Array 1 1137353-1136592 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP025400.1 Streptococcus thermophilus strain EPS chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1137352	    36	 100.0	    30	....................................	TAATTCTTTCAGGTATGAAACTAGAAACAC	
   1137286	    36	 100.0	    30	....................................	TAGTACGCATAATCAATTCATCAAGCTTGA	
   1137220	    36	 100.0	    30	....................................	GTAGTGACCCAAAATTCTATGACCTTGAAA	
   1137154	    36	 100.0	    30	....................................	AGATTGTGGTGCTTACGGAAAATTCCTTGT	
   1137088	    36	 100.0	    30	....................................	TGGCAAGAAGTGTAAGAGATGCAATGGATA	
   1137022	    36	 100.0	    30	....................................	TTTATTATCATTATTCTTCTTCCCAAGCGT	
   1136956	    36	 100.0	    30	....................................	TTTTATAGAATTTGGTGGTGAACTTTTTCA	
   1136890	    36	 100.0	    30	....................................	AATGGGTCACAGATTGCCATAATAAGGAGG	
   1136824	    36	 100.0	    30	....................................	CCGAGGTCACTTTAGAACCCACAAAATAAG	
   1136758	    36	 100.0	    30	....................................	ATGAGAGAACACAGTATAGACCCTGATACA	
   1136692	    36	 100.0	    29	....................................	CGTGCCATTGTTTCGGTCGGACGTGGGCA 	
   1136627	    36	  94.4	     0	..................................GT	|                             	
==========	======	======	======	====================================	==============================	==================
        12	    36	  99.5	    30	GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC	                              	       

# Left flank :   ATTGATGGCTTTATCTCAGAAGAATCTTATACTATTTTTTATAGGCAAATCTGTCATCTGGTCAAGAAGTATCCAAATCTAACCTTTATTTTGTTTCCTAGTGACCAAGGCTATTTAAAAATTGATGAAGAAAATAGTAGGTTCGTCAATATTTTATCTGACCAGGTGGAACATTTGTATGATGTTGAGTTTATGTATGAAAGGGTAATGAAATATTATCCAAGTAATGATTTTCCGACGAGAGAAGGTTTTAGGATGTCTTTAGAAACTGTGACACCTTATTTATTGACAAAAATGCTGAGACAACCTAGTCTCTCACTTGTTGATTCAGTAATATTGAATATCCTAAATCAGCTGTTTCATTTTAGTTACCGTATAAGATGTTCTCAGACACCTGATAAGGAACTATTACAGAAATTTTTAGAAAGTAAGGATTGACAAGGACAGTTATTGATTTTATAATCACTATGTGGGTATGAAAATCTCAAAAATCATTTGAG
# Right flank :  TTGATTCAACATAAAAAGCCAGTTCAATTGAACTTGGCTTTTTAAAATACACGATAAACATAAGGATTGTCAGGCTGACTAACCTCTTTAATCTCAGTCAAATTAAGGATAGGGAGGCTCTGTTTAAGGTTTTGATAATAATTCACAGTGATGGTACCAGTGACTGTTACCCAGGTATTATCCTTAAAGGTTTGGTCGCTTCCTGTCGTTGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATACCGAAACGGAAGATGAACTGATATCCCTTGGTCTGTGGATCATTGTAAACAAAGCCGGTATAGGTGACCTTCTTGCCCACGAAATCGTTTGGATAGAGATAGATGAGCTCCATGACTTCCATGTAATTTTCCGTGGTAATCTGGATGGTCTCACATCCCTTGTACTTGGCTAGCTCCTTGGTCATTTCCTTCTCATAAGCTGATGAGGTGAAGTAGGAGCTGGTGTCCGGCCTTAAGTACTGGGTAGT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.20,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.91   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//