Array 1 824519-824266 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009526.1 Methanosarcina barkeri str. Wiesmoor chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 824518 37 70.3 35 G.CGAGAG.T.GCT....................... TTTGCATTTCCTCCTTTTCGAAGAAATTTTTCCTG 824446 37 83.8 37 .G...A...GT..T......................T CAAGATAATATCTGTTCATTTCTTCCTCCTAATAACC C [824433] 824371 37 100.0 32 ..................................... TCGATAGGGTTGAGACAGATGAAAATTGAGAG 824302 37 97.3 0 ........................A............ | ========== ====== ====== ====== ===================================== ===================================== ================== 4 37 87.8 35 ATTCGCGAGCAAGATCCACTAAAATAAGGATTGAAAC # Left flank : ACCAGTTCGGTTACGGCCGTGATGCATTTTGCCTTTGAAGAAATGAATATCAACCGGGTTCAAATTAGATGTGCGGTGGGGAACTTCCCCAGCAAAGGCATACCTCAACGCCTCGGATTCCATTTTGAAGGTATTGAACGGGATGGAGAACTGCTAACCGGGGACCGTTTCACCGATATTGAGGTGTATAGCCTGCTGAAAAACGAATTTCTCTCCGCCGGTCATTAGAAACAAAACATGAAACCTTCGGCCGTTTTCACATGATTCGTAATACAATGACTTATCCCGGAAGCAACGAAACAAAAATAGATGCATGGGTGGATGAAATAAAGCTATACGGACATGGTCCTGAAAATTTTAGCAGGTTTTTTAAAATTATATCGCTCAAGTAAAAAATAGCCGCTTAATATGGCCGCTTAATGTAGTCGCTTAATACTGTTTTTCAGAGTTGAAGTTACCTGAGGATTTGCTGTAAATAAGGGAAAACGACCCTGTAGACT # Right flank : AGGGATGTTTTGAGTTTTGTGGGGTGTCTGGAAAAATGATACATATGTTGATATTCTGTTATAACATATTATAATATATGTCTACTATAGCCATTGATCCAGATGTAAAGAAATCACTTAAAGAATTTAAGATCACAGAAAACGAGTCTTATAATTCCATTATCAAACGGCTCATTGTTAAAGTTAAAGAAACTGCAGAGTATAAACCAATGTTCCCAAAAGAAGAGAACACTGAACGAAGAGAATCACATGTCAAAGATTTCGATGCATGGTTGGATAGGAAACTCATAGAAGACAAAGAGATCTTAGACGCACTCGGAAGAAAGTGATATGTTGATTAGCTTAATTGACGTCTTAAAAATTCATCAACGAGTAATTGACTATGACAAAGAAGAGAATCCTGCCGATTATACACCTGCAATTAGATCTCTTGCTACATTAGAGTTACTGTTTGAATATATGATAAAGGAATCTAATACCGTTTTTCAAAATGCTGCAAT # Questionable array : NO Score: 6.45 # Score Detail : 1:0, 2:3, 3:3, 4:0.40, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCGCGAGCAAGATCCACTAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: R [matched GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 834573-831230 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009526.1 Methanosarcina barkeri str. Wiesmoor chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 834572 30 100.0 35 .............................. TGAACTTGAAATTCAGGACTGGCTAGCAAAAGAAA 834507 30 100.0 36 .............................. GTTGAATCAAAAATATATCCAGCAAGTATTGTCCTT 834441 30 100.0 37 .............................. GTAATAGTAAAATATAATCTATCATTTGATCTCGAAC 834374 30 100.0 38 .............................. AATGCAAGATATGATCATACAGGCGGACCTGATTTAGT 834306 30 100.0 36 .............................. CCGCATGGAGAGAAACAGACGGAATCCACGCAAAAG 834240 30 100.0 35 .............................. TGTGTCTATAACTGATATTCTTAATGCAAACGATA 834175 30 100.0 37 .............................. TATTCTGAGTCTGGATATCCCGAACTCCCAAAATACT 834108 30 100.0 37 .............................. AATCTAGGAGTCTTAATCTTTCATCAAGAAGCCCCTT 834041 30 100.0 36 .............................. ATTGGAAGCAGCTAGTCGGGGTTGCCTGCGGGTCTG 833975 30 100.0 36 .............................. CTGTCAAAACTCGATGCACAGACACCTGTTAGTATC 833909 30 100.0 36 .............................. CTTTTTTGGAGCAACACATATGAACCTTAAAAATAT 833843 30 100.0 37 .............................. TATCCTGGACATAGACACGAAGCAGTATGGATAAGAG 833776 30 100.0 38 .............................. ATCAATATATAATAATTCCTAGAATTATAAGTATAAAT 833708 30 100.0 35 .............................. GAATGTGACGGATGTGAAACAATACGGGTGGGAAA 833643 30 100.0 38 .............................. TTTAGGAATAATCTTCTTAGTTCCCGAGTACAACACGT 833575 30 100.0 36 .............................. GAGTTCAACCGGTGACCGGCGGAGCAATTGAAAAAT 833509 30 100.0 35 .............................. TATAATTCTAACAATTGTACGGATTTAAAAAATTG 833444 30 100.0 35 .............................. TCAGCTACCGAAGGATTTCAAGGGGTTTTTACTCT 833379 30 100.0 35 .............................. ATCAAATCCACTTTTTATATAAGCATCTTTTACGA 833314 30 100.0 37 .............................. CTAACTAAGTATTCAAGGAATGCTGGAGGATTAGGAT 833247 30 100.0 36 .............................. GTTTAATTGGCTCCCAGCAGTCACACCCATAGCAGT 833181 30 100.0 35 .............................. GAGGATTAGGATGATTGGCAATAAAACTAAACTTT 833116 30 100.0 36 .............................. AATGATGATTTTAGTGGAGTGTTTGGTCTTAAGTCG 833050 30 100.0 36 .............................. TTGATTCATGGGATATCGGAGGGACGAGCAATGCAG 832984 30 100.0 38 .............................. CATATAAAGAAAGTAAATAAGAAACTCATGAATTATAA 832916 30 100.0 35 .............................. AATTTAGGTGATCCTGTTCTACTGGTTCCTGTGTT 832851 30 100.0 36 .............................. GAATCTGTGAATTTAATATCTAAAATGTCAAATATG 832785 30 100.0 36 .............................. GTGCTCTTCTTTAACCCCAACTTGAAATTTTATATA 832719 30 100.0 35 .............................. ATAAAAACAAAAACGATTGTCTGTCTAAGCTATAC 832654 30 100.0 35 .............................. GTGTATGTTTCTGACAGCTCAATAATAGTTAGATA 832589 30 100.0 37 .............................. AGATATTCTTTTTGAAGCCCTTTAAAATCTATAAGTT 832522 30 100.0 37 .............................. TTAGTTATAAACCATTTATAGACACAGTAGCAGCACT 832455 30 100.0 36 .............................. ATTGCAATATCGAGAATATCTTTTACGGAAATTGCA 832389 30 100.0 36 .............................. ATATTCGGATGGAAAACACTCCCTTGGTGTGAAACA 832323 30 100.0 37 .............................. CCTCAAGTTCTCCATCGCTTCAACGAATAGATATCAA 832256 30 100.0 35 .............................. GCATAATACAAAGTACTGTTACTCATTCCGCTCTG 832191 30 100.0 36 .............................. CACGTAACTTTCAAGGACATGATATCTTGTAGAAAC 832125 30 100.0 36 .............................. ACGACTACGGCTAAAGTATTTGCTTCAGCAGTTGGG 832059 30 100.0 36 .............................. ATCAAATGGCGGTATTCAGAAAATCTGTATGGAAAT 831993 30 100.0 36 .............................. GCAATTTCCAAGGTTTCCATTTGGAAATGCAAAAAA 831927 30 100.0 35 .............................. TTATGAGCATCATTATCATGTTTCCGCTTTTTAGC 831862 30 100.0 35 .............................. GGGTAAGATTAAGTCCATGGATAATCGAAGAAGAC 831797 30 100.0 36 .............................. AATCTCAGTCTGTAGGGTATGGGGCAACCTGCTTAA 831731 30 100.0 38 .............................. GCTTCTCTGTTTGATCCAGAAGGGATATTCATTTTTTC 831663 30 96.7 35 .......................C...... GTTTCACCAAAGAAAATCTCTTTCATTTTCTTAGT 831598 30 100.0 37 .............................. AATCTTCAAATGGCGCTGCTGGCATGATATCCTCACA 831531 30 100.0 36 .............................. ATATAATCTCTACAAATTTTCGTCATATATCCTTGC 831465 30 100.0 39 .............................. AAAAACTATGAAAACCAAAAGGCGGGGCATTTAAAACTG 831396 30 100.0 38 .............................. ATGTTCACCATCCCATTTCTGATTAAAACAAGTTTCCG 831328 30 100.0 39 .............................. AAGAGAAATTTTAGGAATACGGCGGCTGGATAATGAAGC 831259 30 93.3 0 ............T....T............ | ========== ====== ====== ====== ============================== ======================================= ================== 51 30 99.8 36 GTTAAAATCAGGCCTTAGAGGGATTGAAAC # Left flank : TGAATTGGGTCCAGAACAGTGTATTTGAAGGCGAACTTACAAAAGCCGAACTCCTTAAAGTTAAGTCTACGCTTAAGGAGCTAATTAACGAGACTTCGGACCACATTATATTCTACAGCTCAAGAGATAAAAAGTACCTTGGGATTGAAAACCTTGGAACTCCAAAAGCGGATATCAGCAACATTATTTAGGCCTTGATACTTGCAAATCTCCTATATTGAGACTACACGCTAAATCAAAAACTTATTTTATATATTTCTTTTTGATATTCGCTCTGCTGATTATTAATTGTATTTTCTTTCGGGGATCTTTATATACACTTTCCCAGAAGAACAATCCCCGAATTCCCATGTTGAATCTGTCCTAAAAAACAGATACTTTTATATCTTACCGTATGTAACTATTCTCACATAAAAACAGCAATATAAGCCCGAATTTTACTCTTTTTAGAGATAGGATTTAGCATCCAATTTATCTGAAATTCGGGGAAAATTTCCTTG # Right flank : AACGACTCTTTTTAAGAAATATTTAACTCTTTCTATTTGATGAAAAAGGGAAGTTACTTATTAAAGACTTTCTATATTTTTATAAGATTTTTCCTTTTGTAATTAAAGTTGATTTTTCTAGAATTGGAAGTAAAATAATGAGTCAAAGCTTTCTTTATACATTTACTGGAAATCCTTTTGTAGACTCTGGGATCTGGGCTATATGCGAGTGGTCAGGCAGAAAAAAGCCTGAAGATATAAAAATTGAAGATGTAAAGAAGATAGCACATGATGTAATCCCTATATATTTGAGTCTGAAATGGTCAAAGAGTCTTTATTCGGTTTTTCCGAATAATGCGGTTACCAATCCTTCTGTGAAAAATAAAGATAAAAAGCTGCTTGAGTCTTTAGAGAAGTTAATCGGTCAGGTTGAGTCCCTGGAGAAATCAGAGAAATCGGGGAACTGTATCTCTTGTGGAAAATATAATGTAGAGCAAACCAGGACGAAAACAGAAATTCCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGGCCTTAGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 3 2018234-2020007 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009526.1 Methanosarcina barkeri str. Wiesmoor chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 2018234 36 100.0 39 .................................... ACAGTATGGGCATTCACATGTTGTGTACTGTCTCGTCTC 2018309 36 100.0 39 .................................... AAGGTGCCCTGTTGTTGGGTGGATTTTTGTTTTTAGTAT 2018384 36 100.0 36 .................................... CTCCCCAGCGAAGACTGGCCCGTTTTCAAAACTTCC 2018456 36 100.0 36 .................................... CATGGGTTCGGCTGCGATGCGAAGGAAGGAGAGAAG 2018528 36 100.0 36 .................................... GCTAGAGTTGGTCAAGAAGGTGAACCTTTAACGCCA 2018600 36 100.0 37 .................................... TTGTGGGTAATGTGGGAAAAGGTTTACTTCAAAACCC 2018673 36 100.0 35 .................................... CAACTGCAGGCAATTATACAGATGGTCTTTTACAA 2018744 36 100.0 36 .................................... AGCCCGACCACATGTTTACTGACATTCCCATATAAA 2018816 36 100.0 37 .................................... CATTGTATGATACGATTGCAGAAAAATATACTGATGA 2018889 36 100.0 37 .................................... AGATTATTTTGAAACTTCTTTGGTATCACAGAAAGGT 2018962 36 100.0 35 .................................... CTTCCCAACCGAGTACACCAACAACAGCCGTTCCA 2019033 36 100.0 38 .................................... TATTATCGAACGATACAGAGCCTGTTTGAGAAAGCGCA 2019107 36 100.0 37 .................................... CCAACTGCCAGAATCCTGGTTGGTATCGTCGACCTCT 2019180 36 100.0 37 .................................... GTATGCCTGTGCACCCTTTGACTCTGGCTTATACTGA 2019253 36 100.0 36 .................................... AAGATTGGGGGAATCCTAATAAAATAAAATGGCCGA 2019325 36 100.0 36 .................................... CAGATTTTAAAAGTTCGGGAGTAATCGAAGGATCGA 2019397 36 100.0 37 .................................... TTAGTTGGGGAAAGTCTCACTACTGCGGGATTTGTAC 2019470 36 100.0 37 .................................... GTATCAAAAACGGTGGTTAGTAATTGAATCATAACAT 2019543 36 97.2 37 ................A................... TTACAGTTACACTGGCGACCATTCGAATGGTGCTTAT 2019616 36 100.0 37 .................................... TTTTTTTAGCGGTTTTATAAGCGTCCTGTAGCTTCTC 2019689 36 97.2 36 .................A.................. CTAAACTAGCTGTACCATTACCAGATCGTACAGAAA 2019761 36 100.0 36 .................................... GAGCTTTGACATCAGCAACAGAACACAAGACCATGA 2019833 36 91.7 34 ................A.........T..G...... CTATTAATAGAATCAGCTACAACTAAACAGATTA 2019903 36 86.1 32 ...C......T.....A........T.........T TTGTAATAGGAAAGTAACATAATAGCTGAAGA A [2019908] 2019972 36 83.3 0 .C.....C..T..G....................AT | ========== ====== ====== ====== ==================================== ======================================= ================== 25 36 98.2 36 GTTTCCATAACCGAAAGGTTGTGGCAGAATTGAAGC # Left flank : CAGAAAAATTTCATATAAAACTAAAAGGGGAAATATGTCAGGATTAAACTGTTACATCGTGAGTTATGACATCAAAGAGCCAACTAGATTAAGACAAGTGCACAACACTGTTGAAGGATTTGGGTCTCCACTTCACTATTCAGTCTTTCGTTGTGACCTTTCAAAAAAAAGCAAAGTGGAACTCATTGCAGCGCTTACCGATATAATAAATTCTGATGAAGACAGTGTAATGATAATAAATTTGGGCCCAGCGAACAAAAACCTTGATAAGAAGATAACTTTCATAGGTCAGAAACCTGAAGTTGAAGAGGAAGATTTCATTATTGTTTAATTTTCGAGAGCTTATGAACCCTAAAAACTGCTGAAGGCTCTCGAGAAGCTTCAGCTTTTATAATTGAGATAAATATGCTAGTTTTATAATCCATGAAAAGAATTCAATTCAATGATCTCTCGAAAACAAAGTGAATTCCGTAGCTAATAGACGTGAAGATCTTAGCGCC # Right flank : TATTGACGAAAATACTAAAGAAAATTGGCGAGTTGTTGGAAAATTTATATCAGTTGCTGTCACCGCGTGATAACCAAAATATATAGATATATGAGGATGATTTTCCATCGTCAATGACCTATCTAAATGAGTACATCCATGTTGATATGCGATTATTTGAGTGCAGTCATTCTGACAAAAACGTTATCATGAGTGTGTCTAACTAAAAAATGATATCGCTATATATGAAAATTATTTACGGTGATAACGAATCTTCAAGTTCTATCGATCATACGGCTCTCGTAGCTGTTTTCGTACATATTTAGGGTCCTTCCAAATCAGTACTAAAACTAAGGGTATACAATGCTTATTTTGGATAATAGATATGCATTTAGAGTTTCCCCAATTAAGGTACACTCTAAAAATCAATTTTTTAGATAAATAATTTATAATACTCTTTTAAATCAAGAAGAGGGCGAGATAAATACTTTATTTTTTTACAATTTATGTTTATTTATAAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATAACCGAAAGGTTGTGGCAGAATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.00,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 4 4404901-4403521 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009526.1 Methanosarcina barkeri str. Wiesmoor chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================================================== ================== 4404900 37 100.0 34 ..................................... TCGATTCATTTAGGATGTACTACGGCATACATAA 4404829 37 100.0 31 ..................................... CCGGTATGTCTATCCTATCACCTTTTTTAAG 4404761 37 100.0 46 ..................................... CAGTCATCTTTTACACATCCTATTTTCATCAATTGTTTGCTTTGGC 4404678 37 100.0 34 ..................................... GATATTACGAGTAAAAGGAGAAAACAAAGATCAA 4404607 37 100.0 35 ..................................... AACTATACGCGAGGGAGAGGTACATAGAGTATATT 4404535 37 100.0 36 ..................................... GACAACGCAGATGAAGCAAAAGCTTACGTAATCCCA 4404462 37 100.0 37 ..................................... CGAGAACATAAATTCCGGTAGCATCCTTTTTTGTAAT 4404388 37 100.0 37 ..................................... CTTTTTCAGCTACTTTATCTGGAAGATCTTTTAGAGT 4404314 37 100.0 34 ..................................... GATATTACGAGTAAAAGGAGAAAACAAAGATCAA 4404243 37 100.0 34 ..................................... TAGGTATATATACATTGTTATCATTGTTGTCATT 4404172 37 100.0 35 ..................................... CCCAGGAGATAAAGAAGGGGAGGTACCAGAAGATG 4404100 37 100.0 36 ..................................... TTTGTTCATCAGATAATTTAACATATTCACAAAGTG 4404027 37 100.0 33 ..................................... TCTTTTTGACATTCAAAATCTGTTTGCAATCTA 4403957 37 100.0 34 ..................................... TCCATTTTTAAATAAACTGGAGGATCATACATTA 4403886 37 100.0 35 ..................................... TTAAGTTCACGTATAATTAGATACTTAGCTCTTTT 4403814 37 100.0 35 ..................................... TTCCGGAAAGTTACATCAGAAGAACCTCTGCAACG 4403742 37 100.0 36 ..................................... CTTACAAATGTGTCATTATGTGCTAAGGCTGTAAGG 4403669 37 100.0 75 ..................................... CTACAGCCTTTGGGCATACATTCCCAGAGAACTCGATTCGTGAGCAATGCTTTTTAAGTAAGTTGTGTATATACT 4403557 36 78.4 0 .....C..T.........A.....-.....A...TTG | A [4403524] ========== ====== ====== ====== ===================================== =========================================================================== ================== 19 37 98.9 38 ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC # Left flank : TACCTACCAGTAGTGTTTTCAGTAATCCCAAATCAGTTAAATAACACTTTTTTGAAAAAGCATAATAATACGGCAATACTTTTTTGACAAAAATTAAGATGAACAAGACTAGACCCGTTTTGCTATAAATACATTCCTAAATATATGTAATACTAATACAATAATTCTATAATATTAAATAATACAAAATAATATTTTTATTCGTTTGTTAGTTTTGGATTGAATTCAGTGTCTGGATGAATAAAATAGTTTAAATTCAGTGTTTTTAAAAAATAGTAAAACCATCATTGAATTAAGCCGGGCTTTAAATCTACTTAGAACGCTTTTAAATACAAAAGTTAAATAGAAAGAAAGGCATATATCAGAATGTTTCCAAACCGCTAGAAACCCTGTTTTTCTTGTATTTATAAAGGGTTTGATAATTTTCCAACAAGAATTTCAACTCCATAAAAGGACTCATTTCAGGCCTTTTCTAGCCAAATAACGGAAATTTTTGCCCT # Right flank : AAACTTTTTTATTTTTTACTAAGTATATCAGGCGATGGAAATGCTAGATTTCCTTAAAAATTTATTTGGTAGTAAAAATAATAATCAAACCCGAAGTAGTAAGCCAAAATATGGTAAGGCGTTTGGAGATAGAGTTATACACTGTAACGTGGCTCGCATATTTACCGGAAAAGTAACAAGTGTAGGTAAATGGGGTGATGATTACGAGAAAAGTTATAGGTATAATATAATATCGGGTAAAGTTAAAATTAGAAAGTTAAAAGCTATAACATTACATAGGAGCTGGGGTGGCACAATTAAGTTTTTTATGTTTTATCCTGTTACTGGATATGCAGAAATAGAAGCTGACGGTACAAGAATTATGTTACACAAATATAATGGATACGGAAAAAAGATGATTTATAAGCAGAAGTTAAGATTATGATTTTTACTTTTACTAAGAACCTATCCGAAAAATCCTGCTGCTCTGAATGTTATCCATGCACATGCGAAATGAAGCA # Questionable array : NO Score: 9.05 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA //