Array 1 67902-69090 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGLB010000023.1 Atlantibacter hermannii strain 4928STDY7071316, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 67902 29 100.0 32 ............................. TTTTAAAACAGGATGTGGCCCGCCTGGTGCTG 67963 29 100.0 32 ............................. CAGTGCGGACTGCTGATCGCTTAGTTGATCTG 68024 29 100.0 33 ............................. AGGTCGGGCATAGTTATTACGACCCGTCCAGCC 68086 29 96.6 32 ............................A TTTATGATCGGTGATATCACGGCCTGGCGAGC 68147 29 100.0 32 ............................. TTTTTGCTGATGCTGATGATATTGAGGCCCAC 68208 29 100.0 32 ............................. AGGCAACTATGGAGCTACACGGCGTTAAAACG 68269 29 100.0 32 ............................. ACACACGGCAACGGGGCGGTTTTAGCTGAACG 68330 29 100.0 32 ............................. TTGATTTAGAGCAACTTTTGTATCTGCCAATG 68391 29 100.0 32 ............................. GCAACCCGTGGCGTCGTCCATATTCATGAACA 68452 29 100.0 32 ............................. GCGAATATTCAGGTTAATGCGCTGCCGTTTCG 68513 29 100.0 32 ............................. GTAAATATCATGGCTGAGAAATTATTCGGCAC 68574 29 100.0 32 ............................. GTTTTTACACGTCCAGCGACGCACACGCACAA 68635 29 100.0 32 ............................. TGACCGATTCGGCAGGGACAATGAAGCAGGGC 68696 29 100.0 32 ............................. GTGACACGTCAACCGGTGTCACCTAGCACAGT 68757 29 100.0 32 ............................. ACGGAAATATTAGACCCGTGGCGATTAGCTGA 68818 29 100.0 32 ............................. GATCGGAATATAGTCAGTGCCATCCTCCGTGG 68879 29 100.0 32 ............................. CCCCGGTCACGGAACCGTCACTGGCTGCGGCG 68940 29 100.0 32 ............................. TTTTAACGGGTTTTATTGACCAGACTCCTATC 69001 29 100.0 32 ............................. CGCTCGCACTCTATTGGCGTAAGGCGACGCAC 69062 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 20 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TCTGATAGAGGATGTCTTAGCTGCAGGTGAGATCGCGCCACCTGAACCACCGCCCGATGCACAACCCGTGGCAATTCCACTTCCAGTGTCGCTCGGCGACGCAGGGCACCGGAGCGCATGATATGAGCATGCTGGTGGTTGTAACAGAAAACGTACCGCCACGGCTGAGAGGTCGTATGGCGATATGGTTACTGGAAGTTAGGGCAGGGGTCTATGTGGGTGATGTTTCTACGCGTATCCGGGAAATGATATGGCAGCAGATAACATCACTGGCCGATGAGGGAAATGTTGTTATGGCTTGGGCAACTAATACTGAATCAGGCTTTGAATTTCAAACCTGGGGAAAAAATCGACGTGTTCCGGTAGATTTCGACGGGCTGCGTTTAGTCACGTTTCTGCCCGTTAATAATCAATAAGTTAGCGTTCTTTAAAAAAATGGAAAAGTTGGTGGTTTTTTTAATGGCAAAAAAATCTATATAATACAGATGTATAGCTTTAGA # Right flank : CCTTTTCCCACGGCCATGTTTTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 20658-19044 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGLB010000032.1 Atlantibacter hermannii strain 4928STDY7071316, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 20657 28 96.6 32 -............................ CCTTTTCTCACGGCTATGTTTTCGGCACTGGA 20597 29 100.0 32 ............................. AACCCGTTTGATGGCATCGACTTTCTGAAGAA 20536 29 100.0 32 ............................. GCTATCGACATTAATGCCCAGCGCTTTTGCAT 20475 29 100.0 32 ............................. CGCTTTCCTCCCTGCATAAATTGCAGGTAACA 20414 29 100.0 32 ............................. CCATTACTTCGCGGTACTCAGAAAATAATTAA 20353 29 100.0 32 ............................. TTCAGGAATGATTTTTTTCCACCGCGTGACGG 20292 29 100.0 32 ............................. CAAACCGGGAATTTTCACCCAACGCAAAAGCC 20231 29 100.0 32 ............................. GGCTTTCTGGTTTTACCGGGGCCCTGCCTAAC 20170 29 100.0 32 ............................. CTCAGCATCTGGCGTTTTCTTCATGGGTAAAC 20109 29 100.0 32 ............................. GACTCCAAAGAGTTTGCCGGCCACATTAAAGA 20048 29 100.0 32 ............................. ATACCCTTGCCCGGTTGATGCGTCGGTGAATA 19987 29 100.0 32 ............................. GCAGAAGACGGCCATCGGACAGCGCCGCCGTC 19926 29 100.0 32 ............................. CCTATTGAACGCGCGTTCGGCGTGGGTGGACT 19865 29 100.0 32 ............................. CGCTGACGTTTTAATGCTCGTCCACCCATCTT 19804 29 100.0 32 ............................. ACGTCGCCACTTCGCGCCGTATGGGTTTGGTA 19743 29 100.0 32 ............................. CGGCGCGGCTTATACAGCAGGAGCTACAGAAA 19682 29 100.0 32 ............................. TGATAACGCTTAGAAAGGCCGGAATAACCATA 19621 29 100.0 32 ............................. CGATTAAATGTCCAGCTTGTCCCTGGTTGTCG 19560 29 100.0 32 ............................. CAATCGGCATTGTGCAAAGTGACAGAATCAGT 19499 29 100.0 32 ............................. TCAGAGTTTGATCGGGCGCAAGCCGCCGCCAA 19438 29 100.0 32 ............................. CTCATGCTCTTTCTCGGATTGCTCATCGACCC 19377 29 96.6 32 A............................ CCCTATCGTTTTGCCGGTGCGTGCTGGCCCAA 19316 29 100.0 32 ............................. CTCCGGGTAGGCGATCATCCGTATCTTGCCTG 19255 29 100.0 32 ............................. TCATAATGGCTGAAGGGGATTGCGAGCCGTGT 19194 29 100.0 32 ............................. AAATCATGTGCCGCGCCGTTGGCGACACATCC 19133 29 100.0 32 ............................. AAGGGACGCCGCTGGCTGGTGGATGAATCCGC 19072 29 93.1 0 ..............C.....A........ | ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : | # Right flank : AACATCTCAAGCCGCCCCCACATCCCCCAGCCATCACACCCTTTGTTTCTTACTCGCACCCGGTATAAACTTCTAAAACCTTCCATCTAAAGGAAGGTTGCGGAGGTAATATGAATATAAGTGATGTCGCGAAAAAAACCGGGTTAACCAGTAAGGCGATTCGTTTTTATGAAGAGAAAGGGCTGGTGACGCCGCCGCTGCGCAGTGAAAACGGTTATCGCAGTTACACGCAAAGCCACCTTGATGAGTTAACGCTGCTGCGCCAGGCGCGCCAGGTGGGGTTTAATCTCGAAGAGTGCAAAGAGCTGGTCCATCTGTTTAACGATCCCGATCGCCGAAGTGCCGATGTAAAAGCGCGTACGCTGCAAAAAGTGGCGGAGATCGAACGGCATATCGTAGAGCTTAACGACATGCGCGCACAGCTGCTGGCGCTCGCGGAATCGTGCCCGGGTGATGACGGCGCCGACTGTCCTATCATGGATAACCTGTCCGGCTGCTGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //