Array 1 649660-649950 **** Predicted by CRISPRDetect 2.4 *** >NZ_CEKZ01000003.1 Paeniclostridium sordellii strain R28058, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ========================================= ================== 649660 26 80.8 38 T....G..T.............AA.. ATGTTTAAATAAATTGAAAATGGTAGTGTGTAAATAGA AT,A [649670,649680] 649727 26 100.0 39 .......................... AATGTTACATTTCCCGTAAATTAAACAAGTCCATTTATT 649792 26 100.0 40 .......................... AAGGAAAATTGTCAATGGATTACTTAAGAATGCGGATAAA 649858 26 100.0 41 .......................... AAGGTATTTGAGGTTTATATTGAGAACCATAAGAATTTATT 649925 26 92.3 0 ......................A.A. | ========== ====== ====== ====== ========================== ========================================= ================== 5 26 94.6 40 GTTATTAAAGAACTATATTGTATTTA # Left flank : GATATGAAACTGGAGGAGCTAAGTTTGAAGCTGGTAGACATACACATAAGACAAGTTCAGGAATTGGAGTTGTAAGAGGTACTGCATATCAAGAATTACTTTGTGATGTTAATTTAATAATACATATTACACATAAGGATTATGATGTAATAGATCATATTTATAAATCTTTTACAACTGATATGCAAAAAACGATGACACTTGGAAGAAATAAAGATATATGCAATTTACTTGATGTTAAGTTAGTAGATATTAATAATTCTAAAGATAAATCAACTGTATTGAAACATAATGCATTTATAGTTAATGATGCTTTTGAAAGCAAAAAAGTTAATTGCACTAGATTTAGGTTAAATACTTTTTACTCATATAATGAAATTTCTAAAAAAGATAAGATAAGGGAATTTGAAAAAGTAATAGCTGGATTTGTATCTAAAGGTACTAAAGTTAGACTTAAAAAAAATTATAACTTAGTAGATTCAGAAAACTTAAATGTATAT # Right flank : AGTAATTGGTAGTTAATTTATATATTAAAAAATAATATGATTTTAAGAAAGGGATATAGCTGTTAAGATGGATATGTTTTATGCGAAAGGAAATAAGGAAACAATAGAAGAACACACATATAAAGTGCTTGAACAATTAAATAGAGTAATAGATCTATATAAAGCAAATATAAAATATCATGAGCTAATGAGATTAGCAGTTAAATATCACGATGCAGGTAAAGTAATGCTATCATTTCAAAAGAAATTAAATAACGAGCATTTTAAAAATGTTGAATTTATAAAGCATAAAGATTATATAAAACATAATCATTTATCAAGCTACTTTGTTTTAAATGAAGAGGTTAAAGATCTAGATTATGATGAACTAAGAATGTTATATCAAATTATATATTACCACCATCAGCAAAAGAATAGCATATTTATAAAAAACTTAGATGGAGTAGAAGAAATAATAGACTATATTTCAGAAAATATATTACCTAATTATGACTTTAATT # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAAAGAACTATATTGTATTTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:84.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 652221-653171 **** Predicted by CRISPRDetect 2.4 *** >NZ_CEKZ01000003.1 Paeniclostridium sordellii strain R28058, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 652221 29 100.0 38 ............................. CTGAGAAACTAGAATAATCTATTTGTTTTTCTCCTACT 652288 29 100.0 37 ............................. CAAGATATTTCTATGTGTTCTGAATGTGAATCTAAGT 652354 29 100.0 37 ............................. ACAGCTAAGTCTTTAGGTGTTAATTTAGAACAAGTAG 652420 29 100.0 37 ............................. TTGATGGTATATTAGGTGAGCCAGTTAGTAAAATTTT 652486 29 100.0 37 ............................. CAAGTTATTGAAACTGTAATTGAAGATATTAAACCTA 652552 29 100.0 37 ............................. AAAAATGGGACACTGAAAATTATTATTTTTCTTTTAA 652618 29 100.0 38 ............................. ATGAGCATGAACACCAGTACTATTTCCAGTCGTTCCTG 652685 29 100.0 36 ............................. TTAGCTTTGCATATCTCTTTTACTAAATATTCTAGT 652750 29 100.0 37 ............................. TCAGCCAACGCTGGTATCTGTGGTAAATTGATGCCAA 652816 29 100.0 38 ............................. TAGGTAGGTTTGCAATTAGCATAGGTAAAACAGCTTTA 652883 29 100.0 37 ............................. AGATAAAAAAATGGTGGGGATATACGCAAAAAAACTT 652949 29 100.0 35 ............................. TAAAAAAATTGTATCAGGTTTAGGTTGTAGCTAAT 653013 29 96.6 35 ...................A......... TAAGTGATTTAATCACTTTCGTGAACTCTTTTATT 653077 29 89.7 37 ............TC...C........... TTCTCTTCTACAATATGGATACTCTATATTAGTTGAT 653143 29 93.1 0 A......................A..... | ========== ====== ====== ====== ============================= ====================================== ================== 15 29 98.6 37 GTTATTAAAGAACTATATTGTATGTAAAG # Left flank : GTAAAATACATATATAGTGTAGAGAATTTAAAAAAACATAATTCTGAGTATTTGCAAGAAATCAGAAATACTATAAATAATATAAGATTACTAAATGAAAGTGACATTAAAGCAAAAGATATAAAGGTTAGAGAACTTGATACTGTAACTATTATACCAAGAATTTTAGGAACTGAATATAATAGGGAGAATACTATAGTTATTAGACGAGATATTTTGAATAAGTTATTAAAAACTAAAGAAATTAGTTATGATAGCACTAACAATTGTTATTTTATGGATGTTAAATATGATTTTGAACATGGTCTTTATTTAGATTAGAATATATAAATATGTGTATTTGCAGTGACCTAGTTTTATAATTAAATGGTGTTAATGTATTGAAAATACTACGATATAATTAGGTTTAATATAAAAGTGAGAAAACACTATTGAAGGTTCACTGCAAATTACAATAAAATAATGTGTGTAAGTATTGAAAATACTTATATACACTTGGG # Right flank : GCAAGGAAAAAATACTATGGATGAAGTAAATGATTAGTTATTAAATACTAAATTAAAAATATAAATGAATGTAGATACTAAGAATGGATTTAATAAAATATAGTTATATAATTATAGCCTAAATCCAAAATACTATAAAAATAATAAAATAAGAAATAATATATAAAAATATACGGAATAATAGTTGATATATAATAAGAAAACCTAGGAGGAACATAATGAAAATTCAATATGTACAAGGTAAACCATTATTTACAACTATAAATAAAAATAAAAAACAATATCCATATTTAACAGACGATATAGAAACTGATATATGTATAATAGGTGGTGGAGTTACAGGAGCCATAGCATCTTATTATTTTAGTAAACAAAATATTAAAACGGTTATACTAGAGAAAAAAAGAATAGCACATTTAAGCACAAGTGTAACTACATCTCTTTTACAGTATGAACTAGATGATAATTTATCAGATCTTCAAGAATATACAAGATTAGAA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAAAGAACTATATTGTATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //