Array 1 191847-194998 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYDZ01000004.1 Acinetobacter baumannii strain SGH0606 SGH0606.fasta_4_length_307342_cov_30.201230, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 191847 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 191907 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 191967 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 192027 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 192087 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 192147 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 192207 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 192267 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 192327 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 192387 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 192447 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 192507 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 192567 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 192627 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 192687 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 192747 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 192807 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 192867 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 192927 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 192987 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 193047 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 193107 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 193167 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 193227 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 193287 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 193347 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 193407 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 193467 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 193527 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 193587 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 193647 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 193707 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 193767 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 193827 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 193887 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 193947 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 194008 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 194068 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 194128 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 194188 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 194248 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 194308 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 194368 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 194428 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 194489 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 194549 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 194609 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 194669 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 194729 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 194789 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 194849 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 194909 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 194969 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //