATAAAAGTGTTTT 73939 36 100.0 30 .................................... ATTTCATTTTCATAATTTCTATGATTGTGA 73873 36 100.0 30 .................................... ACAACATCCATTACTATTTTTAACGAGCTA 73807 36 100.0 30 .................................... TTCTGTAAAAAATGTATAGTTAGCAATCTT 73741 36 100.0 30 .................................... ACTAGTTTTTTTAGTTAAAATCTCATTATC 73675 36 100.0 30 .................................... TCATTGTTCTGCTAGCTTGCTCAACTATTC 73609 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 27 36 99.9 30 GTTTTTTGGTTGTGCTAAAGTTGAGTTAGTATAGAC # Left flank : ATTATTCTGATTCATTAAATTCATTCATAGGTGATGATTTAATATCATTTCTACCTGATGCTCAAAAAATAACTAAGTACATTTTTGATATAGATGAAAACAAAGTAATAAGTAAAAATTCATTACTAAAATTTCTACATAACTTTACTACTGAAGGCAAGGTAAATATTATTCTTAGAAATATTGACTTTATCAAAATTAATGATTTAACTAATTTTCTAAGTTACTATAACTTTATCATCATCAATTCTAATCCTTTTAAATTACTTAATAATTGAGAAGAATTGGAATTAATATATATTGACTATGAAACTGAATTAATTCACATAGAGAATTATGAAATATTAAAATTTCACATAACTAATAAATTTGAATTATTTGATATTGATTACAAGGATATCAATAAAGATTCAAAATTATTGAGAAAAATCAAAAACTATGTAGATTCTAAATTATCTATTAATTAATGGTATAATTTTTATACCAAAAAACAATTTGAG # Right flank : AAAATTAATTAGAGAAGGTTATTCTAAACTAGAACACAAAAAGTTGACATTATTTTGCCAACTTTTTGTGTTCTAGTTTAGTTTGTATTGGTTTCTTGATTTTAATTAATAATTTTAATATGGCTTAAATTTATCAATGAATATAGACACTTTTGTAGATGCTTGTGAAAATCCATTATTAGCATTTTGTTTTAATTTGGGCTCAAAATTCTCTTTATTTTGGATTAGACTACTATACTTTATGTTTGCATCAGCAATGTTTTTGTACTTATTGTCGTTGTATTTTATAGTTTCAATTTTAACTAAATTGTGTGAAACATGATAATTTTTGGTATCAATATTTTCATCAGAATATTTAAATACCAAATCATTATAAACATAAACTAAAGAATCAAATATTTTTTTCTTATTATTTTTATCGAATTCTAATCAATTAATACTACTAAAATTACATTTTAATCATTCAATTAACATCTCTTTATCTTTTTTATTTATTTTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTTGGTTGTGCTAAAGTTGAGTTAGTATAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //