Array 1 1036-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALKG01000139.1 Selenomonas sp. FOBRC6 contig00040, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 1035 31 100.0 34 ............................... TGCGTACGTCGCCGCTTGTTTGAGTGCGGCGGGT 970 31 100.0 35 ............................... TCTGTCCGCGAAGTCCTCAGTGGCGAGGCAGACGT 904 31 100.0 36 ............................... GGCAATAATCCCCTTGAAGTAAATCTGGTCATATGT 837 31 100.0 34 ............................... TTGGCATCGCCGGGGTGTGGTATCTGCTCGGCGT 772 31 100.0 36 ............................... CCTTTTCCACGATGTCGAGTTTTGCGCCGTTCATGT 705 31 100.0 36 ............................... ATCGAGTTGGACGGTGTAGGATCTCTGCTCGCGGGT 638 31 100.0 36 ............................... AACAATAACCGCCGTAAACGATCATAAGATGGATGT 571 31 96.8 36 ........T...................... GACCTCGATCTCGTGGAGTGGAAAGACCTCAACAGT 504 31 100.0 36 ............................... CCCTCCTGCTTGCCTACCACACGGGAGCACGTATGT 437 31 100.0 36 ............................... TCCAAAAACTCTGCAAGGATGCGGGACTTGCGCTGT 370 31 100.0 36 ............................... AACTACGAGGTGGCAGGTCGGGACATTGCCCCGGGT 303 31 100.0 35 ............................... TTTGACAAAGTAGCAGTCAAGACGTTGGATGTGGT 237 31 100.0 37 ............................... TGCTTTTGGAACAGTACGCTGTCCGATGGGACAGCGT 169 31 100.0 38 ............................... ACGTTGAGATCGCGCCGAAAAAGCGCATAGTTGACCGT 100 31 96.8 36 ........C...................... AAGGATTTTGACGATTTGATCGTTGCGGCGGGCGGT 33 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ====================================== ================== 16 31 99.6 36 CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Left flank : GCCTATCCGCCCTTTTTGTGGAAATAGGGGATTGCAATGTACGTTTTAATCACCTATGATATTAGGACACGCGATGCAGACGGTCGCAGACGCTTGCGGCAGGTTGCACGAAAGTGCAGAGCCTATGGACAGCGTGTGCAGAACTCCGTCTTCGAGTGCAAGGTCGATCCCACGCAGTGCAAACAGCTGGAACTTGCATTGTCGGATATCATCGACCTGCAGGAGGACAGCCTTCGGTTTTACTATCTTGGCAAGGATAAAGGCCCGAAGGTCAAGCATTATGGCACGAAAGAATCTTACGATCTGGAATCTGCCATTATCATCTGAGCATTCTTCTGGAGTGCGAAGGTGAAGTGAACAGAAAATGTAGCGAAAAGATATAGGTATGCGAACCATGCCGGAGGAGGGGCGTGGGGCAGAATGCCGAGAAAATCATATTTGTGGCGAGTAACACCCATAAATATGTGGCAAAAGAGGGAAGTCGTAACCTCGTTTGCTGT # Right flank : CCA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.30,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.42 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1991-1760 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALKG01000021.1 Selenomonas sp. FOBRC6 contig00039, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 1990 31 96.8 36 ...........C................... GATGCCGTACTGCCACGAATACGCGAGATACTCAGT 1923 31 100.0 35 ............................... AGTCGCATCAAGTCCGCGCTCGACATTGACACTGT 1857 31 100.0 36 ............................... CCGCCCGTCACCTCGTAATCTGCGAACGTGTCCGGT 1790 31 93.5 0 .A........G.................... | ========== ====== ====== ====== =============================== ==================================== ================== 4 31 97.6 36 CGCGCCCCGCATGGGGCGCGTGGATTGAAAC # Left flank : CCGATTCGCCGATGAATTCCTCGCCATGAAACG # Right flank : AAGGCGCTGGCATATATGTACCCTCATCTCGATGTCGCACCTCACATGGGGCACGTAGCTCGTCCTATCCACTGGACTACGAGCGTATATGTACGACCTTTATAGAATAGCAATGAAAGAGTAGGTAAATATTTTCCGGTCGCTATAAAATCGTTCATTGTTTCTGGTATAATAATAAAAAGTGTTTTATCGGGGAGTCACTGTGACGATCGGAGGCAAGGATGAGCGTTATCTTTACTCTTTTCTACGCATTTATCGTGATAGTAGTATATCTTCTGATTGCGGTGATGATTCTTTGTTTCCTTTTTCTTGTTGTAAAAAGTGTTTTTCTATATATAAAGTGCGCTTGTGTATTTGTTTATCGACGATACGGTAAAAAGAAGGTCTCTGAACCTTCGCGATTCTGGTTCACCCTGCCGGACGGCAGGAGGCGGTATCTTCCTTAGTTACTCTACGGTTTACATCGATGGGGGAGGATTCCAAAATTTGCCCATCCTGCC # Questionable array : NO Score: 8.74 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCATGGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.30,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //