Array 1 6684-8367 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALUV01000234.1 Streptococcus agalactiae GB00947 ctg7180000003405, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6684 36 100.0 28 .................................... GTCTTCAGGTGTTATTCTTGGGTCTTCT 6748 36 100.0 30 .................................... AATTTAAAATCTTCATCTTCTATACGTTTG 6814 36 100.0 30 .................................... TTGGAAAAAACACGAAAGTGATATTACTTT 6880 36 100.0 30 .................................... TAAGAATTTTAGATACTCTACTTGAATGCT 6946 36 100.0 30 .................................... TAAGAATTTTAGATACTCTACTTGAATGCT 7012 36 100.0 30 .................................... AAGACTTAAAATCGATTAGAATTGATTTTA 7078 36 100.0 30 .................................... CCAGTTTAGAAACAGAACAAAACTAACGAA 7144 36 100.0 30 .................................... AGACAAAGAAGATGGCAAGTCTATCAACAA 7210 36 100.0 30 .................................... AGTAGAAACATAACGATAATTCCATGAATA 7276 36 100.0 30 .................................... ATGTTGTAGAATCATATCGACCATATAACC 7342 36 100.0 30 .................................... GCTTGGTCTCGAAGAATTACAGAAGAACAT 7408 36 100.0 30 .................................... CAATTGATTGCCGTTAAAACCGATAGAGGA 7474 36 100.0 30 .................................... AAATTGCTCTATCAGTCAATAAAGCAAGAT 7540 36 100.0 30 .................................... TCATATTGAGTGGTTGTTTAATTAAATTGA 7606 36 100.0 30 .................................... TGAATTCCACGCCACCAAGTAAACCTGTGA 7672 36 100.0 30 .................................... ACAAGAAACAAACAGCCTTGATGACTTAAT 7738 36 100.0 30 .................................... AAAAAGCAATGGAAGCTAACGAGATTGCTA 7804 36 100.0 30 .................................... CAACCCTATGTTTGATAATATTTTAGACGT 7870 36 100.0 30 .................................... AAGTGAAGTTGAATTTTATTTGAGATACTA 7936 36 100.0 30 .................................... TAATACTTTTACAATATGTGTTTTCACTAC 8002 36 100.0 30 .................................... AAGTGCCACAGTTTGTGGCTGATTGGATTG 8068 36 100.0 30 .................................... CATTCAAGGACTACCCTCAACAGTAACTCT 8134 36 100.0 30 .................................... TTCTATCTTCTGAAGATATTTCACAAGTGA 8200 36 100.0 30 .................................... TCAGCGAGATGCTCTAAGTAAGCATGTTGA 8266 36 100.0 30 .................................... TCTTCTTTTTAATTCTTCTAACACTCCATC 8332 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CATCTTCTTTTGACCTAACAAAAGGATATGTGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGCTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //