Array 1 417379-416509 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWLB01000001.1 Pseudomonas aeruginosa strain 19 IPC1602_1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 417378 28 100.0 33 ............................ TCGTTCACGCAAGAGGGCACGGACGGCCTCGAT 417317 28 100.0 32 ............................ TAACGTAACGTCTGCACATTATGCGAAGCCAG 417257 28 100.0 32 ............................ AAAATCTGATGCCGACCATCGTGATTTCGAAC 417197 28 100.0 32 ............................ GCCCGCTGGGGAAGCCGCAGTTATCCGGAGTA 417137 28 100.0 32 ............................ ATGCTCATTTCGCCACCTCGATTCCGGCTTGT 417077 28 100.0 32 ............................ AGGTTGACCAGCATGGCCGGCATCGACAGCGT 417017 28 100.0 33 ............................ ATGCAGCCAGGGCTTACTCCGCTGCTGCTGGAC 416956 28 100.0 32 ............................ TTGAGCTTGTCGTTGTACTCGTCGAGGCTCAT 416896 28 96.4 32 .............T.............. ATACTGACTCAGCCAGGGAAAAGTCACTTGGA 416836 28 96.4 32 .............T.............. AGCGTGCCATGGCGGCGGTAAGTCAAACCGTT 416776 28 96.4 32 .............T.............. TGGTCGAACAGATGGCGGTCCTCGGCCAACTG 416716 28 96.4 32 .............T.............. ACGTCGGAACGCAACTACCTGACCGCGTTGGT 416656 28 96.4 32 .............T.............. ATCGACCACGACAGTGCTTCCCTGGTCTATTC 416596 28 96.4 32 .............T.............. ATTGGCCGTGCAAGGTCCACCAGTCGATGCTT 416536 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 15 28 98.3 32 GTTCACTGCCGTACAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCACTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTTGCATCGCCCATCACAAGACCTTTCGCGCTCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAGGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCTGGAGAGCCGGCGGATAACCGCAAGC # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTAAGAAA # Alternate repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //