Array 1 261337-264291 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFCMR010000003.1 Klebsiella pneumoniae strain 1503e NODE_3_length_446841_cov_17.950570, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 261337 29 100.0 32 ............................. AAACCCCACTAGTCTTACCGTACTTGATTGCC 261398 29 100.0 32 ............................. GGGTTGCTGAAAATCTCGCATCACAGGCAAGC 261459 29 100.0 32 ............................. AACGTAACCTGATTCCAGTCTGCATTATAAAT 261520 29 100.0 32 ............................. GCCCGAACGCCGATACGAATTTATCCCGAGGA 261581 29 100.0 32 ............................. CCTAGCAGCTCTACGGCGTCTTTTTTGCCGCC 261642 29 100.0 33 ............................. CGCATAGTGACAATTGAGCACATTAGCGGCCAG 261704 29 100.0 32 ............................. ATAGCCGACAGTACGCCAATGCTGGTGGAGCC 261765 29 100.0 32 ............................. TTTTATGCTACTAAGAAATATATGACAAAATC 261826 29 100.0 32 ............................. GCGATTGGTGGACCAGTTTCCGCGGCGTTCCG 261887 29 100.0 32 ............................. GCTACCAGTTGCCCTTTCGTCGCACCGCTCAG 261948 29 100.0 32 ............................. GCGGACTTTACTGGAGATATACCGCGCCAGTA 262009 29 100.0 32 ............................. ACGGGTCTGACTCCAGAATCGCCGTAAATATC 262070 29 100.0 32 ............................. CAACCCACGGGGATCCGAAATCGCCTGCGGTG 262131 29 100.0 32 ............................. GCAGGCCTTGCATGAACTGATGACAGGCAAGC 262192 29 100.0 32 ............................. CGTGAGTTTATGGTTTCGGTTAGGGGAAATAA 262253 29 100.0 32 ............................. ACATTTTGGTGATCCGCATATGCGTTTCCCGG 262314 29 100.0 32 ............................. GCAACGTTCTCAGTCAACGATCGGTTGCTGCG 262375 29 100.0 32 ............................. TCCTGGGGTATCGTCGATGTACAGCATGTCGA 262436 29 100.0 32 ............................. ACCCATGGCATTGGCCACATTGGTCGTCCCCT 262497 29 100.0 32 ............................. TACGCTTTAAAAAATGGGCTGAGGGTTGTAGC 262558 29 100.0 32 ............................. GTCATTCAGTGCTACAACCCGTCCAGTCTGTC 262619 29 100.0 32 ............................. CAATTCCTGCCGGTGATTCCGCGGTCGGCAAC 262680 29 100.0 32 ............................. CCCGACAAAAGTCATTGAGCTTGTAAAGGCTG 262741 29 100.0 32 ............................. GCGTGCAGTTCTATAAGGATGGCGACGCGTTC 262802 29 100.0 32 ............................. AAAATGTGCGAGCTGTGGGATGACCTGAATGA 262863 29 100.0 32 ............................. AGACGCGGCAGAACCTGATCCCTCTCAGCCGG 262924 29 100.0 32 ............................. CTTTGCCCGGTGATAACAAAATCAGCAACTGC 262985 29 100.0 32 ............................. ATTACGCAGAGCAAATGGGATTCACTGTTACT 263046 29 100.0 32 ............................. TCAGGCGACCAGGTCGTCATGGACGTTTATAT 263107 29 100.0 32 ............................. GTACTGGAACCCCTTGGAACTGCGCAAAATGG 263168 29 100.0 32 ............................. CCTCCGGATTCATGTCCCATCTGGGCAATGAA 263229 29 100.0 32 ............................. GAGATACCGTTTTAATTCAATACGGCGGCGGC 263290 29 100.0 32 ............................. GGCAAAAAACGGATCCGCCACGTGGAGTGGGA 263351 29 100.0 32 ............................. CACCAGGCCGCCGTCTTTGATGACGCGCATGT 263412 29 100.0 32 ............................. AGGATCGGGATTTTCCCGGCGTTCCATCGCTT 263473 29 100.0 32 ............................. CATCGGAGGTGATAAATGCAGACAATTATCCA 263534 29 100.0 32 ............................. TTCTGGCAGGTCGACGACGACAACAATCAGGT 263595 29 100.0 32 ............................. CGGCTGATCTGCGGCCGCCTGGATGTGTCCAA 263656 29 100.0 32 ............................. CGCACTTTCACGATGATCATGCGTGAGGCGGT 263717 29 100.0 32 ............................. GCGTTATATTTGTGAGTCGGTGCTGAGTCCAG 263778 29 100.0 32 ............................. CCAGAAGAGGAGGCAACGCTGGATCTTATAGC 263839 29 100.0 32 ............................. TGGTCAGGGCTGATTGCAATGGACCGGGCAAA 263900 29 100.0 32 ............................. CCGAGCCTGAGTTTTGTGAACGGCCCAGCCAG 263961 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 264022 29 96.6 32 ..........A.................. ACGGTAATTATTTATGCCCTGGATAATATTGG 264083 29 96.6 32 .......T..................... TCTGACTGTCGAGGCATTATGTGCCCTCCGAT 264144 29 96.6 32 A............................ ACGGTCCGACAGAACGGCGCTGGAATCTCTCG 264205 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 264263 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 49 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCGCCACCTGAAGGCGCACATCCTGTAGCTATCCCATTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTGGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTTTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTTCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //