Array 1 1625371-1626419 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR881936.1 Enterobacter cancerogenus strain UPC1 chromosome UPC1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1625371 28 100.0 32 ............................ CCCACCACCATGCTCACGAACTACGCCCAAAA 1625431 28 100.0 32 ............................ TGGATGGGGCGAACAAACAGACGGCTCTCAGG 1625491 28 100.0 32 ............................ TGGCGCGCATTCTGGAGGCGAACCTGATTGAG 1625551 28 100.0 32 ............................ GATGGCGCACCGGTTGCAGGGTGGCTGATGAT 1625611 28 100.0 32 ............................ TCAAAGACGCAGCAGAGTTGCGCGCGCAGCGT 1625671 28 100.0 32 ............................ ACTCTGGGGGCTGCGGTATGTCTTTTGTCGGG 1625731 28 100.0 32 ............................ ACTCGCACCACGACTACGGGCGGGTGTATTGC 1625791 28 100.0 32 ............................ TTTGGGATAACTGGCAGAAATTTAACGGAAAG 1625851 28 96.4 32 A........................... ATCCGTACCCGTAATCCTTATAGACGAAAACA 1625911 28 100.0 32 ............................ TGCCTTTACGCGCCACGATCCCGACAGTATCT 1625971 28 100.0 32 ............................ TGGCCGGGGGGATGGCTGGGGTATTTGCAACA 1626031 28 100.0 32 ............................ TGCGTGGAATTTGGCCGTCAGGGTGTCCCACT 1626091 28 100.0 32 ............................ GGAATCAATGAGTTGCGCCACGCTTTTGAACA 1626151 28 100.0 32 ............................ TGGAAAATTCGATATCTCAACCAGCGCCATAC 1626211 28 100.0 32 ............................ ATACCGACCGTGAGATAAATACGGCGGTAAAT 1626271 28 92.9 32 ...........T.C.............. GAGCAGGGCAGCGAGTTTAGATTGACCATACT 1626331 28 92.9 33 ...........T.C.............. GGACGGCCAGCACGTTGCTGCACGAAGCGGATT 1626392 28 82.1 0 .......A..CC.CC............. | ========== ====== ====== ====== ============================ ================================= ================== 18 28 98.0 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : CCCGCACGATCCCGCACAGACCGCCAGTTCACCCGTAAGCTGCGCTTCTGCGCCTGCGGCAAAGGCGGCAACCTCCTCATGGCGGGTCGGCATCCATTCGATGGTTTTCATCTTATTGAGGCTGTCGCTGAGTCCGTTCAGGGAATCGCCGGTGACGCCCCAGATACGTTTTACGCCAGCCTGTTCAAGGGTTTTCGCTATGTAAGCAGCCACGGTTTGTTTCATGGGTGTCCTTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGGCGCATTGCCCGTTAAATCCCCCGCTGCGCACAGCGATTTGCGGGAGCGTGGAGGTGTTGTTCATGGGGAGCTGCTGCGCCAGTGCGGGTGAAAACCCTTTTTTTAGAGCATGTGTAAGCTGTTGATTTTTCATGGGGCGGTGGAGGTGCCTGGAAAAAGGGTGTGCAGAAGAAAGTGAGGGGATAAGATTTATTTTACAATGAGATAGGTGTAGATTGTGTGA # Right flank : ATCCCCACCGCACTTCCCGTAGGTCGGGTAAACGCAGTGCCACCCGACAAAAAAGCCCGGTGCGCTAACGCTTACCGGGCCTGTGAGCGAACCTTTACGTTTTATGCGAGGACAAGATCGCCCTGCGGATGACAGGAGCAGGCCAGTACGTAACCGTCGGCGATTTCTGCGTCCGTCAGCGTCATGGTGCTGCTCACGGTATATTCGCCGGAAACCACCTTCGTCTTACAGCAGCCGCACACGCCAGCGCGACAGGCCGCGACTACCGGCACCTTGTTGCTTTCCAGCGCTTCCAGCAGCGTGGTACCCACGCGACCAAAGAAGGTTTGGGCAGGTTGCAGCTTAGTGAACTTGATCCCGCTGGTTGCCGCTTCGGCGACAGGTGTGAAGAACTGCTCTTTAAAGAAGCGGGTCACACCCAGCGCTTTAACCTCTTTTTCCACGATATCCATGTACGGCGCAGGGCCGCAGGTCATCACGGTGCGGGAGGCAATATCCGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1640747-1641377 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR881936.1 Enterobacter cancerogenus strain UPC1 chromosome UPC1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1640747 28 100.0 32 ............................ ATGAGCGACGATCCAGCCATCGCACCCAGCGC 1640807 28 100.0 33 ............................ AAAATCATGTAACTGCAGCATTAAAACAAATGA 1640868 28 100.0 32 ............................ ATCTGATGCAAGAATTCTTCAATGTTTGAGGA 1640928 28 100.0 32 ............................ ATATTGTTCTATCCCATAATGAAACTGGTTTT 1640988 28 100.0 33 ............................ GCGCGGAGACGGCCACTGCAGCAGCTGGCGCAA 1641049 28 100.0 32 ............................ ACAAAGACGGGAAGGTGACGGGCGACATGTAC 1641109 28 100.0 32 ............................ ACTGATAGTCATCTGAAGCGTAAATCGGCTGA 1641169 28 100.0 32 ............................ CTGACCAGGAAAACACATTCCTGATTGACGAT 1641229 28 96.4 33 ............G............... ACTGACAGCAGGCACCTACTGGGTTAAATGCAC 1641290 28 100.0 32 ............................ AAAAGCTGTACGCACCGTTATCCAAAGCAACT 1641350 28 92.9 0 .......................TA... | ========== ====== ====== ====== ============================ ================================= ================== 11 28 99.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TGCGATGGGCGCGCGTCCGATGGCGCGTGTGATTCAGGATAACCTGAAGAAACCGCTGGCGAACGAGCTGCTGTTTGGCTCGCTGGTGGACGGCGGCCAGGTCACCGTAGCGCTGGATCAGGCCAAGAATGAACTGACCTACGACTTCCAGAGTGCGGCGAAGCACAAGCCGGAAGCGGCTCACTGATTTAAAACGTCAGTCTTAAAAACCGGGTGAAAGCCCGGTTTTTTTATGGCTGGACAGAACCCATTTATATTGCGCGCGCATCTGTCTCCTTTTCTATAAAAGGAGAGGACGAGGTGAGGGGGATATGTTTGGGGTGGGGATTATGGAGGTCTCTAAACTTTTCACTTTCTGCATTTATGGGAAAACCTTTTTTTTTAGCCCTGTCGTAAGGTATTGATTTATGGTTGGGTTATTTGAATGCTGAAAAAAGGGGGGCAAGCAGGAATATTGCTTTTATTTTTCTTAAACAATAGGATAAGTGAGTTCTCTTCCA # Right flank : AATAAACCAGCCGACAGTGCGCCGCCCCGCTAGTTCACCGCCCTGCAAACAAACCATAAATCCCTACAAACCCACGACAGTAATTCATCACCATAGATAATATATTCAATCAAGAAATTAATCATTTCTCTCAATATCATTCATCCACTCATCACACCCATATAAAAACGAAAATATGTATATTTATTTTGTATGGATAATTTATTTATATGAATGCCAATAATGATTAATAACAAAATTAAACAGTTGCGTGCAAAAATACCTGTCAACATCACGACTTATTTGAAATAGATCACATCCAGGACCTGCAAAATGCCGATACCATAAACGCCATTGATATTTCATTTGATGTATTTTATGTCGCAGCCAACTATTACCCCCTCAGATTTGAAAACGATTCTTCATTCTAAACGTGCAAATATCTATTACCTGGAAAAATGCCGCATTCAGGTGAACGGTGGGCGGGTAGAGTATGTCACGCAGGAAGGTAAAGAATCGTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //