Array 1 200676-205498 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHYB010000001.1 Microbacter margulisiae strain DSM 27471 Ga0315740_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 200676 29 100.0 37 ............................. TATTCACATTTGAATTATAATCGAACGCAACACATAT 200742 29 100.0 37 ............................. TATCACCCATTTCGCGTGCTAGTTTTGCAAGAAGCAT 200808 29 100.0 38 ............................. TCAATCTCATATTTATCAATATCAGAAAAATAGTAACA 200875 29 100.0 36 ............................. TAAACGAAAAATCACCTATTTGCTTTGTAATTTCTT 200940 29 100.0 38 ............................. TACTCGAAACCTCGTTGTTGGTTGAATTCCTTGAACAC 201007 29 100.0 38 ............................. TCGCAAACTATACAGAATGAAACGTTGCCAGGCGCTAA 201074 29 100.0 36 ............................. TAATTTTGTTTAATCGTTCAAAATTGGATAAATGTG 201139 29 100.0 36 ............................. TGAATTATTGGATGTTTCAACAACTTTTGCAACATG 201204 29 100.0 38 ............................. TTGATGAAGAAGCTCGCTATAGCAGGTTTGGAGCCTGC 201271 29 100.0 36 ............................. TAAGGCTGACATTATTACTGTTAATATCCAGCCAAT 201336 29 100.0 37 ............................. TCTTGGTATGAGTATTAAATTGTTAATATTTGACTGA 201402 29 100.0 37 ............................. TTGAGAAAGTTTCGCAGGAATATGAGAAAAAAGCGGT 201468 29 100.0 36 ............................. TGAAAAATGCGGAATACCGGCGAAAATGGCTGAATA 201533 29 100.0 36 ............................. TATATTTAAATGAAACTTCTAATTTTCTAAGGTAGT 201598 29 100.0 35 ............................. TGAATCCATCATCAACATAATAACCTGACGTGATT 201662 29 100.0 35 ............................. TCAGGAAGTTTTGAAAACTTATAAACAAAATCATC 201726 29 100.0 36 ............................. TAACTTTATATTCGATTTGCCATCCGGTTTCCCATT 201791 29 100.0 36 ............................. TTCCAGACGAGCTTTAGTAAATACATTTGCACGGAT 201856 29 100.0 37 ............................. TTAGGCTACTGGAGTAGTATCATAAACGGAAAGATTT 201922 29 100.0 36 ............................. TGTTAAAGAAAATATCTTCAGTGATTTGACATTGTG 201987 29 100.0 37 ............................. TAATTTTTTTAGTGTTAAGTCGTTTCCCCTCATACTA 202053 29 100.0 37 ............................. TGTTACTTCAATCTTTTCATAAGCTCCAAGCGAGTTT 202119 29 100.0 36 ............................. TATATTAAAAAACTTACCAATCGCCAGTCTATTGTC 202184 29 100.0 37 ............................. TCGGAAATCAGCCGTTGCATTAACACAAGAAAATAAT 202250 29 100.0 37 ............................. TATCAATTTCCATTCTATACCAGGACAATTACACCAT 202316 29 100.0 37 ............................. TAAGAGAACCCCACGCTGTCCTGTATAATTTACCACA 202382 29 100.0 35 ............................. TTGTGATATATGCCAACCTTTGAAAGTTGTCCGGT 202446 29 100.0 37 ............................. TGCAAGAGACGCTATGATAGTATCTCCGTCTTTCACC 202512 29 100.0 38 ............................. TCATAGAATGATTCCTGATCGACAAGCATAATAGTAAT 202579 29 100.0 37 ............................. TTACGCTACTTGACTTTCGAGGTACGGAAGCATAGAA 202645 29 100.0 35 ............................. TATAATTCAGGAGCCGAAATACATGTGTCAAACTG 202709 29 100.0 36 ............................. TATATTTAAATGAAACTTCTAATTTTCTAAGGTAGT 202774 29 100.0 35 ............................. TGAATCCATCATCAACATAATAACCTGACGTGATT 202838 29 100.0 37 ............................. TGAATGATTCAGTGACTCGCGTATGGAAAACACGGGG 202904 29 100.0 37 ............................. TAAAGAAGCAGATATTAACGCTTCGTGAATTTCAAAA 202970 29 100.0 37 ............................. TGGAGACGACCGTGACATCCGGGACCAACTGAGAGAA 203036 29 100.0 36 ............................. TTATCGACATATTTGTCCTTAGCGTCTTTATTTTCC 203101 29 100.0 37 ............................. TATCAGACAGGCGCTGTTGATAGGCTGTCAATCCAAG 203167 29 100.0 36 ............................. TTACTTATCTTTGAGCGTTGCTGTTTTCTTTGCAGT 203232 29 100.0 37 ............................. TAACAAGCCAGGTAATACATATACACTGGCAGATCTC 203298 29 100.0 36 ............................. TCGCTGGAATAGTGATGATAGAAATTGAAAATTCGC 203363 29 100.0 36 ............................. TTTATAAGTCAGATAATGGGATGTAGATCTATTGTT 203428 29 100.0 37 ............................. TTTCCAACCGATATTTTGTCGGCATCAACAACACCAT 203494 29 100.0 35 ............................. TGAATTGCTTCGAAAACAGCAAGAGTTCCTATTTG 203558 29 100.0 36 ............................. TGAAAATGAGATTATTATTTGATCAAACTCATTGAA 203623 29 100.0 37 ............................. TTTATCACATATGGTCAACATTACCGTTTATTAAATC 203689 29 100.0 38 ............................. TAAAACAGCTATAAACCAAAACTGCAATAAACTTCATT 203756 29 100.0 37 ............................. TAAAACACTCATAAGCCTCTGTAGTTCAACGGATAGA 203822 29 100.0 35 ............................. TACCGCTACGGCCAAAACGGTAGCAATCACAATGT 203886 29 100.0 36 ............................. TTAGTAATTGACAATGGTTGGATTGATAATCCCGTT 203951 29 100.0 38 ............................. TTTTTGTCAAAAGGAAGTGCCTGCATGTTGATATTACG 204018 29 100.0 37 ............................. TAGTTTTTCGGCTTGTGCTTCAATCGTGGCGTTCAAT 204084 29 100.0 38 ............................. CAAAAAGGAAATTTCTTTAAAGATATAATCCATGTTGG 204151 29 100.0 37 ............................. CTCTACATATATCCAGCATTGAAACTGATCTGTAGCA 204217 29 100.0 37 ............................. CCAGGTTTTGTATATTCTCGGCTCGCTGATCGGCGGC 204283 29 100.0 36 ............................. CAAATACAGCAGGAAAAAATAAAATTGATTACCTCA 204348 29 100.0 36 ............................. CATAATCCGATCGTCTATCTTCGCAAAAGTACGAAA 204413 29 100.0 36 ............................. CAAAGTTCCTATCTCCAGAAAGCGTGCTCTGGATCC 204478 29 100.0 39 ............................. CGAGGGAGAGGTAACACTTAGACCTCTTGGAGAGCCAGA 204546 29 100.0 37 ............................. CACAAGTAGCTGATTTGTAACCACCCCTCCGCTTTGA 204612 29 100.0 37 ............................. CATTATAGTCTCAAACACGGCTAATCTCGAAGCCGCT 204678 29 100.0 39 ............................. CAAATATACTGGGGCTGGAGTTACAAAGCCATTTTCTTT 204746 29 100.0 36 ............................. CTAACCTCTGATCTTTGCCTGTCGATCTCATTTGCT 204811 29 100.0 38 ............................. CGATCATCCAGTCCATTAATCCTTTTTTCCCGATCTGC 204878 29 100.0 36 ............................. CGCGTAATTCAGGTATCTTCCTATTCGCCGATCATG 204943 29 100.0 37 ............................. CATCAACAACGCTTGACGGATTGGGTAGCTTACGTAA 205009 29 100.0 37 ............................. CTCAATCGATCGCGACGCTTTCTTATCGGCCTTCGAT 205075 29 100.0 36 ............................. CAATTTAATGAAACTCATCTCCCTTGGACGGATGAA 205140 29 100.0 37 ............................. CATTAAAAAAAGAATGGGAATCGCTCGGAGATAGTCT 205206 29 100.0 37 ............................. CCTTCAATACGGGTAACTTGGCCGGCTATGAATTCGA 205272 29 100.0 38 ............................. CCGGGAGATATTGACGGTATTACTTCATTAACGACTAA 205339 29 100.0 37 ............................. CCTTACAATATTCCCAATATCCGTATTTGCCGTGTTG 205405 29 100.0 36 ............................. CTAAGCCGTGATCAAACAGCTTGTCGGAGTATCCAG 205470 29 79.3 0 ..................CCA..C...CC | ========== ====== ====== ====== ============================= ======================================= ================== 74 29 99.7 37 CTACAAATCAGACCAAAGTGGAATTGAAA # Left flank : AGTTATTATTTTATGTATGTCATTTTAGTATATGATGTTGGTGAAAAGCGGGTGGGCAAGATGCTGAGGCTATGCCGGAAATATCTTAACTGGATACAGAACTCGGTGTTCGAGGGCGAAATTACTGAAGTGAAGCTACATGAATTGAAAATAAAGGCGGGCGATATCATGCATGAAGAAGAGGATAGCCTGATTATTTTTAAAAGCCGAAATGAAAAATGGCTTGACAAGGAAATTATTGGGAAAGAGCGCAGTAGCGTAGAAACTTTTTTATAGCAGATTGTCGAATGCAATATACGAACTCCTTTAGGCAGTGCAAAGGATCAATAAAATGGGACTGCGAGATCTTTGACATTCTGAATAACAATTCATTACATTATATTGTCGAAACCCCGGGCAAAACATAGAACCGGACATCGACAACTTCGGCACAAGAATAAGCGGTTGAAAGCATCACTGAAATGCCCTAAAATCGCTTATATTTGTGCTCGAATTAACGA # Right flank : CGGAGTATATAATATGAGTTATTATTGTATCTTTGTGGCAAACATAATGTTATATACCTGTAATTTGTATGTTCTGCAATAGGTGTCTAACATGTGATGCTAAATAGAATACCATGGCGAAGTATTATGTCAACAAGCAACCGGAGTCCACAGGTAAACATGAAGTACACCAGTCAGGATGCTCTCATTTACCTTCTATTGGACAACTGGTCTATTTAGGTGATTTTGATTCATGTTCCGAAGCAGTGATAGAAGCTGAGAAATATTTTATTCATGTTGAGGGATGTGAATTTTGTTGTTCAGGATGTCATATGTCCTGATTACAAACATACTCAATAAACCCGGATGACTTGAATCATGCCGGGGGAGGCGGCAGCAAACCGTTTGATTTGTTGCGTACCAAAACACATGGAATGTATTTATCTTTGCATGGAAATTAATAATAGTGGAGGTGAATCATGACAAGAATAGTGGCTTTACCTGTCCGGTTTAATGCCGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTACAAATCAGACCAAAGTGGAATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 2 830294-830802 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHYB010000001.1 Microbacter margulisiae strain DSM 27471 Ga0315740_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 830294 47 100.0 30 ............................................... AAATCGTTTTTCGTGAAATACGAGCGAAAA 830371 47 100.0 30 ............................................... ATTAACCGCCGTATTGATGAATATAGTTTG 830448 47 100.0 30 ............................................... AACGTCATCGCGATAGTTGTTGTGATATGA 830525 47 100.0 30 ............................................... CGTTGTATCCCATACATGGTAGCTACTTTG 830602 47 100.0 29 ............................................... CGTTGAGGAAATCAACCGCCAAAAAAGCA 830678 47 100.0 30 ............................................... AGGACATGGATTATCTTGAAATACCGTTGT 830755 47 87.2 0 ...............................C...AT...A.C.T.. | T [830782] ========== ====== ====== ====== =============================================== ============================== ================== 7 47 98.2 30 GTTGTTATCAATCGGTCAAAGATACAATTCTGAAAGCAAATCACAAC # Left flank : CCTTTGGTGCGTACATACACCTGGTCGCTTCCTTTTATTGTATAAAAAGACAAATTGGTTAATCCTCCCGTTATTTGTAAAGTACCTTTTAACCGTGCCATAGTGTTACTGTTTGGTTACTGTTATCATCATTGCTATTAACTTAAGTGCAAATATACAATATAGCGTAAATAGGTGATACCCATATAGTAAAATATTATGGAGATAACACAGTATTAATAAGTTTGTATTATCACTATTTATTTATTGTGATATCTTTGTAATATAACTGTAAGTTATATATTGATATAGAGAAGTGTCATGGGATGAAACATACTTCAAATAGGGAGGAAAGGTAAAGGAAAATGCTTTAAGCCGAAGACAAAACAGGAAGGGAAATAAAAAAACCTGCAACGTAAAAAGTGCAGGTTTTTATAGATAACATCAATGATTACCGGTTGATTTTTTAATTCTAATTTTTCATGTAAAGTTTTGATTTAATGATTGATAATAGCAGGTAT # Right flank : CTATTGCTCCAATAACTTGAGATAGTAGGGTATGTTTAGATTACATTGTTTAATGTATAGCAATCAAATCCTTCTTTGCATCAGGTGACAACGCGTTGTAATCAACAATGTTCAATGTAGCATTATTTGCAGAGGTAGCGTGATCTAAAGACACATTTATATTTCTGTCTTTAATTGTATACATTGCGCCGGAAGCAGGATCAACTATTAACATTCCGATAAGACCACCTAACAGAATATTTCCAAAATACCATCCATCCAAACTACTGGAGACAGTAACGACTTTCTCTCCAAATCCCGGAGATGATATTTTAATCTGATATAGTTCAGGACTAAAATAACCGGATGATGATTTCATCTTCACAGTAACAGGACTTACACCCTTAAATACTTCAATCCCTTTTTTATTCACTATAGAAATATTCGATCCTACCGGAGAAGTATTAATAGAAACAGGATAAATACTTTTGCTAAAAATAGTAGCACATGAGGGAAACATC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTATCAATCGGTCAAAGATACAATTCTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 3 1992549-1991460 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHYB010000001.1 Microbacter margulisiae strain DSM 27471 Ga0315740_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1992548 36 100.0 30 .................................... TAGGTAATGGAATCAAATCTGTCTCGAATT 1992482 36 100.0 30 .................................... ATCTGTGATCTTGTATTTATCACCGACAAC 1992416 36 100.0 29 .................................... AGTGCGTTGCCCTCTTTTATATTCATATC 1992351 36 100.0 30 .................................... AATGTTAAAGCCTAGTATTTTCATAGATAA 1992285 36 100.0 30 .................................... TTTTTGCATATTCCTCCCCGCATTGCCAGA 1992219 36 100.0 30 .................................... TGTCTTAAATGTAGTTCCATTAAGTATCAT 1992153 36 100.0 30 .................................... AATACATTAATCGTTGTAAGATTGCTAATT 1992087 36 100.0 30 .................................... AGAAGGTCGCAGAGGTACTCAAAGAGCTCG 1992021 36 97.2 30 ...............G.................... TCATGTAGTAGCATCCAGTGCCAAGCTAAT 1991955 36 100.0 30 .................................... CCTTTTGGAATTGTTACCGTAACGCGGCCT 1991889 36 100.0 30 .................................... ACTAAACGACCGATTCGCCATTCTTTCGAC 1991823 36 97.2 30 ........................G........... CTTCTCTACCATGTATTTCACAGAAAGTTT 1991757 36 94.4 29 ......T........G.................... AATTGTCCGTAAGATTTTATGAGATTTAT 1991692 36 100.0 29 .................................... TAGAGCGAAGGACTTTTGCAATGTGTTTT 1991627 36 100.0 30 .................................... GTTGAATCAATTGTAACTAAGTAACTTCCA 1991561 36 100.0 30 .................................... AGAAGGTCGCAGAGGTACTCAAAGAGCTCG 1991495 36 91.7 0 ...........C............G......G.... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 98.9 30 GTTGTAAATGCTCTTAGTTTGAAGAGTAAAAACAAC # Left flank : CTTTGCATACGACCGCCGGTTGCCCGAACTTGTAGCCTATATACCCGATGCCACCATCGACGTTGAGGCTTTGCGCTATGAGCTTGCCGATTACAACCGGGCCCGGCAGGAGGTGTTCGATGCGGTGTTCCGTCTTGAAAAAGCGATTATTGAAAAAGATGCCGAGAGTATCAGAAACCTCTTTACGGATATGGAAGGAAATTACAAAACAGGTAATATCCAACATCGGCCCTATTTACAATGGCTGACCAACAAAGGGAAGATTACAGAAGAAGAGCGATGGTGCCTTAATATGGTACGTAAAAGTTTTTCACACAATCAATTTCCCCATAGAGAAGTAGCTGTAAAATGGAATCTGAACATTGAACCAAAAGGAATCGCAAGCCAATTGGCTGCTGTATTTAAACGCAAAACAGAGGCTATAGTTGACAGCTTCTGATCATACGCTATTTGAAAATACGACTTAACATATTCAATGATAAGAGTATAAACAACACTAT # Right flank : ATTATCCGAAGTGAGTGTGTGGTAGAACCGCACCTTCGCTTTGGATTTTTAATCCAACCCTCAACCTGACACGATGTGCTGAATAAAAACGACAATGCATGAATCCATTGCAGAAAGTTGCCTGCATAAACTACTGTTGAAGCTGTTGAAGGAGAAAAAGATGCCACAAAAAGATAATTAGCGTCCGCTAAAGGAAATAGGATATCTTCGCAAAATAGCTTAGCCTCCGCTAAAGGAAATTGGATATCTTCACAAAATGATTTAGCGTCCGCTAAAGAAAATGGTAGACCTTTGCAAAATGTTTTAGCACCCGCTAAAGAGAACAGGAGGCCTTCGCAAAATTATTTAGTGCCCGCTTAAGGAAATAGGATATCTTCGCAAAATAATTTAGCCCCAGCTAAAGAGAATGGTAGGCCTTTGCAAAATAGTATAGCGCCCGCTTAAGGAAATTGGAGGCCTTCGCAAAATGTTTTAGCGTCTGCTAAATATAAATTAGCATC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAAATGCTCTTAGTTTGAAGAGTAAAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.20,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //