Array 1 12766-10696 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBX010000123.1 Acinetobacter bereziniae strain KCJ3K360 NODE_123_length_12993_cov_11.069252, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 12765 28 100.0 32 ............................ TAAGTTCAATGCCCGGGGTACTCCTTTCAATG 12705 28 100.0 32 ............................ ATCCTTTTCGAGCGAGCGCACAACCAGTACCA 12645 28 100.0 32 ............................ ATGAACCGATCGAAAAGAGTAACTGTAGTAAT 12585 28 100.0 33 ............................ ATTGCTTCACCTACCTCACCAACAAAGTTTTCA 12524 28 100.0 32 ............................ TAAATTGGCTATGCATTATATTCACATTTCTC 12464 28 100.0 32 ............................ CGCAGGGTCACCAGTTGAGAAACGAGTGGGAT 12404 28 100.0 32 ............................ AAAAATGGCGTTTGAATCCGCAAATGTTTGAT 12344 28 100.0 32 ............................ TACGACTTTGTATGTAAATGATGATGAAACAC 12284 28 100.0 32 ............................ GTAATGCAGTCATTACGCCTTTCTAGTCTTAA 12224 28 100.0 32 ............................ AATTTGTCCAACCCGGTACGTTAATTGGTTTT 12164 28 100.0 32 ............................ AAATGCTTGGTAATGGTGCTGTGACTGGTGAT 12104 28 100.0 32 ............................ ATTAAACCAATGGTGATTATCAAGACTGCGAA 12044 28 100.0 32 ............................ TTTAATACTCTAATTGCCTTTTCGACTTCATA 11984 28 100.0 32 ............................ TTGAACACCAACAAAGAGAGGTAATTCATCAA 11924 28 100.0 32 ............................ AACCCTTCAAAATCAGCAATTAAATACATACT 11864 28 100.0 32 ............................ TTAATCTGAACGTAAGGTTCATAGGCTGAATC 11804 28 100.0 32 ............................ ATAAGGACGTGTGATGTGATAATGACAACCGA 11744 28 100.0 32 ............................ TAATGTTGTCAATAGCCGTACTTTTAGCGGTT 11684 28 100.0 32 ............................ TTGAGCAATTTTTTCGGCTTGCGCATCGTCAT 11624 28 100.0 32 ............................ AGAATCTGGTCCAGATGTTTTCGCTCATTTTA 11564 28 100.0 32 ............................ AGAATCTGGTCCAGATGTTTTCGCTCATTTTA 11504 28 100.0 32 ............................ TGTGTCCGCAACCAGTGTTTCACGGATAATCG 11444 28 100.0 32 ............................ GACAGTAAAAGTTAAACCCTTGCCATTTATGC 11384 28 100.0 32 ............................ TAAAGAGTGCTTAACTCGATATGATGATTTTT 11324 28 100.0 32 ............................ AGTAAAACAGGGTGATTTCTCACCCTAAAATT 11264 28 100.0 32 ............................ TAATACACCCATTGGAAGATTGACTTCCTCTG 11204 28 100.0 32 ............................ AATGCAGGGGGTAGACCATGTCTCCAGAACAA 11144 28 100.0 32 ............................ ATAGGCACGTTGAACAATTGCAGATTCAATTC 11084 28 100.0 32 ............................ AGAGTAAAAACAATGAAGCGGATAATGCACAA 11024 28 100.0 32 ............................ TTATCAAGATTTTCAATATTCTTGCAGGTTTT 10964 28 100.0 32 ............................ AATCAACCATTAAAAAGGTTGTAAAAGATATG 10904 28 100.0 32 ............................ AATAGCACAGGCAATTATACAAACTGAAAGTG 10844 28 100.0 33 ............................ ATTTACATAGTTCAGCTTAGTGATTAATTGGTA 10783 28 100.0 32 ............................ TACCAATATTTGGGATGATGGTACATTTACTT 10723 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 35 28 99.9 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : GTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTAT # Right flank : AATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 19798-16947 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBX010000020.1 Acinetobacter bereziniae strain KCJ3K360 NODE_20_length_34745_cov_14.116153, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 19797 28 100.0 32 ............................ TTTAAACTCAACCTCAGCACGACACCAAGGAC 19737 28 100.0 32 ............................ ACAAAAGCAGTATTCACAACAACCAGTTCAAA 19677 28 100.0 32 ............................ AAACCGTATGACACGCAAATTAGCGCAAATTA 19617 28 100.0 32 ............................ GTTTAGCCACTTTTGACAATCAGACTGCTTGA 19557 28 100.0 32 ............................ GACATAGAGCCTTTGATATATATGGAATTACA 19497 28 100.0 32 ............................ TTTTACTTTAATATTTCCAGTGATTCTTTTTT 19437 28 100.0 32 ............................ TCTAATCATGAAACTTGGTGCGAAATTGCCAT 19377 28 100.0 32 ............................ TGATTACTAAAAAAAGGAGCCTGGATAAGGCT 19317 28 100.0 32 ............................ TACTGGATGCCCTAGCGGTTATACAAGTGGTT 19257 28 100.0 32 ............................ TAACTTTACCCCTAATGTTGTCAATGCTCGTA 19197 28 100.0 32 ............................ TTAATGTGCCCGGCTGGACAAACTGGAACGTA 19137 28 100.0 32 ............................ AAGTTTTTTCGTGAAGTTCTTGTTGTTCAATT 19077 28 100.0 32 ............................ GGCTTCGCCCTGGCTAAACAATAATGATATAA 19017 28 100.0 32 ............................ GTCGCCATTTGTATCAACGTTTGGTTTGGGTT 18957 28 100.0 32 ............................ AGCTTCAAGCACCATGTACTTTCCTGCATTTT 18897 28 100.0 32 ............................ AGTTGAAGCAAAATTATGTTGATCGAGTTTCA 18837 28 100.0 32 ............................ TGCTGATGCGCTTGCATTTATCAAGCTATATA 18777 28 100.0 32 ............................ TAAACGTCTTGAATTTACACATGCATCCGTAA 18717 28 100.0 32 ............................ TTTAGACGTTCTTTTATCACCATCGACATATT 18657 28 100.0 32 ............................ AGAATCTGGAAGTATTTTAGGGAATTTTGGAA 18597 28 100.0 32 ............................ ATCAGCAATTTGCAGACAGCAGTAATATTGTT 18537 28 100.0 32 ............................ TTGTTATTTACAATTTTGTACTCTTCTGGAAC 18477 28 100.0 32 ............................ TAACAAGCCTTATGATCAGGAAGATATTCAGA 18417 28 100.0 32 ............................ AAGGCGCTTAAAGAGCAAAGACAATTTTCTTT 18357 28 100.0 32 ............................ AATGTGATTTGTAATTTATATCGTATTACATA 18297 28 100.0 32 ............................ TATAGAGCTATTGAACACGGCGATACATTCCA 18237 28 100.0 33 ............................ TGACCGTTTAATTTTTTAGCCTTCTCGGCTTCA 18176 28 100.0 32 ............................ TTGAACGGATTTAACTTTAGTTGGATTATTGC 18116 28 100.0 32 ............................ TTTATACGGCATCCAATACCCATCCAACCAAT 18056 28 100.0 32 ............................ TTAACGGCGAGATCGACGAGACTGTACGCTTC 17996 28 100.0 32 ............................ TCATCAATGATCACTTTACCTTGTAAACCGCG 17936 28 100.0 32 ............................ TTGAACCAAACCGTAAATAGCTGCGCCTGCTA 17876 28 100.0 32 ............................ TGCTGCGAATACAAATGTAGGCGTCATAGCAA 17816 28 100.0 33 ............................ TAGCAACTGGCAACCAAAATCTAAAGCATGAAT 17755 28 100.0 33 ............................ ATCCACTCCCATTCGATAGATGCTGATCTGCCT 17694 28 100.0 32 ............................ AAAGCTTCTGTGTCTTCACAAGGCGTTATTAC 17634 28 100.0 32 ............................ AATTAAGGGAATAAGTAGGATAGCAAAGAGTT 17574 28 100.0 32 ............................ CAAATCAAACATTAGTACCTGTCTCAGACACA 17514 28 100.0 32 ............................ TGTCTGAAGCAATAAGTAGTTATATTCAGAAT 17454 28 89.3 32 .......A..G......T.......... TTCTCAAATTCAATCCATTTGTTATTTAGGGC 17394 28 89.3 32 .......A..G......T.......... ATATCGGGAACGTACCTGAATTTGAGCTTGAA 17334 28 89.3 32 .......A..G......T.......... AGTAAAACTATTGGTAATTGAACTGGACAGCG 17274 28 89.3 32 .......A..G......T.......... AGTAAAACTATTGGTAATTGAACTGGACAGCG 17214 28 89.3 32 .......A..G......T.......... TAACTTGAAATCAGAATTGCTTGCAAAGTAGT 17154 28 89.3 32 .......A..G......T.......... ATCCTCTTCGTAAATATCAAAACCAATTCTTA 17094 28 89.3 32 .......A..G......T.......... TGCAGAAGACTATATAGACAAAACTGTCGATA 17034 28 89.3 32 .......A..G......T.......... TTGCTAACGTTTTGAATTGCCGAAAAGTCTGA 16974 28 67.9 0 .......A..GT...AATCC....A... | ========== ====== ====== ====== ============================ ================================= ================== 48 28 97.5 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : TTGAATATAAGAAAATGGTTAGATCGGTTTCCTGATTATGTGCATATCACAGGTGTACGTCCTGTTCCTGAAAAAGTAACGGCTTACGCAGTTTATAAACGTAAGCAAGTTAAAACCAACGCTGAACGTTTGGCTCGCCATCGAGTCAAAAGAGGAGATATTGGCTTTGATGAAGCATTGAGCCGTTATCTTCAAGTGGTGACAACAACTGATTTACCTTATGTCCAAATGCTAAGTTTAAGTACATCGGATGAACAAGATAAAAAGCGTTTTAAGCTATTTATAGAAAAGCAGATCACTGAAAAATCTGAAACTCAGGTTTTTAGAACATATGGGTTAAGTTCTGTGTCTACAGTACCCGAGTTTTAACCCAATATTTTTTCACTCTTTAACAGTCTAATTAAATCAATAAGTTATGGTGGTGGGTTGAAACTTTGGTCTTTTGTAGATTTTTAGTCTTAACTCACTGTTATAACTTTATTTTTTGTTTTAAAATTACT # Right flank : TATAAACGCCTTAACATCTTCGCTAAATTTAGGAAAGTACAAACGATATGGAATAATTTTTATAGTAAATAAAAGATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 113-2544 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBX010000358.1 Acinetobacter bereziniae strain KCJ3K360 NODE_358_length_2618_cov_16.966409, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 113 28 100.0 32 ............................ ATTAACAATTATCGATACTGATGAAAATAAAA 173 28 100.0 32 ............................ GGTTTCGCCCTGGCTAAACAATAATGATATAA 233 28 100.0 32 ............................ GCTAGGGCATCCAGTGGGAGGCTTATCGCAAT 293 28 100.0 32 ............................ ATGTATTCATAACTACCTCAAGTCGCATCTAA 353 28 100.0 32 ............................ AACACCAATTTTGTTGCGAAAGCGTTGAAACC 413 28 100.0 32 ............................ TGTTAAGCGAGGATAATCTACGACCTGAATTT 473 28 100.0 32 ............................ ACAGTTTCAAAAGCGCACTGAATGAATTCTTG 533 28 100.0 32 ............................ ACCAACCGACGGTTGTAAAAACGGTGAAGCAT 593 28 100.0 32 ............................ TATTAATCAATTGCTTATTAAGTTCAATGCAT 653 28 100.0 32 ............................ TAAGTTTTGACTTTTTTTAATGCGTAATATGA 713 28 100.0 32 ............................ AAAGACATTGTAATCTACAAGTCGGAACGTTT 773 28 100.0 32 ............................ TGTAGGGGTTAAGACTTCGATTTTATCTTGAT 833 28 100.0 32 ............................ CAAATGATTATGTGTTTACAGTAAAAGCTGAA 893 28 100.0 33 ............................ ATTTCGATCAGTTACAGGTTCACTCTGCATACA 954 28 100.0 32 ............................ TATCCATTGGCACTATATCAACGTAATCTATA 1014 28 100.0 32 ............................ TGACACATATGACCCCGAATTGCCAAGTTTAG 1074 28 100.0 32 ............................ AGCAACAGGATCAATGATAACCGCATTAGCAC 1134 28 100.0 32 ............................ TAGTGGTGTTGGTATTTCTTACAGAGAAGTAG 1194 28 100.0 32 ............................ ATATAGCCGAATGCTGTAATACCAAACTTGGC 1254 28 100.0 32 ............................ TGTTTCTAAAATTTGTAATGATTCACAAATGA 1314 28 100.0 32 ............................ TTAAACAATGGAAAAACCATTTATCACCTCAT 1374 28 100.0 32 ............................ GTGAGTGTCGTTAATTCGGTCTACAATCTCAT 1434 28 100.0 32 ............................ AAACACTCCTTATCCTGATAATGTAACTCCAC 1494 28 100.0 32 ............................ ATCCTGCACCTTCTACAATTCCATAGATAACT 1554 28 100.0 32 ............................ GATCTCGTTTGATTTTGTGGTTTCTTTCATAA 1614 28 100.0 32 ............................ TTTCAGACGATGTTCTCTTGAACCTGATTTCA 1674 28 100.0 32 ............................ ACAGCACCAGTTTGCAACATCATTAACTGCCA 1734 28 100.0 32 ............................ TTGTGAACAGATCTAATATTGTAGTAGCTGCG 1794 28 100.0 33 ............................ AACCACGCCGTTTTCATTGAAATCGCCATAGCT 1855 28 100.0 32 ............................ ATATCTGCTGTGCTAACTGTGCTTTCTCGTTG 1915 28 100.0 32 ............................ AATATAATATCCTGTCGTGAAATTGACATGAT 1975 28 100.0 32 ............................ TTGTGAACAGATCTAATATTGTAGTAGCTGCG 2035 28 100.0 33 ............................ AACCACGCCGTTTTCATTGAAATCGCCATAGCT 2096 28 100.0 32 ............................ CAGCGATGCCAATGCTCTACAAATCGGATTAA C [2102] 2157 28 100.0 33 ............................ CGATGCTAGGTGTGGATTGGGGGGTTTAGTACA 2218 28 100.0 32 ............................ GCTAATTTGCATAAGGTTTTATTTATCACTGA 2278 28 100.0 32 ............................ GAAGGGGCTAACTTTTTAAGCTGCATTAGCAC 2338 28 100.0 32 ............................ AGACTCTAAATCATGCGGTTGAACAGGCTTTG 2398 28 100.0 32 ............................ ATTGTGGTAAAAATTAACTTAAATTTGATTTT 2458 28 92.9 32 ...........C......T......... ATGTCAACACATGTATTACTGGAAGTCTAAGA 2518 27 78.6 0 ...............A..C.-..T.T.T | ========== ====== ====== ====== ============================ ================================= ================== 41 28 99.3 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : TTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATAG # Right flank : GTGCTAAATAGAATGTTTATTTTTACTTGATTATTTAGATAATATTTATAAAAGTCGTTAATCGATTTTTATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [86.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //