Array 1 525188-523958 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXPM01000002.1 Enterobacter bugandensis strain WCHEB045359 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 525187 28 100.0 32 ............................ ATTACGCACCCACGGACACACCCACGGTTTAA 525127 28 100.0 32 ............................ ACCAGCACGCCGGCGGCCATCGCTACACTATC 525067 28 100.0 32 ............................ TTCTGGAACACGACTGTGACCTGGTTGCCGGC 525007 28 100.0 32 ............................ GTTACCATTTAACGCAAATTCGTTAATATTAA 524947 28 100.0 33 ............................ AGCGCTTTCCTGGCTGAAGTGCGGGCGCAGGGT 524886 28 100.0 32 ............................ TTACCGAACGACGTCGGGGTAGTGCGCCTTAA 524826 28 100.0 32 ............................ TCCTGTTTAAGGATTAAGCCATGTCACCTGAT 524766 28 100.0 32 ............................ AGCAAAATGAGCTATGAAACGCTGACGCGCTA 524706 28 100.0 32 ............................ ATAAGCGCAAGCATGAAAGAGCCTATCCACAT 524646 28 100.0 32 ............................ AAAAAGCAAACAGTATTACATGCGCATGGCTG 524586 28 100.0 32 ............................ GTAATTACGACGCTTCACGAAGGGTTTAATGC 524526 28 96.4 32 .................A.......... TGTGTCCGGTTGATTTACTGCCGTGGCTGGCG 524466 28 100.0 32 ............................ TACATGGGCCGCCGGTGCGGCGACGTTCGCAA 524406 28 100.0 33 ............................ ACGTCTAACGGTTTCATGATTAACCATCTGACG 524345 28 100.0 32 ............................ ACGGCTATCTGGGCAATGGGCCACGGCGAACT 524285 28 100.0 32 ............................ TTTCGATTATATCTGCCTCCTGAAGTGGGAGG 524225 28 100.0 32 ............................ AAAAACAGTCGTCATACGTGCGGCCAAACCAC 524165 28 96.4 32 ...........................A CGTCGAAGTTTGAGAGGAGGATGGAAGGAAAG 524105 28 89.3 32 .........T......A..........A TTCAATCGAATTAACCGACAGTACCGGGAGTA 524045 28 85.7 31 ...........C...C......C....A ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [524019] 523985 27 82.1 0 ........T..A....A....C.-.... | A [523966] ========== ====== ====== ====== ============================ ================================= ================== 21 28 97.6 32 GTGCACTGCCGTACAGGCAGCTTAGAAG # Left flank : CGGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATCCCGGTAACGCGCAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCATAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGGATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGATGGAGTGGAATGGGGATTTTTTGTGCTGGGTGGTTTGTGAGAAGAACGATGTTTTGACCCTAATTTTTAACGGTTGTGTAATTCATTGATTTTAAATGAGTATTTTGGGTGGATAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : CTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACAGCACCACTAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 535497-534744 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXPM01000002.1 Enterobacter bugandensis strain WCHEB045359 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 535496 28 96.4 33 ..........................G. AACGATGCGACTTTTGCGGTAACTGGCTTGATA 535435 28 100.0 32 ............................ TTTCTGAAAGCACTCTATATCCAACAACCAGA 535375 28 100.0 33 ............................ TTTAGCATTGACCACGCAGCCAATATCTAAACA 535314 28 96.4 33 ..........T................. CATGTCGTACCCAGCCAGCTCTAACGACCCTTC 535253 28 100.0 32 ............................ TGTCCGCTTTGCAGCGACGCTTCCATCGTCTG 535193 28 100.0 32 ............................ TTTTTCTGTGTTGGGTGTTGTGGGGTGGAATT 535133 28 100.0 33 ............................ TACGGAACCCAGCTGATTAATCACAGGCTTTGT 535072 28 100.0 32 ............................ TTGTCGATGCCGATGTTTCGCGCCACATTAGT 535012 28 100.0 33 ............................ TCCCGGTCATGTTATCGGTCGGCAGATGCAGTC 534951 28 100.0 32 ............................ ACTCTTCCCACCTCGGGTTCAGCAGGCCACCA 534891 28 100.0 32 ............................ TGATGAAGATTTACTTTTGACAAACTGCGCCA 534831 28 100.0 32 ............................ GCTGACGTTACCGGAACAGAACCGCCTGCAGC 534771 28 96.4 0 .......................T.... | ========== ====== ====== ====== ============================ ================================= ================== 13 28 99.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCACAAACGCAGCCCGTATGTCGTTGCCTCGGGGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAGGTGGTGGAATTTGAGGATGAAGCGGAACAATCGCGACAAAAAGAGTGGCTGCTGGAAGATACCGAAACGAAATGTGACTACTGCCGGGCGTTAAACCACGTACTGCTGGTATCGCATTTTGACCGCGATATGCTGCCGCATCTTACAGGACTGCTCCATGACATCACGCATTCTATGGCTGCAGATGTTGTTGCGCCTCAACGTTCAGAAACGGTAGTTCACATTATTTCCTGAATGTAGTTTGTGGCGTCCGGGGTAGGCCCCTGACGCCACTGGCTTGACCCTTTTTTTTGATGATTAAGTAACCTTTTGATTTATATAATGCGAATTTACGTTTCAGAAAAAAGGGTTTAATGCGGGAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTGGTTTCCTTTCA # Right flank : GCCCCTCTGGGCTTTAATGCCGTGGAAATGGCGTTACTGTCCCACAGACAGTACAAGTAAATCCATCCCTCACAAATATTCACCTTGTCTATTTAAAAACGAAATACCATCATCCACACGCTATCCATTTTCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCATGTATATATTATTTGTAAAAATAATACTTTTAAAAAATAATGTGTTTTTGTTTAGTTATCACAGAAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCCGATAACATACCCGCACTCAATACCTTGAAATTAAAGCCGTTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCAAAGCGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTAAATGGTGGACGCGTTGAATATGTCACCCAGGAAGGAAAAGAGTCTTTTTACTGGAATATTCCCATCGCGAATA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 552624-552234 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXPM01000002.1 Enterobacter bugandensis strain WCHEB045359 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 552623 28 100.0 32 ............................ TCTAGAATATACTTCAAAGATAAATCTAAACC 552563 28 100.0 32 ............................ ACGAACAGGCGATCCCCGCAGCGGTTAACTCC 552503 28 100.0 32 ............................ GGTAAATCCGGCTTTTTTTGTGCCCCGGGCAA 552443 28 100.0 32 ............................ AAGACTCTCCATCGCTTGCTGTATTTTTGGGG 552383 28 100.0 32 ............................ CTTATCCGTTACGGTTAATTTATGGCTATTAC 552323 28 100.0 33 ............................ ACGACGGCCAGGAGAGAAAGTGCAATTCCTGCA 552262 28 89.3 0 .....................A.GC... | C [552236] ========== ====== ====== ====== ============================ ================================= ================== 7 28 98.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTCACGGTTTGCATAAGCTGTTTGGTGGCGTGGGCTTTATCAGCGGCATGCTGGTAGAGAAAGGGCTGCCGGGATTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCACCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCATGGCTGATGGTGGGAGTGGGTGAAACGTTCGCGCTCGATAAGGTTGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTGTTGGCTCGCTGGCGGTAGCGTGTTTAGGGGCAGGGCGGTTTGCGTTAGGGAAAGCGCCTGCGTGGCAATAAAGCTGGGTGCTAAAAATATAAGGGTCTCTGGACCCTTTTTTATTGGTGGTTTTTAAGTCTTTGATTTTATTAAGCGGAATTATTTGTGATGAAAAAAGGGTTTAAAGGGTATTTTTTAGGGGAATTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCCA # Right flank : CGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGATCGAACGTTTATCGCTTATGCGAGGACCAAATCCCCCTGCGGGTGGCACGAGCACGCCAGCACGTAACCTTCAGCAATTTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTATATTCCCCTGAAACCACTTTCGTTTTACAGCAGCCGCACACGCCCGCACGGCAGGCCGCGACTACCGGCACCTTGTTGCTTTCCAGCGCTTCCAGCAGCGTGGTGCCCACGCGGCCAAAGAAGGTCTGTGCGGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAGCGGGTCACGCCAAGCGCTCTAACTTCTTTCTCCACGATATCCATGTACGGCGCCGGGCCGCAGGTCATCACGGTACGGTTCGCAATGTCCGGCACGCTTTGCAGCAGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //