Array 1 282238-283364 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNLW01000012.1 Pseudomonas aeruginosa isolate PSA-4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 282238 29 96.6 32 ............................A GCAGGATTTGGAGTCGGAGCGTTTACCTACAT 282299 29 100.0 32 ............................. GTGAACGATGCGAATCGGGCGGGGGTTTGGTC 282360 29 100.0 32 ............................. GCTTGGTAGATGCCTGGAACAAGTCGGTCAGC 282421 29 100.0 32 ............................. CGCGCTGTCCTCGGCCTGGACTGGACCATCGA 282482 29 100.0 32 ............................. TGGGCGAACGACGGCAGCGTCACCCAGGCGCA 282543 29 100.0 32 ............................. ACAGGGACGTTCTCCGCGAGCTGGCCATCGAC 282604 29 100.0 32 ............................. GCAGAGCGGATTGCTGCCCGCTTTGTCGGCAC 282665 29 100.0 32 ............................. GGGGTGGTAGCACCGGACTCGCGGATCTTGAA 282726 29 100.0 32 ............................. GCGTACATGACTGAGGGAGAGTCCACGGACCT 282787 29 100.0 32 ............................. TCATATAGCTTGTATTTTTCCTTGCTATGAGA 282848 29 100.0 32 ............................. AAAAACGACGGCATTCACTACGCGCGCCAGGC 282909 29 100.0 32 ............................. GCGTTCATTTCCCAGGACGTGGACCAGCTGCG 282970 29 100.0 32 ............................. GCCCCAAAAAGCGTTGGCGTCATCGGCTGGCT 283031 29 100.0 32 ............................. TTCATGAACGGCAGAACGTTGAGCGCCGATTT 283092 29 100.0 32 ............................. GTTGTTCTAGAGTCCGTTCAGGAGATGCTTCT 283153 29 100.0 32 ............................. AGGTATTCCTTGCCCTTGGCCAGGAGCACGCC 283214 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 283275 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 283336 28 79.3 0 A..........A..C..-.....A....T | C [283340] ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.2 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACCGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTTGCATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : TGTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCATGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTAATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 292537-294275 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNLW01000012.1 Pseudomonas aeruginosa isolate PSA-4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 292537 29 100.0 32 ............................. GGATTGCTTCGCCCATCTGCCGGGCCTTGCGA 292598 29 100.0 32 ............................. ACCGGATGCAGTCTTAATCCCTTTTTGCGTCG 292659 29 96.6 33 ............................A GTTATGCTGGTGCTGTCATAGATCATGTCGAAC 292721 29 100.0 32 ............................. CTCTACGACGAGAAGTTTGGCCTGTCGCTACT 292782 29 100.0 32 ............................. TCTATGGGAGGTGGGGAGTGAACGAGACCGTA 292843 29 100.0 32 ............................. TTGAGGGCAAACGACGTTTTGCCCATCGAGGG 292904 29 100.0 32 ............................. TAACGGCCCGCCCCTTCACGCGACCTCCCGCG 292965 29 100.0 32 ............................. CCAAGAAAGAACGCCGAAAGGCCGTTAGGAAA 293026 29 100.0 32 ............................. ACGTTGAGTACGTCGGCGCCGTACTTTTCGTC 293087 29 100.0 32 ............................. CGGGCCTTGGCAGCGAGCAGGGCCTTCATGCC 293148 29 100.0 32 ............................. CGCACTGATGCCAGAGCCGGAGTCGCGACCGG 293209 29 100.0 32 ............................. TCGGCCATCACTGGCAAGGTGCGCGAAGGCGT 293270 29 100.0 32 ............................. GCGCTTCACGGAGACGGCCTGCTGTTCCCTGC 293331 29 100.0 32 ............................. TTCAGCAGGGCGTCAGGGATGGCATCGTGTCC 293392 29 100.0 32 ............................. GCTACTGTCGAAGCCGGCACCACTCTGGACGC 293453 29 100.0 32 ............................. GCCGGATTCCGCTGCCGGGCTACATCATCCCG 293514 29 100.0 33 ............................. CGGGGCATGACTTCAACCCACCCCCAGCCCTCC 293576 29 100.0 32 ............................. TCGCACTTCCAGCCATGGCTGGACAAAGCGGC 293637 29 100.0 32 ............................. GCAGTCAAGGCTGCCGGCGGCCAGTCCGCCCT 293698 29 100.0 32 ............................. GCCAGCAGGGATGCCAGCACGCAGCCAGTCGC 293759 29 100.0 32 ............................. CAGTGACGGCAGCAGACGCGGCGATGCTGGAT 293820 29 100.0 32 ............................. TCGGTAGACGCACAGATGGTCGAGCAACTTCG 293881 29 100.0 32 ............................. GCGCAGGGCAAAGCCAAGGTCACCGCCGGCAC 293942 29 96.6 32 ...........A................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 294003 29 96.6 32 ...........A................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 294064 29 96.6 32 ...........A................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 294125 29 96.6 32 ...........A................. ATGTAGCTGTTACGCGGTCCCGCGGTGCTGAG 294186 29 96.6 32 ...........A................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 294247 29 93.1 0 ........T..A................. | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.1 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : GTGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGATAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //