Array 1 54-1538 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAIP01000005.1 Legionella pneumophila strain D797 D797_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 54 37 100.0 35 ..................................... AAAAGCTTGGGTCTGGCAACTTGGCGAGCAGTATG 126 37 100.0 35 ..................................... TAGTAATACATCCGGCCCATTATGTCACAAATAAT 198 37 100.0 36 ..................................... GTTTGTCACTCGCGGCACTCCTTCATTGTCGTAGTT 271 37 100.0 35 ..................................... TTACATCTAAGGCAGTCTACCCCAGTACACGGTGA 343 37 100.0 36 ..................................... CACTAGTTATGATTGACTTAATAGATAGTTGTATAA 416 37 100.0 35 ..................................... TGTCTGTAAATTGGGTAAAAAAGTCTTGTATTGTT 488 37 100.0 37 ..................................... TCTAAATTCGACAAAAATAACAAAAAACAAATTTGGA 562 37 100.0 35 ..................................... AAAATTGTGTTCCGCTGCTCGACAAAATTATTTAA 634 37 100.0 34 ..................................... GGTAAGTAAAAGGTGAATTAATACCATAAATGCA 705 37 100.0 34 ..................................... TGGGACTGTCCATCCATAATCAATTGGGCCAATT 776 37 100.0 37 ..................................... TTCTACCGATATTTCCCACTATACCTATATCATAAAG 850 37 100.0 35 ..................................... TTCGAAATTAGTGTATTAGTCATAGCTAATAGTGT 922 37 100.0 37 ..................................... GACTTAGTAGAAGAGGAAACTAGAGGAAAAACTAAAT 996 37 100.0 33 ..................................... CACTTAGAACATAGCTTTGATTCTGTTGGTGTG 1066 37 100.0 34 ..................................... AGACATGCTAATCCTTTTAGGCCATATCAATGCC 1137 37 100.0 36 ..................................... ACAAAACTAGTCAAATGCCCCGCACCAGACATGGCA 1210 37 100.0 36 ..................................... TTTTTATATAATAATCCTATTCTGCTAGGTTTAATT 1283 37 100.0 37 ..................................... ATCCTGTAATATTGTCGAATACGTAATTAATCTCAGG 1357 37 100.0 36 ..................................... ACTTAGCCTCAATTCCCAAACCTCTGTGGCCGATAC 1430 37 100.0 35 ..................................... ACTTTATTAGATATGACTAATATATTAATAGCCAA 1502 37 81.1 0 ....A......C...........TT...T.A.....T | ========== ====== ====== ====== ===================================== ===================================== ================== 21 37 99.1 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : AATCCAACCACTGAAACCACCATAGATGTTACGTTAGATCAAAGTCATTTAGGC # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAACTCCATGGAGTTATTATTTATATAATCAAACTGTCGTAACTCCATGAATGTGACACTTTCATGGAGTTACGACAGCTGTTATGTTTGCTTGTTTTTCATCTTATTTGCTTAATACCTCAAAACTTATGGTCGTTGGATACCGGATAGCTCTTCTCAATCAGATTATCATCCGATGCATGATTGGAGTCTTTATTTAACAACCCCGCCCAAAATAAACCAAATTATATTAAAATTGAACTTTTAATGTGGTATAATCGCGAGTCTAAATTTATGCACACCTATAGTGGAATTTCAAATGAAATATATTTTATTGCTGCTATTTAACATCAGCTATGCTCCAAATCATCCTGTAGTGACAACTAGTCTTGAATTTAGTACCCAGCAAGCCTGCAAAGACGCAGGTAAACAAGTTCAAGAACTCACAAGAACCCGTAATGGCTCTGCAGTGCCCGATTTTATTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //