Array 1 862436-857476 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849655.1 Acinetobacter junii CIP 64.5 acLZZ-supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 862435 30 96.7 30 ............................G. TGGCAAGTTTTCAAACATATCAATATCAAG 862375 30 100.0 30 .............................. CGTTAAACAAATAGTACACACCGCTAAACA 862315 30 100.0 30 .............................. GAGTACAAACATTCCCATCTTCAACGAATA 862255 30 93.3 30 ............................AC TCGGAAATAAATTCTGAATGTTGTCCGTAT 862195 30 96.7 30 .............................G TAGCGCCGTGTTTGATAAGAATTGGTTTTC 862135 30 96.7 30 .............................A AAATATCGGGGTTGATGTTGAGGCCAGCTT 862075 30 93.3 30 ............................AC GGCGCAAGCGAGAACGTTAAGCGACTTGTC 862015 30 96.7 30 .............................G AGTACAAGGCGACGTACCCAACCGATGAGG 861955 30 100.0 30 .............................. GAAAAGCAGCTAAACATGACTGCTTTCATC 861895 30 93.3 30 ............................CG TGGAATGCGTGACATGCAGGAGGACATCAA 861835 30 96.7 30 .............................G ATCGTGCGGATGAGGTTGTAACTGGTTCGA 861775 30 100.0 30 .............................. CCACTGGAAATGATGATCAATGCCGTAACA 861715 30 96.7 30 .............................G TATAGATAAGACACAACTAACCACATCACA 861655 30 100.0 30 .............................. TTCGCTACTCACCTGTTGTCGATTCCTTTA 861595 30 93.3 31 ............................AC GTACCTTCAAATACAGAATACCCGTTTGTCG 861534 30 96.7 30 ............................A. TTCCAAATAGCACGTTGCCTGAGTTCATCT 861474 30 96.7 30 .............................A ACACCGCAATCGTATGTTGCAGCAGGTAAA 861414 30 96.7 30 .............................G AATACAGCACCCCAACAGGTGAAACTATTC 861354 30 96.7 30 .............................A CATGCGCGACAACACTTCAATTCAGATGAT 861294 30 96.7 30 ............................A. TAGGTGAGAAGTGGCATGCGGACCATTTGG 861234 30 96.7 30 ............................A. TACGAGTGCAAATTCTTTCCAAGGGTTAAT 861174 30 93.3 30 ............................GC AAAAGCTCGCATCAATCGTGATCAAGTAAA 861114 30 93.3 30 ............................GA AAGGCGGTTTTTTATTGCGTGGAGAAAAGT 861054 30 100.0 30 .............................. TCAATAATGCAATCGACTGATATGCAATAC 860994 30 100.0 30 .............................. GTGAACGCGTTTAGAACGCGCCACAGGTTT 860934 30 96.7 30 .............................C AAACAAGATAGATTCGGACTTGGCGCATTT 860874 30 96.7 30 ............................A. ATTTGGAGCGAATCGAAGAAAGCGCACGAA 860814 30 93.3 30 ............................GA ATTTGAATAAAACAGCGTGTCAAAAATGGC 860754 30 93.3 30 ............................AC TGGGGTGGGCTGTTGCAACTTTTATTTTTC 860694 30 100.0 30 .............................. CAAGAGCATCGCATCACTGTCGTCATTCTC 860634 30 93.3 30 ............................AA CATGGGAATGTTGTGTACCACTTTATCAAT 860574 30 96.7 30 .............................G GTGTTAGACCTGGAACCAGGGATAAAAGCC 860514 30 96.7 30 .............................G ATTATTAGGAAAAGATATGAGCCATATCAT 860454 30 93.3 30 ............................AA TAACTGTTACGGACTGGTGGAATCGCTCAA 860394 30 96.7 30 .............................C ATTAGTTAAAGTAATTTCACCGCTTTAGCG 860334 30 96.7 30 ............................A. GAGAATACGCATGGCGTTCTTAGGATTACT 860274 30 96.7 30 ............................A. ACGGATAACACTGATCTACCAGTACAAGAA 860214 30 93.3 30 ............................AC CTCTTAGAACTTTTGCTACTTGGCTGACGT 860154 30 93.3 30 ............................CA ATCAACAGTGCCTAGCAATTGCTCTACTGC 860094 30 96.7 30 ............................C. AGCAATTGCTCTACTGCAATAGATAAAGCA 860034 30 100.0 30 .............................. GTAAGGGATTTGATAATAAAATTCATTGAT 859974 30 93.3 30 ............................GA CGACATCACAGATACTTCTGTATCTTTCTC 859914 30 93.3 30 ............................AG AGACTTCATTTGTGTATTCAATGACTTCTT 859854 30 96.7 30 ............................G. CTACAAAAATATGTCAATCGTGGTGCTGTT 859794 30 100.0 30 .............................. AAGGCTGCCCCAGTTGATGGCTCTCTATGT 859734 30 96.7 30 .............................A CGGTTGGTGCTGTCTCGAAAGTTCTTGCGC 859674 30 96.7 30 .............................G AGTATTGCGACAACGATGGAAAAATGTCAC 859614 30 96.7 31 .............................G ACAGGGAATACAAGGGTGATGATTTTGAAAT 859553 30 96.7 30 ............................A. AGACCAGACACAGACACATCACTATTTACA 859493 30 96.7 30 .............................G CTAACAATCAAATTGTCTATAAAACATCAT 859433 30 93.3 30 ............................AA TAGTTCTCTAATTTCTTGTTGTGAATAATA 859373 30 96.7 30 ............................C. GTGTTGTACATCGTTGCGAGAAATATTAAA 859313 30 96.7 30 .............................C ATTAACGGCCAAGCGTGGACACGAGAGCAG 859253 30 96.7 30 .............................C CTCCGCCACTTGGATGCGCGACATTTTATT 859193 30 93.3 30 ............................AG TGAGAGTTTCTTTTCTTGATCTTGTTCAGT 859133 30 96.7 30 ............................A. AAAAGCCCCGATTAATTGGAAAGGGGGCGA 859073 30 100.0 30 .............................. ATCAAGGACGCCTTAAGAAGTATTGCTCAT 859013 30 100.0 30 .............................. TGCTAGCTACACCCTTATTGATTAGATCAA 858953 30 96.7 30 ............................A. GATGTATACAATGTTACGCGCATCTGAGAT 858893 30 100.0 38 .............................. AACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAT 858825 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 858765 30 96.7 30 ............................A. CGAGCAATTGAACCTAGCATTTCCTCTGTA 858705 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 858645 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 858585 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 858525 30 100.0 30 .............................. TTAAGTATTCACGTTCAGCAATAGTTAAAT 858465 30 96.7 30 ............................G. GACGGAGAAGGGTGATGAAGAAATTAAACG 858405 30 93.3 30 ............................AA AATGCGAATTAACTACGGCAAGAAGTTCAT 858345 30 93.3 30 ............................AC CCGATAATGGCCGACCATTGTCGTCAAAGA 858285 30 93.3 30 ............................AA TTTGTCAGTGTCTGCGGCGACTCATCAATA 858225 30 93.3 30 ............................AA AATACTCACTCACTACTGCTGACAACGTAT 858165 30 96.7 30 .............................C GAAAGTCATGGGATCAGATTGGAAAGATGC 858105 30 96.7 30 ............................A. CGTCATAAGCATTTAATCGAATACCCTCAA 858045 30 96.7 30 ............................A. CTAGTGTTATTGGGTGGGTAAAACGATTTA 857985 30 96.7 30 .............................G TTTGACCTGAATCCAAAACCAAATTAAAAG 857925 30 96.7 30 ............................G. ACAGGCTAATGTTAAGCCATGTCGGGTGGG 857865 30 96.7 30 ............................A. TCGGGGGTGATGTGAGTAAGCAAAACGATA 857805 30 100.0 30 .............................. CACCCCGACTTTGTAATTTCCTCCGACATT 857745 30 96.7 30 .............................G ATTCAACGGGTGGCAAAAATAAAGCTGAAT 857685 30 100.0 30 .............................. ACAGCGCAGGGATGTGCTGCGGGTATAGTA 857625 30 93.3 30 ............................AG CAATTCATGGTATGGGTTTTATTAGCGAAT 857565 30 93.3 30 .............C..............A. AAAGCAATATTGACCAATAAAAGTAAGCGT 857505 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ====================================== ================== 83 30 96.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAA # Right flank : CATGTGATTTATTCATATGAGCCATTTAGAAATGTAACGGTCTTGATTGGCATTTGTTCTGTGTGTTCATTACGGAATTTATTTTAAGAATTAATAAGTGACTTATAATTCTTGTTCCAAAATTATCGTGTTATATGTCATTTAAAATACATAACATCAAGAAATATGATTCTTACTACATTCTAGATCTTTAATTTTTAAATAAGAAAATATACCCTGAAACTAACGTTTTTTTAGTGAAATTTTCATGCGTGGTTTATACCTCATCACCAATGATGATCCCATTCAGCTTCTTTTAGAAAAGTTAGAGGCTGCACTAGCTACTGGTCATATAGCTATTTTGCAATATCGTCGAAAAAAAATAGAAAAAATAAATCAACCATCTGAAGTGGAGTTGATCAAAGTCCTGAGTGAAAAATATCAAGTCCCTTTTGTCATTAATGATGATTTGGCGTTAGCAGAACAATTTGGTTTAGGTGTGCATCTAGGGCAGTCCGATG # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.24, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 870521-869231 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849655.1 Acinetobacter junii CIP 64.5 acLZZ-supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 870520 30 96.7 30 ............................A. TGGTGGTGCATGGCAGATGATTAAAGTAAG 870460 30 96.7 30 ............................A. GGGGGTATCTGATTTAATTGTGATTGGAAA 870400 30 96.7 30 .............................T TCCCGACAAAAGCCTGATCAATGTCAACTT 870340 30 96.7 30 .............................T TCGCGTATCTAGCCTTAGCCTTATCAGATA 870280 30 93.3 30 ............................GC CGTGAAAGGGCGACGCTCCAGAGTTCGATT 870220 30 100.0 30 .............................. TCACGTCGCTAGCGTGCGAGGACGAGGAGC 870160 30 96.7 30 .............................T ATTACTCTCACACAGCTAATGGCATGTGCT 870100 30 96.7 30 ............................A. TTGCAGTTCCAGTTGATAAATCCATTGGGA 870040 30 93.3 30 ............................AT CTGGGAGATCACGCCAATCGAAAGGCTTGT 869980 30 100.0 30 .............................. AAATATGGTGTGCCAGTCGGTAGGCTTTCC 869920 30 96.7 30 .............................C CCATTGTGATTGAGTGAGAGCATGGCTTTC 869860 30 100.0 30 .............................. GTGTTACTGACGTAGACGATGCGAATGCCC 869800 30 96.7 30 ............................A. CACCAATAGAATCATAAACGATTAGCGCGT 869740 30 93.3 30 ............................AC TCAAAGAGAATTCTATTTATAGAGGCAAGT 869680 30 100.0 30 .............................. CCCAGTATTCAAGTACTGGCATGGCAGCTG 869620 30 100.0 30 .............................. GACAAAACCTGATATTTGATCCAAAGCAAA 869560 30 93.3 30 ............................GC CACAAAGAGCGAAACGCCCATGCAAGGTGA 869500 30 96.7 30 ............................A. TAAAAGAACGCGCTCCTGATGTTTTACCAT 869440 30 96.7 30 .............................G AAAAGATTGAAGTTGAAATCATGGTTAAAG 869380 30 96.7 30 .............................T TGGCTGTTGATACGGGGCAAGGGGGTAGTA 869320 30 96.7 30 .............................T TGGGTGAAGTTGCAGAAAATGGTGTGCTCC 869260 30 93.3 0 ............................AG | ========== ====== ====== ====== ============================== ============================== ================== 22 30 96.7 30 GTTCATGGCGGCATACGCCATTTAGAAATA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTATGGTTCATGGCGGCATACGCCATTTAGAAATTTCAGTCCATAGTTAGGGTGGTTTTTACCAC # Right flank : TCGCATTAGCATTTGTGGCCAATAACATTCGTTCATGGCGGCATACGCCATTTAGAAAGATCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGGGTTCATGGCGGCATACGCCATTTAGAAAACGTATATTTTCCGCTTGCCACACCAGAACATGTTCATGGCGGCATACGCCATTTAGAAATGACTCCAAAAAGTTTTTTGCAATTTGCTCTGGTTCATGGCGGCATACGCCATTTAGAAAGTTGAACTCTACAACATCAAACGCTTTTTAATGTTCATGGCGGCATACGCCATTTAGAAAACGCACAGAAGGGATCAGAATGTCCCATGAGGGTTCATGGCGGCATACGCCATTTAGAAACGAGTAAAAAGAGTTAAAGGAGATAGTAGTGCGTTCATGGCGGCATACGCCATTTAGAAATTCGTTAAACTGACTAGGTTTTGCTTTTTCGAG # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 872893-872323 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849655.1 Acinetobacter junii CIP 64.5 acLZZ-supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 872892 30 93.3 30 ............................AG TCAAACCAATCAGATACTTTTTGCCAAAAT 872832 30 93.3 30 ............................AA GTGGGAAACCATCTGCGTTGTATGTAGCAA 872772 30 96.7 30 .............................G TAGATTGAAGAATTGTATTGTCGTAATTGG 872712 30 96.7 30 ............................A. TAAAAGAACCGCTTACATAGCCTGAGCCGC 872652 30 96.7 30 ............................A. AATGAATCGCTAAGAGACTCTAAGCCAATT 872592 30 100.0 30 .............................. GCGACCCCTGCGCACAGCTTCGGGGACTCG 872532 30 96.7 30 .............................G ATCCAGATACACCTGACGACCCTAATAACT 872472 30 93.3 30 ............................AC AACCAAAAACAACATAAGTCTATATATATC 872412 30 100.0 30 .............................. GAGGTGTTGTTCTCCAGTCGCAGTCTGGAG 872352 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================== ================== 10 30 96.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGTAAATGGCTAGAACGATTCATTGATTATGTTCATATCATTCAACCGAGAGAAGTACCTCAAGCTAAAGTTACTGGTCATGCACACTATTATCGAGTCAATCCAAAGATGGGGATTGAGGAACGTATAGTTCATCAAGCGCAACGTCGAAAAATTTCTTTGGATGAAGCTAAGCAACATTTTAAACAATATATTGAACAACCTATCATTGAGCCTTATGTGAGTTTAAAAAGTCTGAGTGCTAAACGAGAACAAAATATAGATCGACCATATCGTTTATATATTGGTAAATCTCTTGTTGATGAGGCAAAAGATGGAGAGTTTGGAACGTATGGACTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTACTCTTTAACAGCTCAATAAAATCAATAAGTTACACCAAGTCATTTTTTGGTTGGGTAAATTGCTAAAAACCATCATAAATACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //