Array 1 87754-93395 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCPA01000003.1 Corynebacterium striatum strain NSCs20 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 87754 29 100.0 32 ............................. GAGTCTCCAGCGTCGTCCGCTGCGGCTTTCGC 87815 29 96.6 32 ............................G CCCACCGGCCACAGCACCAGCCGCCACAGTCA 87876 29 96.6 32 ............................T CGTGGTAGGTCACTTGCCTTGTAGCACTCATA 87937 29 96.6 32 ............................G GCGAGACCGGCAGCGTTGAAAATGTTTCGTGG 87998 29 100.0 32 ............................. GTCGCGAAGGAGTCTGTGGGCATTGGTGGGGA 88059 29 100.0 32 ............................. CCACAGCAGAAGAAGCTCGCGATGAGGAGCGA 88120 29 100.0 32 ............................. CATGACTAAGACCCTCGCAGACATGACCCCAG 88181 29 100.0 32 ............................. ACCAAGAGCGATTTAGTGCGCTGCAGGTTCTC 88242 29 100.0 32 ............................. CCTGTCCCGCGAGCGCACAAACACCGTGTCTG 88303 29 100.0 32 ............................. ACGGGGCGCTGATCCTCCGGCACGCTTTCTGG 88364 29 100.0 32 ............................. GACTACCTCACCGCTAAAGAAATGGCAGTCAG 88425 29 100.0 32 ............................. ACACCACCGCCGGTACAAATAGGCGGAGACAC 88486 29 96.6 32 ............................G TTCCGGCTCTCCACGGTATCCACCAGTCTTAG 88547 29 100.0 32 ............................. TTCGACCGCGCTGCCCTGGCGCTGCCGAGCTC 88608 29 96.6 32 ............................T AAGCGTTCCGTTGCGTTTTCCACACCGGAGCT 88669 29 100.0 32 ............................. GTCCAGGGGCTCGCCGTCGCGCGTTGCTTGTA 88730 29 100.0 32 ............................. CGGAACTGCCGGGCCTGAACTTTCCGTACCCG 88791 29 96.6 32 ............................G ACACACGGTAGTTACGATTCCTCGCTGTTTAT 88852 29 100.0 34 ............................. TCTCGCGAGGGTCTCGCGAAAGGTCATCGGCGAA 88915 29 100.0 32 ............................. CTGGGATTGGGTTGGTGGCAGCCATGCGTCGA 88976 29 100.0 32 ............................. ACCAAGAGCGATTTAGTGCGCTGCAGGTTCTC 89037 29 100.0 32 ............................. GGTGACGAGTTCTGCCGGGTCAAGGGTGAGGT 89098 29 100.0 32 ............................. CCACAGCAGAAGAAGCTCGCGATGAGGAGCGA 89159 29 100.0 32 ............................. TTCTCGGATGTCAGTACCAAGGTCAAGTGTTT 89220 29 100.0 32 ............................. GCGGCGGCGTTTAAGAACGCGGCCGACAGCTC 89281 29 100.0 32 ............................. ACATTTGTGATTAATTGATGTCGCCCCAGCGT 89342 29 96.6 32 ............................G AACCAGAAACAACAGGCATAATTTCTCCTTAA 89403 29 100.0 32 ............................. AGCTCGCGACCATCGCCCCGGTACTCTTCGGA 89464 29 96.6 32 ............................A ATGCGGCGGGCTTCTTCGTGGGTGATTTTGCC 89525 29 100.0 32 ............................. TTGACACCCCATACAAAGTTGGCGACACCGTA 89586 29 100.0 32 ............................. ATCACGGTTAACGGCGCGCTCGACGCCGATCG 89647 29 100.0 32 ............................. AACGCCTCCGCGAGATATGCTTCAATGCATTC 89708 29 100.0 32 ............................. GTCTCCGAATTCTGGTATGCGGTGATAAGGCC 89769 29 100.0 32 ............................. AATATGGTCAAGTGAAGCGCTCATAGCATCAG 89830 29 96.6 32 ............................T AAGTCGGCAGTTAACACACCTTATTTTCCGTA 89891 29 100.0 32 ............................. CAGTGCCGTCCGCGCCCTTGGGTCCAGCCGGG 89952 29 96.6 32 ............................T ACGCCGCACCGTATCAGCCAAGACAAAATCCG 90013 29 100.0 32 ............................. AACATTAAGTATGGCGCACATTTTTATAACAA 90074 29 100.0 32 ............................. CCAGGAGGTCGACGAGGACTTTGTGGAAATCG 90135 29 100.0 32 ............................. CACCCCACGAAGCGTCTCAGAACCAACCTCAG 90196 29 100.0 32 ............................. GGACAAGTCGACGTCTCACGTGCCCCGGTATC 90257 29 100.0 32 ............................. GACGAGCGACGCGGGATAGAGTCGCCACGCTC 90318 29 96.6 32 ............................G TCACCGTCCAATCAGCACGGCCCTCAAGAGAA 90379 29 100.0 32 ............................. AAGGCGTGTTTCTTGTCCGGGGTGGTCGCGGT 90440 29 100.0 32 ............................. TGTTGTCTTTGGTGATGATGTGACGCTGCCTG 90501 29 96.6 32 ............................G CGAAGGGGGCTAAAAAGTAATGGGCCTGGGAA 90562 29 100.0 32 ............................. ATAAGTCGGTAGGCCGGTACGCACCGCCCCGG 90623 29 100.0 32 ............................. GGAAAAGTGCAGGGGCGATTTGTTGATGATGA 90684 29 100.0 32 ............................. TCTTCCGCGGTGGCGAGATACCAGCTTATGCC 90745 29 100.0 32 ............................. TTACAGCCGGTTACAATCCGGTACCAGTACAG 90806 29 100.0 32 ............................. TACTAGGGGCAGGCAGCGATGCCGCACACAGA 90867 29 100.0 32 ............................. CACAACACCCTGAACACTAGTACGCACATCAC 90928 29 100.0 32 ............................. TTATAGGGGCGCTGGAAGCGGCGGAGCTTCTA 90989 29 100.0 32 ............................. ACGCATCGTCCGCCGCATGGTCAGCACCCCAG 91050 29 96.6 32 ............................G ATTCTAGGGATGCGGCTGCTGGGTTGGCTGAG 91111 29 100.0 32 ............................. ACCTGGACCGCATTTGCATCACTCATGAACTT 91172 29 100.0 32 ............................. ACCTACATCCTCTCTTTGCTGCGCCGCTGGGC 91233 29 100.0 32 ............................. GTCGCCGGACACGGCCACACCAGCGTCCACAC 91294 29 96.6 32 ............................T CAACCGGCGACATACGCACAGAGAAACGGAGT 91355 29 100.0 32 ............................. ATGCAGGCGGGCGGCTGGGCATTCACCCTGAA 91416 29 100.0 31 ............................. GACCTGGTGACGGTAAAAACGGGGGTAATCT 91476 29 100.0 32 ............................. TCACATCCCTAGCCCAATGGCTCTACTTCACC 91537 29 100.0 32 ............................. ACCACCCAAATCAAACCCCAAATCTGGGCCGA 91598 29 100.0 32 ............................. GCTGGCTATACGTGCAGGAAGTCGGAATCTAC 91659 29 100.0 32 ............................. GACGGTTAACGTCGGCTGATTCTCGTCAGGCT 91720 29 100.0 32 ............................. CACCCATACAGCCCATTGACCGCATCAAAAGA 91781 29 96.6 32 ............................G CATAAGAACCTGACCAGCACGCTAGGAAAGTT 91842 29 100.0 32 ............................. TCGCCGCGCCGTGGCGCGCGCACCCCTTGCTC 91903 29 100.0 32 ............................. CGTCTGATTGGCAGACTGCGCGTCTGTTGGCG 91964 29 96.6 32 ............................G CGTCGGCCACAATCTCCACACCCCTACTGGAG 92025 29 100.0 32 ............................. TGTGTGGTCGCGGGTGAAGGCTGGAATGCTGT 92086 29 100.0 32 ............................. AATTCCGAACACTGTGCGCATAACATCCCACG 92147 29 96.6 32 ............................G AATGGACCGTACAACAGAACTTAGAGATTCTG 92208 29 100.0 32 ............................. ACTAACCCCGGCCATGCTGAAGACATTACTAA 92269 29 100.0 32 ............................. TGGACGGCGGCGTTAACGTACATGCCGGAGTA 92330 29 100.0 32 ............................. AGGAATATTTTGGGGGGAAAGTGACCGCCTGT 92391 29 96.6 32 ............................G TCCTCAAGGGTGACGAGTTCTACCGGGTCAAG 92452 29 100.0 32 ............................. GTCTGAAGGATTTGGGGGCCGTTGATTCTAAG 92513 29 100.0 32 ............................. TCTGGGCCGACAAATAACCCCCCCAACAGCCC 92574 29 96.6 32 ............................T CACGTAGCCGCCACCAGATGACTCAAAAGTAC 92635 29 96.6 32 ........T.................... GAGTCATAGAGCTCATTAAAGCACCCTGAGTC 92696 29 100.0 32 ............................. TCGACGATGAGAACGATTCCTGGATACTGCGC 92757 29 96.6 32 ............................G CACGGAAAGGTGTTCCAGGGTGCGGGCTACCA 92818 29 100.0 32 ............................. CGTAACCGTAGAACTGGAGTAAAAATGACCTC 92879 29 100.0 32 ............................. GAGTTAGAAGCCGAGGTTGGCCGACGGGGCAT 92940 29 96.6 32 ............................G CCTCGCAGGATGCGGCGGCAGGCTCGGCTTCA 93001 29 100.0 32 ............................. CCGGTGACTTACTCCACGCTGAATGAATCCCG 93062 29 100.0 32 ............................. CAGTGGCCCTGGTAAGCCTCTCCGCGGGACGT 93123 29 100.0 32 ............................. CGTTGGGTGGACAGCGGACGGATTAAACCCGT 93184 29 100.0 32 ............................. CGACATCGCGCGACTTTGTGGAATCCCATCTC 93245 29 100.0 32 ............................. GCGCCCAATTCTCTCTTTTCCGCAAGATCCGG 93306 29 96.6 32 ............................G CCGGAGACCCGCGTAGCTGGCGTGCCGCCGCT 93367 29 96.6 0 ...........................G. | ========== ====== ====== ====== ============================= ================================== ================== 93 29 99.1 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTGCTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGTGCTGCTCGAAATGCTCGCCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : CTTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAGAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTCAAAATCGGACCACACGGTCCCTACATCCTCATCACAAGATGCGAGCAATCCTCATTTACGCTTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGAGTGAAACCCTATACAGCGTCGAAGCGACATTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGCGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //