Array 1 98778-102907 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMVJ01000009.1 Parenemella sanctibonifatiensis strain NML 150081 NML150081_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================== ================== 98778 29 96.6 32 ............................G TCGCAGCGGGTAGCGTCAGGTTGAGGGTCTGG 98839 29 96.6 32 ............................T GATGAGCCGTCCGTCGGGGGTGTTGATGAGGC 98900 29 100.0 32 ............................. TCGCTGTGGCGGCACCTCCGCCGCCGCGGCCG 98961 29 100.0 32 ............................. TCGGTCCACTTGCGGAACCCGGCGACGTGGGT 99022 29 96.6 32 ............................G GGGCGGCTCGACCTGGGATCAAAACAAAGGGC 99083 29 100.0 32 ............................. GGAATCCACAGCGGATGAGCTGCCAAATGGTC 99144 29 100.0 44 ............................. TGCAACCGGCGCAGGGACCGGCCAGGGCCGTGGGGCTGGTTGAC 99217 29 96.6 32 ............................T CCCCGCACGGTCCGGGCGTGGGAGTCCGGCAG 99278 29 96.6 32 ............................G TTGGAGCGCCGCATCGCGTCCGACTGGCCCGA 99339 29 100.0 32 ............................. TTGACACCGCGTCAGTTGAGATCCATGCCATG 99400 29 100.0 32 ............................. TCCAGCCGCCACCGCGAGGTCGCCTTGGTGCT 99461 29 100.0 32 ............................. CGCACCGTGGCCGCCGCCGCCGCACAGACAAG 99522 29 100.0 32 ............................. TGCTCGGCCCTGCCGCCGACCAGCTGTCTGAC 99583 29 100.0 32 ............................. TCGGGCACGTCCACCGCCGAGGTGCCTGCCGT 99644 29 100.0 32 ............................. CCATGACGGGTTGCGGGGGAGTTGTCGTGACT 99705 29 96.6 32 ............................G CGCACCGAGGCATGGGGACGGCCAGCAAGGAC 99766 29 93.1 21 ...........................AT CGGCGCAGACGGCGGCGAGGC Deletion [99816] 99816 29 100.0 33 ............................. TGACCCCGAAGACGAAAAAATCCCCCGCAACCC 99878 29 96.6 32 ............................G CGCACCGAGGCATGGGGACGGCCAGCAAGGAC 99939 29 93.1 21 ...........................AT CGGCGCAGACGGCGGCGAGGC Deletion [99989] 99989 29 100.0 33 ............................. TGACCCCGAAGACGAAAAAATCCCCCGCAACCC 100051 29 100.0 32 ............................. GGGGGCGTAGCGTTCACTAACAAGTCGATCGA 100112 29 100.0 32 ............................. ACCCGCGAAGCGCTCGCCTCTGAGTTGCTGCG 100173 29 96.6 32 ............................G CTCGAACGCCGCATCGCGTCCGACTGGCCTGA 100234 29 100.0 32 ............................. TTGACTGGCACTCTGGATCACCCCCGCCGGTT 100295 29 100.0 32 ............................. TAGCGTCGATCTCGGTCCACCTCGACGGCGTC 100356 29 96.6 32 ............................T CCGACCCTTCACGCTGCTCGTCCAGCTCGACA 100417 29 100.0 32 ............................. TGTGGTGGATGTGGGAGCGAGCTAGCCAGGGC 100478 29 100.0 32 ............................. GGCATCGACTCGCTCGGCGCTGACCTCGTCAA 100539 29 96.6 32 ............................G CGGCTGTCACCGGACGCCTACCAGCGGCTGCT 100600 29 96.6 32 ............................G TACCAGCCCTACTCCGACGACACGAAGGTGAA 100661 29 96.6 32 ............................G CACCAGCTCCCGACACCGGATTCAGCGGTGTG 100722 29 100.0 32 ............................. TGTTGGCTGTACAGGACGGTTTCGCACAAAAG 100783 29 100.0 32 ............................. GCCTGCACCAGAGGTCTCCAGCGACATGCGCA 100844 29 96.6 32 ............................T GTCGGCGGACAGCTCGCAGTATCGGGCGGCGG 100905 29 96.6 32 ............................T GCGTCGCCCAGTCCTCGCCGTTCAGCGTCTGC 100966 29 96.6 32 ............................T CAGACCGCGCTGGAGCCCGCCCGGATCATCAA 101027 29 96.6 32 ............................T CACGAGCTGATCAAACGGCAGCCACGCCGCGA 101088 29 100.0 32 ............................. ACTCGACCGTCATCGACTGCCCCGACGACGGG 101149 29 100.0 32 ............................. CACGCCATTCCTCGTTCGAGTCCTGCCCTCGA 101210 29 100.0 32 ............................. GGCAACTGGGCGGCCCGTCAGATCGGCCTGTC 101271 29 93.1 32 ..G.........................T CCCGGATCAGGGACTCAAGCATCTGGACCAGA 101332 29 96.6 32 ............................G TCGCCTTATGAGGTGATGATGGGCCGCTTCAA 101393 29 96.6 32 ............................T TGCAGCCGCTGCCGTGAGGCGCGCACACGGTG 101454 29 100.0 32 ............................. GCCTGGGAGGACGTGTCAGACCTGTCCCGTGC 101515 29 100.0 32 ............................. GGACCCCGGGGCGGGTTGCTGGCGGACGTACG 101576 29 96.6 32 ............................G TCTTCCTGCCCGACGGCAGCTCCGCCGGGTCA 101637 29 96.6 32 ............................G ATCGCCCACGGTCTGGATCGGGGGCAGGCCGG 101698 29 100.0 32 ............................. ACTGGCGGGTTCAAGCCCGTCCCCACACCCGC 101759 29 96.6 32 ............................G GCCCTGAAGGCTGGACCGTCCTCGCCACCGAA 101820 29 96.6 32 ............................G GTGTCGTCCTGCACGGCACCGCCGCTGATAGC 101881 29 100.0 32 ............................. CCGGCCCCCGCGATCCGAGGACTCGCCATCAC 101942 29 100.0 32 ............................. CCGGCCCCCGCGATCCGAGGACTCGCCATCAC 102003 29 100.0 32 ............................. GGCATCGACTCGCTCGGCGCTGACCTCGTCGA 102064 29 96.6 32 ............................G CGCACCGTCCGGGACCCCGCTGTTGCTGCGGA 102125 29 96.6 32 ............................G GAACTGACGTTCTGATCGTCTCACGGTTGCCT 102186 29 96.6 54 ............................G TCGTTCCCTCTCTGTCAGGCTGCGGTTCACCGAGAATCGGTCACCGCGCAGCAC 102269 29 96.6 32 C............................ GGCAAGTGGCGCTACCTCTGCGCCGACCATCA 102330 29 96.6 32 ............................G AAATCGCGGCCGTGTTGGAACGTGGCCGTGAC 102391 29 100.0 32 ............................. GTGAGAGGACTCACCAGTGCAACAGCCGATAG 102452 29 100.0 32 ............................. TCGCGACGATACCCGCCGGAGCCGATGGCCTG 102513 29 96.6 32 ............................G GCATTCAACGTAGGGACCATCCCTACGACCAA 102574 29 96.6 32 ........................C.... CGCTTCCAGTCCCGAATGATCGCGACCGTGTC 102635 29 96.6 32 ............................G TGCAGCACGACCGTCTCCGCGTCAGCGGCTTC 102696 29 100.0 32 ............................. CTGTTCCAGGCGTTGGTGCCGGCACTGCTGCC 102757 29 100.0 32 ............................. ACCGGGTGGAGGTCAGTGCCGCGCTGCACCTC 102818 29 96.6 32 ............................G TCCACCGCTGGATCTCCGTCCAGGTCGACCGG 102879 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ====================================================== ================== 68 29 98.1 32 GTCGTCCCCGCACACGCGGGGATCTTCCC # Left flank : GCTCGGCCATGGTGCCAATCTTGAAAGATCTTGAGGTTTGAAGGCGGCACGGACAGCCCGGCGGACTCGATGCCGGACACCAGATCGTCACGACCGATGTCCCGTGCCTTGACTTGAAAGGCCGGGGTGGCCTTGCCGATGTCGTGAAGTGCGCTCAGTGTCACCAGGAGCTGTTTCCCGTCGCCGTTGCCGGCCGCCGCCGCGAGGTGCTCGCGCGCAGCGGGGGCCAGGTAGTCCGTCCAGATCAACTCGGCCACGGCCGCGGTGTCGAGGAGGTGCCCGACGAGCGAGTGGGGTTTCCCGCCCGCGTCGGACTTGGCCCACAGGGCTGACGCTGCCCGTTCAATGTCCATGGCCGCATTGAAGCAACAGTCACTGACAAGTTTCGGGCCGGCGGTGCGGCTCAGAGTGGTGGGGTAGTGCTTGCATTGCTGACGCTTGGTGCGAAAGACTGCTCATGAAGGAGCTGCGGATTCCAGAAGAAATCCGTTTCGCCAAGT # Right flank : TGGGTCGTCAATGACAACTAGGTGTACTGCCCGGAGACGTTGATCAATCGCGAGAAGGGCGGGAGGTTCCCGCAGGCCGTGTGCGGCCGGTGATGGTTGTAGTAGTGCAGCCAGTCGTCCAGCTCGCCCCGTCGTTCGGCTTCGGAGGTGTAGCAGCGGGCGTAAGCCCATCCGTCGGCCAGGGTGCGGTGGAAGCGCTCGATTTTCCCGTTGGTCTGCGGCCTGTAGGGCCGGGTGCGCTTGTGCCGGATACCGAGTTCGGCGCAGGTGTCGCGCCACAGGTGTGAGCGGTACGCGCCGCCGTTGTCGGACAGGACCCGCTCGACGGTGACGCCGCGGGCGTTGAACCACTCGACGGCTCGGACCAGCACGGCGGTGGCAGTGCGGGCGGTTTCGTCGTCGTGGATCTCGGCATAGGCGACGCGGGAGTGGTCGTCGATGACGGTATGGACGTAAGCCTTGCCCATCAACGGGTCGTAGTGCTTGTTCTTCGGCTTGTC # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACACGCGGGGATCTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGTTCCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //