Array 1 422281-424901 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXMH01000003.1 Chitinophaga alhagiae strain T22 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 422281 46 100.0 29 .............................................. ACGTAGGCGGCGTGGTTCTTTCTCCAACA 422356 46 100.0 29 .............................................. CCCCTTTACGCCGGGCGGGCGTTGTTTAA 422431 46 100.0 30 .............................................. CGGCCACCGCATAACCAGCCCTATGCTTTT 422507 46 100.0 30 .............................................. ATGATGCTGACAATGGTTTCTACCGGTACC 422583 46 100.0 30 .............................................. TGCTGGCGCTGATAGGAGTAGCGGTAAAAC 422659 46 100.0 30 .............................................. CACACGACCTGACAAAAAAGGTAGTGTCGT 422735 46 100.0 29 .............................................. AACATAGTGATTGTCAATGAACGGAGGTA 422810 46 100.0 30 .............................................. TGCTGATGCCTATAAGCACATCCTTCTGAA 422886 46 100.0 30 .............................................. CTGCAGCTTCCTGCTCCTGCTTACGGCGCG 422962 46 100.0 30 .............................................. TGTGGCTGTCGGCTTACGCTCTAACACCTT 423038 46 100.0 29 .............................................. AGACATGTGGCAGTACTCGGGTGCTGCCC 423113 46 100.0 30 .............................................. AAGGACGTGCGGCCAGCCCCTTACGCTTTA 423189 46 100.0 30 .............................................. CCATGCGTCACGCGGTACCTTCAGCGCAGT 423265 46 100.0 30 .............................................. CGTTACCTCAATCGGAACGTTCGCCTCCGC 423341 46 100.0 30 .............................................. AATCAGCTATTTGCTTTTCTATCTTTGAAT 423417 46 100.0 29 .............................................. TATTTCGGCATCAAGTTCCCGATCGGTCA 423492 46 100.0 30 .............................................. CGAAAATTCAGAAAAGGCTATGCAGGACAT 423568 46 100.0 30 .............................................. GCCTTTTAAATTTATAGTGTGAAACCTTTA 423644 46 100.0 30 .............................................. TGAGAACGATGAAGGCTTCCAGCATTTTGC 423720 46 100.0 30 .............................................. TGCGTCACTGTAGCGCTGCGGGCTGAAGGG 423796 46 100.0 30 .............................................. TTACCATTCCACGGGCCATTTTCAATGCAG 423872 46 100.0 29 .............................................. CATATCACCGCTGTTTTCCCTTCGTTCCT 423947 46 100.0 29 .............................................. CCGTGTCCGTAGCGGGTGCGGTTTTAACT 424022 46 100.0 29 .............................................. GTTTTCTTTGTAATTCACGATAAAATTCC 424097 46 100.0 29 .............................................. GCAGCTTCACTGTGGCTGATCTTTTCTTT 424172 46 100.0 30 .............................................. CGGATATATCGGTTAAAAACCTCTGTTGCC 424248 46 100.0 30 .............................................. GAGTCCGGCGATACTGAACGACTGGCAGGG 424324 46 100.0 30 .............................................. CGCCATTTTTCGGCTTCTTTTTTAGCACCT 424400 46 100.0 30 .............................................. CCAAACGGAGGTGTTGACGATGATCGTTAC 424476 46 100.0 30 .............................................. CTACCGGTGTAGAGGCATTTATACCTGATT 424552 46 100.0 30 .............................................. AATCCTTTTTCAACTATGAGAAAAATTTTT 424628 46 100.0 30 .............................................. TCACCGGCGCTATTGTTAAACTTCGTACTA 424704 46 100.0 30 .............................................. CCTGGTAGTAGGATTTGTCCAGGGCAAATT 424780 46 97.8 30 ......................A....................... TGCATTCACATTCACTATTGGAATGTTTCA 424856 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 35 46 99.9 30 GTTGTGAAAGACCTAAGGTACTGAATAATTGAAAGCAAGTCACAAC # Left flank : CGGACTACCTCCTCTCTGTCCAAATGCTTCGAAGGTAGTTCCCGGAAAATACTGTATCCCGAACTTACACATTAATGTTTAACCGTTTAAACGCATACCGGGTTATGTGGGTACTTGTATTCTTCGATTTGCCCACCGAAACAAAAAAAGACCGGAAGATCTATGCCCAATTCAGAAAGCAAATCCTGGCCGACGGTTTCCAAATGTTCCAATTCAGTATTTATCTGCGTCATTGCAGCAGCAGGGAAAATGCTGACGTACATACCAAAAGGGTGAAAAAGATCCTGCCACCCAAGGGTCACGTTGGCATATTGACGGTTACAGACAAACAATTTGGGATGATAGAACTATTCCATGGCAGGGAACCAGCCGTTGCAATACCCCCTCCGCAACAACTGGAACTCTTCTGATAGGAATAAAAAAAACAGGACATTTGCCTGTTTTTTTTATTCCTAAAAAGTTCAGTAAGCAGGCCATAGGCCTTCACTTCAGAGGAATCT # Right flank : CTCCTCTCATGGCCGAAGCTGGCCCAAAATTGTATCTCGTCCCACTGGCTCATGATGGCAAATTACTAAATTTTTTAGTGCTTCAAGCCAAAAAGAACCGCCCTACTGGACGGTGCTTGAGCCGGGACCTTCATACGCCGCCGGCTGCGTATCGATAACGCAGTGTGAAGATTGGTAGGCAGTGCGCAGGCTATTTGCGCTCTAAATCTTGTTTCATCAACTCCTCTACCCGGCGTGACCAGGAGCGGCCATAGCGGGCATAGAAGGCTTCGTAAATGTCAGGAAGAACGGTAAGCGGCTTCTGAATGCGCCTTACCTCTACACGGGTGAGGCCGGGTTTATTTCCAGCACCTGGCCGTGCGCCGCCTCGGTTGTTTTTTTTATGTACCTTTGGCATGATAAGTCATTTTGTGACTTGTTTCAATGACGGGGCCGGGAGTGATTACCCGGCCTTTTTTTAAAGCAGTTGTGTCCATTTCCTGATAATGTTGTGAAAGACC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAAAGACCTAAGGTACTGAATAATTGAAAGCAAGTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.04%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA //