Array 1 46062-45057 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QOGR01000021.1 Escherichia coli strain AVC111 scaffold_20, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     46061	    29	 100.0	    32	.............................	GTGACCATAAGGGCATTTCATACTGCCTTGCT	
     46000	    29	 100.0	    32	.............................	GTGAACGTGACAACGCCCGCGACAGAAACGTC	
     45939	    29	 100.0	    32	.............................	GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC	
     45878	    29	 100.0	    32	.............................	AAATTAATTTCGAAACGGGCGTTGATGGTGAA	
     45817	    29	 100.0	    32	.............................	GCTGGCGCACCTTACGCAAAAATAGACGTAAA	
     45756	    29	 100.0	    32	.............................	CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG	
     45695	    29	 100.0	    32	.............................	GGGTTCTATTTCCTCGGGATTTGCCGACACGC	
     45634	    29	 100.0	    32	.............................	GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG	
     45573	    29	 100.0	    32	.............................	GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA	
     45512	    29	 100.0	    32	.............................	AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG	
     45451	    29	 100.0	    32	.............................	TTGGTATTAACGGGAATGTAGTCACTCCAGGA	
     45390	    29	 100.0	    32	.............................	GCGATCGTATTTTCCGCTACGTCGCTCAAATG	
     45329	    29	 100.0	    32	.............................	CAGGGTAACTGGCTGCTCCTCAACCATTCCGC	
     45268	    29	  96.6	    32	........C....................	GGGTTTTAGCGACCGGACCAGAGTACGCAACA	
     45207	    29	  96.6	    32	........C....................	TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT	
     45146	    29	  96.6	    32	........C....................	GGAGTGATGAATTGGAAGTAACGGATAACCGC	
     45085	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        17	    29	  99.4	    32	GTGTTCCCTGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT
# Right flank :  GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCTGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-5.80,-11.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.14   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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