Array 1 186897-189002 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENHP010000021.1 Actinoplanes sp. LDG1-06 NODE_21_length_193669_cov_27.911306, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================ ================== 186897 29 100.0 32 ............................. GACTACATGGACGCGGCGGTCGGTTCGGGCGG 186958 29 96.6 32 ............................G GAGGGCTTGTGGTTGCCACCGGCGGCAAAGTC 187019 29 100.0 32 ............................. GCCTATGCCCGTCTGCTGGCGCTTCCGACCCT 187080 29 100.0 32 ............................. TTCGTCTCCGCTATGTCGGAGGTGACCATGCG 187141 29 96.6 32 ............................G GCGGTCACGGATCGCTGGGAGAAGCCTTCGGA 187202 29 96.6 32 ............................A TGGCCGAGTCCTACCTGGGCGACGCGGTCACC 187263 29 100.0 32 ............................. TCGTCCCAGTCACCGCCACCCGTGGCGGGCGG 187324 29 96.6 33 ............................G GAGCGTCGTCAGGCAGGACACGCGGGAAAAACC 187386 29 96.6 32 ............................G TAGCCCAGGGCCAGGCCGACGGCGAGGGTGGT 187447 29 96.6 32 ............................G CCGAACGGATCGTCTCCCTGATCACCGCAGGT 187508 29 96.6 32 ....C........................ GACAACACCAACCCGAAGGTGCCGTTCGACGG 187569 29 100.0 32 ............................. TCGCGGTGACGATGAAGCAGGCGGGTGCGGAC 187630 29 96.6 32 ..........T.................. AACACGGGAACCCCGGACAAGGACGCCGCGGT 187691 29 100.0 32 ............................. AGCCTGATCTTCTTCAACGTGCTCATCGTGAC 187752 29 96.6 32 ............................G TTGGCGGATGCGCAGAAGGCGGTCACGGAGGC 187813 29 96.6 32 ............................G GCCCAGCCTGCCCACCGCAGAGGTGGACGGCG 187874 29 100.0 32 ............................. TTCACGGTCAACCTCACCCAGTCGGCCATTCC 187935 29 96.6 32 ............................A TGGGAATACATGGAGCACGACACCACGTGGGG 187996 29 93.1 32 ....................A.......G CTGGCCGGGGTCATCATCTGCACGTCGGGCAC 188057 29 100.0 32 ............................. TCGGGCGGGACATCCGGGACCGCCTGATCCTC 188118 29 89.7 32 T...G.......................G CTCACCGCCTCGAGCGTCATCGGCCCGGGCGT 188179 29 93.1 32 .........................C..T CCGTATCCACCGGACTCGCTCTGGGTCGGACA 188240 29 96.6 32 ........................G.... GGACAGCAGACCCTCCCGGCCCGTGAGCGGTG 188301 29 96.6 32 ............................G GTGATCCAGACGGCGACGCAGAACATCCCGGA 188362 29 96.6 32 ......................A...... TGACTGACCGGACACTGACGGTCGCCCTGCCC 188423 28 79.3 30 ...A.G........A........-C..G. CTGGCGCATCACCGCCCTCGCCGTCCGCGG 188481 29 96.6 32 ...........A................. TCGCCGTTCGAGAGGCGGGCCTAGATGGATTC C [188497] 188543 29 93.1 32 T...........................G GTCACCAAGGCCGCGGGGTTCCGCGAGGGATG 188604 29 93.1 33 ........T..C................. GGGCGGGCGCCGTTAGTAGCCGGCCCCGGTGGC 188666 29 86.2 32 .......T..T..T...A........... TGCTGGGAAACCACCTGCTGCCCGGCGATTGT 188727 29 89.7 21 ...T......T.................G CAGGAACGGCGTCTGCTGGCC Deletion [188777] 188777 29 93.1 32 ..............T..A........... CCGTACGCCTCGGTCAACACCGGCCCGCTCAA 188838 28 75.9 48 AC...A....T.........T...-...G TACAACCCGTTCGGCAACGGCGTCGGTGATGCTGTCGGTGACAGACGC 188914 28 86.2 31 .....T........T..-.......A... CAGAAGGCCCGACCACGACGGAGCTGGACGC GT [188927] 188975 28 79.3 0 ......A.......T....C...-C..T. | ========== ====== ====== ====== ============================= ================================================ ================== 35 29 94.3 32 CTGCTCCCCGCGCACGCGGGGATGATCCC # Left flank : ACGTCGGTGACCGTCGGCAGGCTTGTCATGTGGAGGTCTCTCTTCGTCCACCAAGCTCGCGGGGGCGATAGGGAAACCAGAATTCGGCCCGACCGCGAAGCGCTCTACGCGAGGATCATGGCGGGTCCCCAAGCTGGCAACTGAGGATTGGCTGGTGCATCGGCAGCTCCGCCACTAGGGCGATGTTCGGGCCGGCTGTCCGTCGACGAGACTCCCCCTCGCACACCCGTGGTAGTCAGTAGGTCTCGGAAGGTCGGCCGAGACCCTCGACCAGCAGCATCCGGCGTTTCTGAGCCGTCGCCCGAAGGATGAGAAGGCCCTGTGAATATCTCTTCATCCTATATCGACAAACTAGTCAGGGACCGATTTCGCCGCCCGTGCCCGCGGCTCGCAGCGTGTGTCGTTTCGGCGCTAAAATGAGGCACTGAAGCAGGACGCCTCGGGATGGAAGAGTGAACAAAATCGGGGATCTTGATCTCTATTCCTGCAGGTAAATTAGT # Right flank : CGGCAGCGAGCCTTCGCAGGCACCTCGGCAGACTCCGTACGACCTTGCACCGAGGGCCCTACTGACGGCCGTACCGCTTTGGACTGGCAATACTTTCGTTCGCCAGGATAGACGGTGCCCGTCGTCCAATTCGGAGCCCTAGGGAGCGTAAGAGCGAAGGTCTCGTGCGTCGGCTATTCCCGTCGGCATCTTGCGGTTCCCCTTTAATATCGGTGCTGCGGGGCTCCGTCGGAGAGAATTTGCATTCTCTCGCGTTGCGCAATGAATTCTTCGACTACTGAGCGGCGGTAACGAACATATTTTCCTACTCGGAAGCCAGGCGGGCCCTCGCGGTTGCTACGCCAAGTTCGGACAGTTCCGACTGGTACCTTCAGCATCGTTGCGACCTCTTCGACCGTCAGCAACTCATCCTCGGCCTTGTTTGGCTGCATGTCTGGGTCACAATCCTAGGAGGGTGGGTGCGGTTTTCAAGGACTCCTGCAACGGGGCGCCGCGCCAAC # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-39] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 497-2707 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENHP010000030.1 Actinoplanes sp. LDG1-06 NODE_30_length_116302_cov_27.589938, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================================== ================== 497 29 96.6 32 ............................C ATGGTCATCTCCCTCCGGGACGGAGCAGGGCC 558 29 96.6 32 ............................T GCCTGCTGGGCCAGTTCGTCCGTGTGGACGAA 619 29 100.0 32 ............................. GGTGTGTTCGCGGGCAGCAGCTGGTAGTAGGC 680 29 100.0 32 ............................. GCGTCGGCGCCGGCCCGTTCCAGCACACCCAC 741 29 100.0 32 ............................. CAGTGGCGCGGCAAGTGGTACGTGGACTCCGG 802 29 96.6 32 ............................C GAGGACCGTACCCGGGTGAAGGTGAAGTGGCC 863 29 96.6 32 ............................C ACCCACCTGTCCGGGCATGCCGGCGGTGACCT 924 29 100.0 32 ............................. GGCCGGATCTGCTCGACCTTCTCGCCGAGACC 985 29 96.6 33 ............................C GGGCGTCGTCTCCCTCAACCGGAGGCGGCGCCC 1047 29 100.0 32 ............................. AACCTGCCACCGCTGCAGCCGACGAACAACGT 1108 29 100.0 32 ............................. GGACTGGGGTTCGCGCCGACGGTGGAGTCTGC 1169 29 100.0 32 ............................. CCCACTGCGCCGCGGTGACGAGACCGATCACC 1230 29 100.0 32 ............................. CTGTCCGACATCTGGCAGGAGTGCACCTTCAA 1291 29 96.6 32 ............................A TGGATGACCGCCTGCCGGTACGAAGGAAGACC 1352 29 96.6 32 ............................C GCCCACCCTTCGGAGCCGTCGCCGGGCCGCTC 1413 29 100.0 32 ............................. GGCAGCAACCGCATCGTGACGGTGGTGCTGGT 1474 29 100.0 32 ............................. GTCTTCCTTGTCACCCTCATGCCGCCGGACTT 1535 29 96.6 32 ............................C TACGGGCCCACGGTCGTGCGCGCGGCGGCGAC 1596 29 100.0 32 ............................. AGCGTGCTGCCGCCGCCGGCTGGCGTGGGCCG 1657 29 100.0 32 ............................. GTGGTGAAGGACAGCGGCGAGGGTGCCGTGGC 1718 29 100.0 32 ............................. CGCGAATACGTCAGACTTCGGTCGGGTCGGTG 1779 29 96.6 33 ............................T GGAAGCGGTCGCGCGAGGCCGACGCCCGCTGGC 1841 29 100.0 32 ............................. CGTGGATGGCCTGACTCGACCCCGGCCAGCTG 1902 29 93.1 32 ..........T.................C GACGGCGACGACGACGCCTGGCCGATGTGGAT 1963 29 96.6 32 ............................C GGCCTCTCGGATCACGTGCACGAGGACATCGC 2024 29 93.1 32 ..........T.................C CAGTCGCCCATCCACGGGGCCCAGGTCACGGC 2085 29 100.0 32 ............................. GCCCGCGACGGCTCCGCGTTCATCGCGCCGAT 2146 28 75.9 51 .................T.TC.-C...GA CACACGCGGGGATGATCCCCGGTACGAGCGGCACATCACTGCGGTCTTCCG 2225 29 100.0 32 ............................. TGGCGCGGCGAGAACATCAAGACGGGCCGGAC 2286 29 93.1 49 ...T........................A CGGGAGATCATCAGCGGGCCGTTGGGTACCGGCCTGCTCCTGTCGTTGA 2364 29 89.7 29 .A...T.......G............... TCGTCCCGGGCGATCACGTCGATCAGATC 2422 29 89.7 32 .....T.........C...........T. GAGCTACGTGATGCGGACCCGCAAGTTCTGGC AC,T [2427,2433] 2486 29 82.8 29 .....G.T.............CA.....C ATGAACGAGCCGCAGGCCCTGGCGCGCAG 2544 29 96.6 45 ............................C GAGGTCGGCGACGACGAGTCGCTGGGCACACCGACAGGGCCAGCT 2618 29 89.7 32 .......T...................TC TACCAAACCACCATCGCGGCCGGCGCTTGGGC 2679 29 89.7 0 ......TT........T............ | ========== ====== ====== ====== ============================= =================================================== ================== 36 29 96.1 33 CTGCTCCCCGCGCACGCGGGGATGATCCG # Left flank : GAACTCGGCTACCTCAGCCCCGATGAATACGAGACCGCCTGGCACACCCAGACCGAGCCAGATAACCTCACCCCTGCCCCGACCGGAGCCAGGTAACCCCCGCTCCCGGAAACCGGGGGGAACTCACCTTGTCCCCGCTACCTGACCCTGACCGCGGGCTTGTCCGAGGCAGCCGCCCGCGCTGGCTACACGAGAACCGATGCCTCGATCACCCTGACCAACAACCTGACCCTGTACCCGTGGTGGCGAAACGAATGACCCGCGCGATCACGTCGATGTCCCGGCATCTTTACCGACCTACCAATCGAATTGTGTAGGCGAGGCCGGAGCGGTTGCCGTATAGAGTTCCAGATGCTGCCTGCACGTGTGGCAGCCAGCGCTGACCTGCTGGCACGGCTTTGACGGCAGATAGCATCGCAACGGAGGCGGCGGATCGTGCATCACACGAGTGAACAAAATACGGAATCTTGATCTCTGGACCTGCAGGTCAAGAAGCC # Right flank : GCGGCATGCCCGCCTCCCGAGATCAGGAGTTGACTGCTCCCCGCGCACTTGTCGGTGACATTTGTGCTCTTGACGGTCAGGATGAGGTGGCGCAGCCCGATGCTCTCAGCGTTCAGGACTGCTGGTGAGTGATCCCCAAGCGAGGCCGTCGTTAATCTCCGAGGCGAGGGCTTCGCCCGCCGTTGCGACTTCGTGTAGTCCTGACTGGAACTCGGCGAGTTGACGGAAGGCCCGCCCGTACTCGCGCTGTTGGTCGAGCGGGAGCACGGGGATGGTGAGGCGTTTGACGTCGATGCGGCGGGCGCCGCTGCCGACGCTGGATGCGCGACCGGCGACCCGTGCGTTCTCGGTGCGGGAGAGCGTTCCGGCCACGAACCAGGGGTTGAACTGAGCGCTTTTGATACGAACGAGTTGGTGGCCTGGTTCGAGCTCCTTGCCGATCTCATCGGGAGTGGCTACTCGAGCAGTGATCGCGTGACCTGTGATGGGGACAACAATGT # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 18608-20332 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENHP010000030.1 Actinoplanes sp. LDG1-06 NODE_30_length_116302_cov_27.589938, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 18608 29 93.1 32 .A..........................C TGCGACCAGCCGATCATCCGATCGGGTGTGAC 18669 29 96.6 32 .A........................... GCCCTGAAATGACGACCAGCGAAGCGAACGAA 18730 29 93.1 32 .A..........................T GGTTAACCAGGTGACGGCTCGGAGAGACGAGA 18791 29 96.6 33 .A........................... TAGTAGGGCAGCACGCTGACGACGGCGGCGTGG 18853 29 100.0 32 ............................. GAGCACGGCCGCGGCAGCAAAGAGGCCAAGGC 18914 29 96.6 32 ....................A........ GTGAGGCTGACGCCGTCGGTGAACAGGCTGAC 18975 29 100.0 32 ............................. AAGACGCACGCGGCACACAAGCGGGCTTGGTC 19036 29 93.1 32 ...............A............C GGCACTCGCGGCACGTTCATGTGGTCGCGCGT 19097 29 96.6 32 ............................T TCGAAAAGGTGCTGCGAGATGGTCTGGGCGAC 19158 29 96.6 32 ............................C GGGCGGCGGCACACCTACACCGGGGCGGTCTG 19219 29 96.6 33 ............................T AGGCAACCGGCCAGGATGGACAGTGCCGCCCAG 19281 29 96.6 32 ............................C GACCTGTGCCGCATGGTGATCCTCGGCATGAT 19342 29 100.0 32 ............................. CACGAGTACTACCGCGGCGTCGCCGAGATGAT 19403 29 96.6 32 ............................T ACGTTCGAGCGGGCCGGATCCGATTGCCGGTC 19464 29 96.6 32 .........A................... CGCCAGGCGCAAGCCTCGTTCGGTGAGGCCAT 19525 29 100.0 32 ............................. GTGTACTTGACCAGCGTGGTCAGCTTCTTCGT 19586 29 100.0 32 ............................. CTGATCGAGTTGGCGCTCAACGGCAAGACGCC 19647 29 93.1 32 ......T.....................C AGCTCCCCGCCGGTCTCGGGCTCGGCCCATTG 19708 29 89.7 32 ......................C..G..C CAGATCACGCACGCCAGCGAATCCTGGCTATC 19769 29 86.2 31 ......T..............GG.....A AAGGGAAAATCACGACATCTGAGTACGTCGA T [19790] 19830 28 89.7 32 ..-A....................G.... CCGAGTGTCAGCGCGCCGCTCTGGCCGCCGGC 19890 28 75.9 32 ......G..A......-...AC..G...C CGGACCACCCAGTAGATCACGAACCAGCAGAA 19950 29 86.2 25 ...............A.....G.A....T GACCCGGCCCGGGCACCCTGGCGGA Deletion [20004] 20004 29 96.6 32 ........................G.... TTCAAGGATGAGTCGCCCGCAGCTCTGGCTAC 20065 28 93.1 32 ........G........-........... TGGTCGATCTGGTCGGTGATGATGCCGGGCAT 20125 29 89.7 32 ............AG..............C AACAACGCCACCAACAAGGTTGGCCTGTTGAA C [20130] 20187 29 89.7 30 .........A.T.....A........... TATCCGCGCAGGAAGACGTTGCGCTTGGAC 20246 28 89.7 29 ...-.T......T................ GAGGCGTCCACGGCGGCTCCCGAGGCTAG 20303 29 69.0 0 .G....T.......T..CC..GCA....A | G [20308] ========== ====== ====== ====== ============================= ================================= ================== 29 29 93.0 32 CCGCTCCCCGCGCACGCGGGGATGATCCG # Left flank : TCCACCTCTGGGACGACAAAGGCTACGAAGTCGACGCCGGCCGCAACTACGCCGACGTCGGCGACGTGGACTTCTGATGATCGTCATCGTTCTCACCTCCTGCCCACCTGGACTCCGCGGACACCTGACGCAATGGCTGCTGGAGATCTCCGCCGGCGTGTACATAGGCCACGTCAACGCTCGCATCAGGGAACGCCTCTGGGCGCGGGTCATTGAGATGGCAGGACCCGGCCGTGCACTGATGGTCTTCCAGGAGAAGAGCGAGCAGCGACTCTCCTTCGCCGTGCACGACCATCACTGGGAACCCGTCGACCTGGACGGCGTGACACTGATCCGCCGCGCCGGAGACTCACCCTTCAACCCAGCCCTGCCGTCCGGCTGGAGCAAGGCGGCCAAACGCCGCAGATTCGGCCGCCGAGGCACCCAACGCGGTCCCACGTCCCCTACACAAAGTGAACAAAAACCAGGTTCTTGATCTCCGTCTTCCCAGGTCATTTAGT # Right flank : ACCGAACCTTGGTGTCCAACCTGAGTGATCGGATGGCTCGGCGGCGTGCTGGCCATCCCCTGAGCGCTCAGGGTTTCTTCGGCGGGTGTGCTTGCGCGCCCGCAACGGCAGAGCCTATGTCGTGCTCATTGGGCAGCGCGGTAGGCGTCTACAATTGTTGTTGGGATTCGGCCTCGGTCTGAGAGTTCGAATCCGTTCTTGTTGGCCCACTCGCGAATCTTCTGGTTGCGTTCTCGGTGATCAGCGACGGACGTTGTTCTTGATCCGCGACCCCGACGGTCGTCTGCGCTGCTGCTGCGAACCTTCGTTCCTGCCTTCAGGAACGGGTCCAGCGCCTTTCGTAGCTTGCCGGCGTTCTTCTCTGACAGGTCGATCGTGTAGTCGATTCCGTCGAATGCGAACTCGACGGTTTGGTCGGCTTCGCCACCATCAAGGTCGTCCAACAGCTTTGTAATGACTTGCCGGGCCATGCGGCTTCGCTCCTTGTGGGTTCAAGTCGG # Questionable array : NO Score: 5.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.23, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCTCCCCGCGCACGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-39] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 28-200 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENHP010000044.1 Actinoplanes sp. LDG1-06 NODE_44_length_24121_cov_24.763941, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 28 36 97.2 32 ................................T... GTAGCTGAAGGGTGGGTGGCGGCAGGGAGGGT 96 36 100.0 33 .................................... CCTCGCCCGAGGCCCGGCGGCAGCAGCGAGAGC 165 36 94.4 0 ...........A...................C.... | ========== ====== ====== ====== ==================================== ================================= ================== 3 36 97.2 33 GACCGGCGACGCCGGCCGCCTGGGACCCAGCGCGCC # Left flank : TGAAGGGTGGGTGGCGGCAGGGAGGGTG # Right flank : CCCTCGCCCGAGGGTGGATACCAGCAAAAGAGGACAGACAGCGCCCGGCCCCCCAGGCCGGACGCCGCCATCACCGCGGAACTAAGCGATCTTGCGCTTATAAGCCATCATCGCCAGCCCGTACGAGACCACCAACACCCCCACACACCACGCCAACGCGACCCAGATGTCGTTCCCCACCGGATCCTGATCAAGCAACGCCCGAATCGAGTTGACGATCGCAGTAACCGGCTGGTTCTCAGCGAACGCCCTGACCGGCCCCGGCATCGTCTCGGTAGGAACAAACGCCGAACTGATGAACGGCAGGAAGATCAGCGGATAGGAGAAGGCGGAAGCGCCGTCGACCGTGGACGCGGACAGGCCGGCGATCACCGCGAGCCAGGTCAGCGCCAGCGTGAAGATCGCCAGGATGCCGAACACGGCCAGCCAGGCCAGCGGGCCGGCCGAGGAACGGAAACCGATGCCCAGGCCGACGAGCAGGATGACCAGTACGGAGATCG # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACCGGCGACGCCGGCCGCCTGGGACCCAGCGCGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.40,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [13.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //