Array 1 2267480-2265857 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031290.1 Lacticaseibacillus rhamnosus GG chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2267479 36 100.0 30 .................................... AAGAAACGATCCCGAGTTTCTGGATTGCTT 2267413 36 100.0 30 .................................... TCATCAGTATTCATGGAAATATAGGATGCT 2267347 36 100.0 30 .................................... ATCATCGAATCTTTGGGGACCTTACCACTT 2267281 36 100.0 30 .................................... GATTGTTTCGGTTGCTTCTGTGATGCCACC 2267215 36 100.0 30 .................................... ATGACTGGTTGCCGGTAAGCGATGAGTTCA 2267149 36 100.0 30 .................................... CATACTTGTATGAGCACTTTGACTTGTCAA 2267083 36 97.2 30 ....................T............... ACCGTTTGTGTTGCATGAATATGATCACTA 2267017 36 100.0 30 .................................... AGGTGCTATGCCGCTTGGCATGACGATTGA 2266951 36 100.0 30 .................................... AATAATATTGTGCCAAAAGGTAGTATTCTA 2266885 36 100.0 30 .................................... TCCAAGGGCATTCCAGATTGCAGAAGCCCC 2266819 36 100.0 30 .................................... GGGTGATGCTGACAAGATCAAGACGGCTGT 2266753 36 100.0 30 .................................... CGCCTTACGGGCGACAGCTAGGCCTATGGG 2266687 36 100.0 30 .................................... AGATCGAGCATTACGGCTTGCAAGACTGCG 2266621 36 100.0 30 .................................... ACAGTTGAGAAAAGAAAATACGCATTTAAA 2266555 36 100.0 30 .................................... AAAAACACAAATGGCCGCTGCCACCTTATG 2266489 36 100.0 30 .................................... AAAAAAGCCGCGGAACTTCTCGGGCTAGAC 2266423 36 100.0 30 .................................... CACAGTGCCATTCCACAAACCCGACAGAAA 2266357 36 100.0 30 .................................... CGAGCTTGCGGCCAATATCAAGCTATATGC 2266291 36 100.0 30 .................................... GTGTGATCATCATTACCTCTCTGCCACTAA 2266225 36 100.0 30 .................................... ATCGCATACTTCATGATGATTGATGCCAGT 2266159 36 100.0 30 .................................... CTGTGTTCTCACGTGTCAACAATTATTTCA 2266093 36 100.0 30 .................................... TTGTGGTGCCAAAACGGGTTGTTGTCGAGA 2266027 36 97.2 30 ...................................G TTTCAGCAAATATGACGTCTAACATGCCTC 2265961 36 94.4 30 ..................................AT ACTTGGAAAAGTTGCTATGCAGTTTGAATA 2265895 36 83.3 0 .......................AA.A....G..AA | T,CA [2265860,2265866] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 98.9 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTCCAACGCTTGATCATCAAGAAGGTAAGTCAATTGATAGAGGATCGGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTAAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTGAACAAGCTGTTAGATCAGGTTAAGGAAACATCGTTAGAATTACTTCTCATTGAATTTTCGGATGTCGAACGTAGAAAGTTTTTTGAGAGGTGCCAGTATATCTATATTGACAAAGATTTCATGGATAGCCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : CCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTATCAACAGGCGTTCAAATCCATTTACGACAAATATCAAGATCGGGAAACCAACCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAAGTTCAAACGGCATAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGTCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCTAAATTGGTACATTTGTATCGTAAAGTCGGCTTTCAGCAGCTGCCAGATCGGGAAACAACGATTAATGAGCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //