Array 1 528759-524948 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLVP01000008.1 Desulfovibrio psychrotolerans strain JS1 sequence08, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 528758 29 100.0 32 ............................. CGGGTTGTGGTGAGCCATGGTTGAGAGACCCT 528697 29 100.0 32 ............................. GTTTACCACTCTGCTTGCCCGGCTGCGGGAGT 528636 29 100.0 32 ............................. GACTACGTTGATCTGAAGGAGCGGGAGATAGC 528575 29 100.0 32 ............................. CGCCCCAACAGCCTCCGGCGTGTGCCAGTCGT 528514 29 100.0 32 ............................. TACAGAGATGGGGAGTGGTCCTTGGTACGTAG 528453 29 100.0 32 ............................. TGCCCGTGCATATGAGATGATTTCATCTACTC 528392 29 100.0 32 ............................. AACGGAATCAATGGGGATGTAAACAGCGAAAT 528331 29 100.0 32 ............................. CAGAGCAAGACCACCAAATATCAGGCGCTGAA 528270 29 100.0 32 ............................. AGGCCGTATTTGGTATAAAATCCAAAAATGAG 528209 29 100.0 32 ............................. CAAAAAATCCGCCGCCCCCTCCCTTGAAAGCT 528148 29 100.0 32 ............................. GTGTACACCCGCGACCGTACCGAAGGGCCGTG 528087 29 100.0 31 ............................. CCTCGGACTTGCGACCGATGGTGTTGGTGGC 528027 29 100.0 32 ............................. ATCGAATTTGTATGGGCCACCGAGGATCCACA 527966 29 100.0 32 ............................. GGCATCCAGAAATTCCTGAGTCACATTGGCCG 527905 29 100.0 32 ............................. ACAAAGAGTCTCGGTGCGCACAAGAAGACCCT 527844 29 100.0 32 ............................. CGTTAGTTATACTTCACTTTTGCGGCGGTAGA 527783 29 100.0 32 ............................. AGAAATCTGAAACTTATTGACTTCCGGCTCAT 527722 29 100.0 32 ............................. TAATCAGAACTTGCACGATGAGCTTCATCGAT 527661 29 100.0 32 ............................. CAAATTCAGCTTGCCTCCGGGCCGTGTCCATT 527600 29 100.0 32 ............................. CCCACAATCACCACCAGCGCCACCGCTCCCGT 527539 29 100.0 32 ............................. CAGGCTCAAGGGTCAGGAGTCAGAAGCCTTTT 527478 29 100.0 32 ............................. TAGTAATGGCAATGCTAATGACAACTGACCCT 527417 29 100.0 32 ............................. AGCTTGCCCAAACCGAGGAAGAACGCGCGTTG 527356 29 100.0 32 ............................. TTGCACCAGCGTCCAGAGACGAAGGCGTTACC 527295 29 100.0 32 ............................. GATCGATGAGCCTTGCCCCATATGGGAAAAGG 527234 29 100.0 32 ............................. TCGCAATGCTCTCCTCTCGCGTCTGCGTAGTA 527173 29 100.0 32 ............................. CTACTCACGCCATACTTAGCAAGCGCAGTTTT 527112 29 100.0 32 ............................. CGCCTCTTGGTTTCCTGTCTCGCTGCGGTTGT 527051 29 100.0 32 ............................. AACATACTGCCCGTCAACTTCGTCAATCCAGC 526990 29 100.0 32 ............................. GTTAGGGACATCGGGATACAGATGTGCCAGAA 526929 29 100.0 32 ............................. GTCTTCCTCCAGCGTTGGCCCGTCGCCACAAA 526868 29 100.0 32 ............................. GCTATGACCTCGTCAGACGGTATTGTATGGAC 526807 29 100.0 32 ............................. ATGATCCAAACGGCCAATACATGATCTCGGTA 526746 29 100.0 32 ............................. GTAGATAAGGGGTTGAAGGCAAAAGCAAAAAA 526685 29 100.0 32 ............................. GCCCTTGCCCACATCTCCGACGCCGGGCACGG 526624 29 100.0 32 ............................. CAGGTGGAATAAGCTCCATTTTAGCGAGGTAT 526563 29 100.0 32 ............................. TTGTTTTTCCGCAGCCTCGGCGCGGGGGTATA 526502 29 100.0 32 ............................. AACATGCCCCGGTTATCACGCGATACGCTTCA 526441 29 100.0 32 ............................. ATGTTGCCGAGCTTATTGGCGTTACCAAATAT 526380 29 100.0 32 ............................. TATTTGTTCAGGAATCGGGGTTGCAGAATCAG 526319 29 100.0 32 ............................. CATGGATGTGAGTAAAGCCATCGATAAGGCGG 526258 29 100.0 32 ............................. AACTCTCCGCCATTGATCTAGTCCAACTCCAC 526197 29 100.0 32 ............................. TCCGATAATTGACCAAAACATAAGTATCGTAT 526136 29 100.0 32 ............................. GGTCGCACCAGATACCGCACGGCGGAAGGCAA 526075 29 100.0 32 ............................. CGGTATTACAAGGCAATGGCCGATTGCATGGA 526014 29 100.0 32 ............................. CAAAATGCTCTTTAAAAACCGGGTACTCAATG 525953 29 100.0 32 ............................. CGGCTGTTGCTGGCCATACAATCGTATAATGG 525892 29 100.0 32 ............................. CCATCCGCCCTTATGCAGCAGGTCATCCAGCT 525831 29 100.0 32 ............................. GTTGCGGCACACAATGCGGTTTTTCGGAGACT 525770 29 100.0 32 ............................. GGCACAGATGGACGGTCAGCACGTTTTTCGAT 525709 29 100.0 32 ............................. CGTGTCAACAGGGAACGACAGTGTGCGCGCTT 525648 29 100.0 32 ............................. CGGTATTACAAGGCAATGGCCGATTGCATGGA 525587 29 100.0 32 ............................. AACACTTATGCTCTGAGTGTTTGCAGTTATAT 525526 29 100.0 32 ............................. GAACAGCAAGGGGGGCATGACGGGCTATACAG 525465 29 100.0 32 ............................. ATGATGGCGTGGAAGCGCTGGCATGGTCCTTT 525404 29 100.0 32 ............................. GCCGCTGTTGTTGCCGTAAACGGAGCACAAAA 525343 29 100.0 32 ............................. AGTTGGAGTCTGCAAAAAAACAGATGAGCGAG 525282 29 100.0 32 ............................. TCCGAACATGCTCCAGAAATTTACCAATCTGT 525221 29 100.0 32 ............................. TGGGGCCGCATGTTGCCTGTACGCATTGAGCA 525160 29 100.0 32 ............................. TTTAATGGTCCCGGCTCCGTCTTGCTGTGTCA 525099 29 100.0 32 ............................. GCGTACATGGGCCTGAAGCTGGCAAACCCCCG 525038 29 100.0 32 ............................. CGATACCAGCGTGCTCTCTCACGTCCGCAGAT 524977 29 93.1 0 .........................A..C | T [524953] ========== ====== ====== ====== ============================= ================================ ================== 63 29 99.9 32 GTGTTCCCCGCACCCGCGGGGATGATCCG # Left flank : AACGCATCATCCCCACAATTGAAGAGGTGCTGGCAGCAGGCGAGATCACGCCTCCCAAAATTGAGGGAGTGGTTGCCCCCGCAATACTAGATGAGGAGGGAATTGGCGATGACGGTCATCGTGGTTGAAAACGTGCCTCCCCGTCTGCGCGGGCGTTTAGCCGTTTGGATGCTGGAAATCAGGGCCGGAGTCTACGTGGGGTCATTTTCTGTCAAGGTCCGCGAAATGGTCTGGAAGAACGTAGAAGTGGGCATTGGAGAAGGAAATGCCGTCATGGTGTGGCGGGCACAGACCGAATCCGGCTTCGACTTCCTTACACTGGGAGCAAACAGACGCCATCCTGTTGATTTTGATGGAACTCCTCTGGTTTCATTCTTTCCTTCTCCAGAAATAATTGGCCTGTAAAAAATATACAATGATCTTTGACAATTACAGAGAGACAAACTGGTAGTTTTAATCTCTTCATTTTTTGCGTAGTATTTCCGTGCGTTAGAAATGGA # Right flank : CACCGAAAGAGACATTCAAAAAATCGAATTATCTCGTAAACCCGGATGAAGATCGCCCTCAAAGCTCAGTGGAAATGTTAGAACGGGGGAATATGGTGAAAGTCCATGAAACAAAAAGGCTTACGACCAATTTGATCATAAGCCTTTGTTATTCCTTGGTACCCAGGACGGGACTTGAACCCGTACAGCCCGAAGGCCGAGAGATTTTAAGTCTCTTGTGTCTACCAATTCCACCACCCGGGCACGGGGAGTCAGGCTTCGTAGTATGGAGCGCAGGGTCGCGTCAACCATCTTCGGCAGGCGCAGAAAAAAATCCTGAATCCCGCCCGGCGGATAGCGGCAATCATTCCTGCGGGCCGGGCAAGGTGCAGTCCGTGTGGCAGGCCCTCATGGAAATATCCATGGCCGCCTCCTTCCATCCGTTTTCAAAAAAACAATACAAATGCACCACATGCAAATCCTTATGCACGCACAGCAGCCGCCCCTGCACAGACTTGGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //